Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07060

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
1,339,795	+		LU632_RS07050	0.64	-0.3
1,339,795	+		LU632_RS07050	0.64	+0.9
1,339,796	-		LU632_RS07050	0.64	+1.1
1,340,086	+				+0.7
1,340,086	+				+1.4
1,340,086	+				-0.8
1,340,086	+				+0.1
1,340,086	+				+0.1
1,340,086	+				-0.4
1,340,086	+				+1.5
1,340,086	+				-0.2
1,340,086	+				-1.3
1,340,087	-				+0.2
1,340,087	-				-0.7
1,340,087	-				+0.4
1,340,087	-				-0.2
1,340,087	-				+1.0
1,340,087	-				-0.2
1,340,087	-				+0.6
1,340,087	-				+4.2
1,340,088	+				+1.0
1,340,089	-				-1.2
1,340,102	-				-0.7
1,340,159	+				+0.0
1,340,159	+				+1.4
1,340,209	+		LU632_RS07055	0.19	-0.2
1,340,212	+		LU632_RS07055	0.19	-0.2
1,340,212	+		LU632_RS07055	0.19	-0.0
1,340,339	+		LU632_RS07055	0.41	-0.3
1,340,339	+		LU632_RS07055	0.41	+1.6
1,340,339	+		LU632_RS07055	0.41	-0.8
1,340,339	+		LU632_RS07055	0.41	+1.7
1,340,339	+		LU632_RS07055	0.41	+1.1
1,340,340	-		LU632_RS07055	0.41	-1.1
1,340,340	-		LU632_RS07055	0.41	+0.9
1,340,340	-		LU632_RS07055	0.41	-1.4
1,340,371	+		LU632_RS07055	0.47	-0.5
1,340,371	+		LU632_RS07055	0.47	+2.4
1,340,371	+		LU632_RS07055	0.47	+1.9
1,340,464	+		LU632_RS07055	0.63	+0.6
1,340,464	+		LU632_RS07055	0.63	-0.0
1,340,465	-		LU632_RS07055	0.63	+0.9
1,340,466	+		LU632_RS07055	0.63	-1.0
1,340,619	+		LU632_RS07055	0.90	-0.2
1,340,713	+		LU632_RS07060	0.21	-1.1
1,340,713	+		LU632_RS07060	0.21	+1.8
1,340,737	+		LU632_RS07060	0.34	-0.9
1,340,784	+		LU632_RS07060	0.60	-0.4
1,340,784	+		LU632_RS07060	0.60	+1.5
1,340,784	+		LU632_RS07060	0.60	-1.1
1,340,784	+		LU632_RS07060	0.60	-0.9
1,340,784	+		LU632_RS07060	0.60	-2.8
1,340,785	-		LU632_RS07060	0.61	+2.2
1,340,785	-		LU632_RS07060	0.61	-0.3
1,340,785	-		LU632_RS07060	0.61	-0.1
1,340,785	-		LU632_RS07060	0.61	-0.0
1,340,785	-		LU632_RS07060	0.61	-0.3
1,340,785	-		LU632_RS07060	0.61	-1.2
1,340,791	+		LU632_RS07060	0.64	-0.6
1,340,819	+		LU632_RS07060	0.79	-1.6
1,340,820	-		LU632_RS07060	0.80	-2.2
1,340,878	-				+0.2
1,341,006	+		LU632_RS07065	0.20	-2.3
1,341,006	+		LU632_RS07065	0.20	-0.6
1,341,006	+		LU632_RS07065	0.20	+0.1
1,341,006	+		LU632_RS07065	0.20	-0.9
1,341,006	+		LU632_RS07065	0.20	-0.5
1,341,006	+		LU632_RS07065	0.20	+0.7
1,341,006	+		LU632_RS07065	0.20	-0.1
1,341,006	+		LU632_RS07065	0.20	-0.6
1,341,006	+		LU632_RS07065	0.20	-2.1
1,341,006	+		LU632_RS07065	0.20	+1.9
1,341,006	+		LU632_RS07065	0.20	-0.6
1,341,006	+		LU632_RS07065	0.20	-1.4
1,341,007	-		LU632_RS07065	0.20	-1.1
1,341,009	-		LU632_RS07065	0.20	+2.7
1,341,015	-		LU632_RS07065	0.21	+1.3
1,341,048	-		LU632_RS07065	0.25	-1.4
1,341,048	-		LU632_RS07065	0.25	-1.1
1,341,166	-		LU632_RS07065	0.40	-1.1
1,341,221	+		LU632_RS07065	0.47	-0.7
1,341,249	+		LU632_RS07065	0.51	+1.5
1,341,287	-		LU632_RS07065	0.55	-0.2
1,341,356	-		LU632_RS07065	0.64	+0.4
1,341,398	+		LU632_RS07065	0.70	+1.5
1,341,398	+		LU632_RS07065	0.70	+0.4
1,341,465	+		LU632_RS07065	0.78	-0.8
1,341,466	-		LU632_RS07065	0.78	-0.8
1,341,492	+		LU632_RS07065	0.82	-0.9
1,341,506	+		LU632_RS07065	0.83	-2.1
1,341,647	-				+0.3
1,341,696	+				+0.4
1,341,700	+				+1.4
1,341,700	+				-0.5
1,341,700	+				-0.4
1,341,700	+				+0.8
1,341,701	-				+0.4
1,341,701	-				+0.7
1,341,701	-				-1.4
1,341,704	+				-0.3
1,341,705	-				-1.8
1,341,705	-				-0.2
1,341,705	-				-1.6
1,341,705	-				-1.4
1,341,779	-				+2.7
1,341,779	-				+0.4
1,341,779	-				+1.2
1,341,807	+				-1.2
1,341,808	-				-0.6
1,341,808	-				-2.1