Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08895

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
1,679,686	+	gndA	LU632_RS08890	0.64	-0.6
1,679,881	+	gndA	LU632_RS08890	0.78	+1.4
1,679,881	+	gndA	LU632_RS08890	0.78	+0.8
1,680,031	+	gndA	LU632_RS08890	0.89	-1.1
1,680,031	+	gndA	LU632_RS08890	0.89	+0.4
1,680,035	+	gndA	LU632_RS08890	0.89	-1.2
1,680,142	-				+0.4
1,680,201	+				-1.2
1,680,942	+				+1.4
1,680,964	+				+1.6
1,680,965	-				+3.4
1,681,059	+				-0.7
1,681,059	+				+0.8
1,681,060	-				-0.2
1,681,060	-				+0.1
1,681,060	-				+2.5
1,681,060	-				-0.1
1,681,135	-				-0.2
1,681,135	-				+0.1
1,681,178	-				+0.2
1,681,178	-				-0.9
1,681,230	-				-1.7
1,681,233	-				+1.1
1,681,243	-				-1.2
1,681,247	+				+0.3
1,681,247	+				+0.5
1,681,247	+				-0.7
1,681,248	-				-0.3
1,681,249	+				+1.4
1,681,250	-				-2.0
1,681,250	-				-1.2
1,681,250	-				+1.0
1,681,260	+				-0.8
1,681,337	+				-0.0
1,681,386	+				+0.0
1,681,457	+				-1.4
1,681,457	+				+1.7
1,681,460	-				+0.5
1,681,469	-				+0.4
1,681,497	-				-2.4