Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS00525

Experiment: plant=Melon; plant sample=MP1; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Melon; plant sample=MP1; plant location=NA
106,683	+		LU632_RS00520	0.25	-2.4
106,684	-		LU632_RS00520	0.26	+0.4
106,684	-		LU632_RS00520	0.26	+0.4
106,738	+		LU632_RS00520	0.30	+0.7
106,752	+		LU632_RS00520	0.31	-1.1
106,758	+		LU632_RS00520	0.32	-0.2
106,774	+		LU632_RS00520	0.33	+0.1
106,793	+		LU632_RS00520	0.35	-0.1
106,793	+		LU632_RS00520	0.35	+0.1
106,794	-		LU632_RS00520	0.35	-0.7
106,794	-		LU632_RS00520	0.35	-1.3
106,862	-		LU632_RS00520	0.40	-0.3
106,927	+		LU632_RS00520	0.46	-0.5
106,927	+		LU632_RS00520	0.46	-0.9
106,928	-		LU632_RS00520	0.46	-1.5
106,931	-		LU632_RS00520	0.46	-0.9
106,992	+		LU632_RS00520	0.51	+0.7
106,992	+		LU632_RS00520	0.51	-0.3
107,011	+		LU632_RS00520	0.53	-0.6
107,011	+		LU632_RS00520	0.53	-1.2
107,012	-		LU632_RS00520	0.53	-0.1
107,060	-		LU632_RS00520	0.57	+0.3
107,062	+		LU632_RS00520	0.57	-2.5
107,065	+		LU632_RS00520	0.57	-0.5
107,065	+		LU632_RS00520	0.57	-0.8
107,134	+		LU632_RS00520	0.63	+1.3
107,236	-		LU632_RS00520	0.71	+1.1
108,250	-		LU632_RS00525	0.51	-0.3
108,373	+		LU632_RS00525	0.61	+0.6
108,453	-		LU632_RS00525	0.68	-1.7
108,529	+		LU632_RS00525	0.74	+1.5
108,549	+		LU632_RS00525	0.76	+0.4
108,702	-		LU632_RS00525	0.89	+0.1
108,741	-				-0.2
108,750	-				-0.2
108,912	+				+0.3
109,312	+				-0.3