Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS08305

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
1,561,147	-				-0.3
1,561,174	-				+0.2
1,561,181	+				+0.3
1,561,181	+				-1.4
1,561,182	-				+0.4
1,561,233	+	arsC	LU632_RS08300	0.16	-0.2
1,561,284	+	arsC	LU632_RS08300	0.31	-1.5
1,561,284	+	arsC	LU632_RS08300	0.31	-0.7
1,561,284	+	arsC	LU632_RS08300	0.31	-1.1
1,561,285	-	arsC	LU632_RS08300	0.31	+1.0
1,561,285	-	arsC	LU632_RS08300	0.31	-0.5
1,561,428	-	arsC	LU632_RS08300	0.71	+0.1
1,561,429	+	arsC	LU632_RS08300	0.71	+0.2
1,561,430	-	arsC	LU632_RS08300	0.72	-0.9
1,561,430	-	arsC	LU632_RS08300	0.72	-1.6
1,561,467	+	arsC	LU632_RS08300	0.82	-0.7
1,561,510	+				+2.4
1,561,511	-				-0.7
1,561,511	-				-1.0
1,561,511	-				+1.2
1,561,529	+				-0.7
1,561,529	+				-0.0
1,561,529	+				+1.2
1,561,529	+				+0.2
1,561,529	+				-1.7
1,561,529	+				-2.4
1,561,529	+				-0.2
1,561,530	-				+1.4
1,561,530	-				-0.9
1,561,654	+				+0.2
1,561,660	-				-1.4
1,561,686	+				+1.7
1,561,797	+		LU632_RS08305	0.17	+0.1
1,561,797	+		LU632_RS08305	0.17	+1.1
1,561,797	+		LU632_RS08305	0.17	-0.9
1,561,797	+		LU632_RS08305	0.17	-0.9
1,561,797	+		LU632_RS08305	0.17	+1.1
1,561,797	+		LU632_RS08305	0.17	+0.0
1,561,797	+		LU632_RS08305	0.17	+1.0
1,561,797	+		LU632_RS08305	0.17	-0.0
1,561,797	+		LU632_RS08305	0.17	-0.1
1,561,797	+		LU632_RS08305	0.17	+0.9
1,561,798	-		LU632_RS08305	0.17	+1.4
1,561,798	-		LU632_RS08305	0.17	-0.4
1,561,798	-		LU632_RS08305	0.17	+0.3
1,561,798	-		LU632_RS08305	0.17	+0.7
1,561,914	+		LU632_RS08305	0.25	+1.0
1,561,915	-		LU632_RS08305	0.26	-0.6
1,561,915	-		LU632_RS08305	0.26	-0.4
1,561,943	-		LU632_RS08305	0.27	+0.9
1,561,943	-		LU632_RS08305	0.27	+0.0
1,561,943	-		LU632_RS08305	0.27	-0.0
1,561,943	-		LU632_RS08305	0.27	+0.5
1,562,054	-		LU632_RS08305	0.35	+0.7
1,562,117	-		LU632_RS08305	0.39	+0.9
1,562,150	+		LU632_RS08305	0.42	-0.9
1,562,150	+		LU632_RS08305	0.42	+0.5
1,562,150	+		LU632_RS08305	0.42	+0.4
1,562,150	+		LU632_RS08305	0.42	+1.0
1,562,151	-		LU632_RS08305	0.42	-1.6
1,562,151	-		LU632_RS08305	0.42	-0.3
1,562,292	+		LU632_RS08305	0.51	-0.4
1,562,292	+		LU632_RS08305	0.51	+0.3
1,562,293	-		LU632_RS08305	0.51	-0.9
1,562,371	+		LU632_RS08305	0.57	-1.1
1,562,421	+		LU632_RS08305	0.60	+0.3
1,562,422	-		LU632_RS08305	0.60	+0.4
1,562,779	-		LU632_RS08305	0.85	+0.1
1,562,780	+		LU632_RS08305	0.85	-1.9
1,562,780	+		LU632_RS08305	0.85	-1.5
1,562,780	+		LU632_RS08305	0.85	+0.7
1,562,780	+		LU632_RS08305	0.85	+0.1
1,562,780	+		LU632_RS08305	0.85	-0.1
1,562,781	-		LU632_RS08305	0.85	-0.1
1,562,784	+		LU632_RS08305	0.85	+1.3
1,562,784	+		LU632_RS08305	0.85	-0.5
1,562,785	-		LU632_RS08305	0.85	-1.5
1,562,837	+		LU632_RS08305	0.89	+1.2
1,562,899	-				+0.3
1,562,936	-				+1.4
1,563,052	-				+1.4
1,563,070	+				-0.4
1,563,071	-				-2.0
1,563,071	-				-0.6
1,563,071	-				-0.5
1,563,071	-				+1.2
1,563,072	+				+0.7
1,563,072	+				-1.1
1,563,072	+				+0.3
1,563,073	-				-0.9
1,563,073	-				-0.4
1,563,073	-				+0.8
1,563,073	-				+1.4
1,563,073	-				+0.9
1,563,267	-				+0.6
1,563,300	-				+0.7
1,563,313	+				+0.3
1,563,427	-				-0.2
1,563,728	-				-1.1
1,563,731	-				-0.1
1,563,735	+				-0.1
1,563,737	+				-1.1
1,563,738	-				+0.6