Strain Fitness in Pseudomonas sp. RS175 around PFR28_00995

Experiment: L-Malic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C)
1,081,947	+		PFR28_00994	0.37	-0.7
1,081,948	-		PFR28_00994	0.37	-0.1
1,081,948	-		PFR28_00994	0.37	+0.1
1,081,948	-		PFR28_00994	0.37	-0.1
1,082,005	-		PFR28_00994	0.41	-0.3
1,082,012	+		PFR28_00994	0.42	+1.2
1,082,012	+		PFR28_00994	0.42	-2.5
1,082,012	+		PFR28_00994	0.42	-1.0
1,082,012	+		PFR28_00994	0.42	+0.4
1,082,012	+		PFR28_00994	0.42	-0.8
1,082,012	+		PFR28_00994	0.42	+0.2
1,082,013	-		PFR28_00994	0.42	-0.8
1,082,013	-		PFR28_00994	0.42	-0.1
1,082,052	+		PFR28_00994	0.45	-0.1
1,082,052	+		PFR28_00994	0.45	-0.2
1,082,082	+		PFR28_00994	0.47	+1.9
1,082,083	-		PFR28_00994	0.47	+0.0
1,082,235	+		PFR28_00994	0.59	+1.3
1,082,244	+		PFR28_00994	0.59	-0.0
1,082,244	+		PFR28_00994	0.59	-0.2
1,082,244	+		PFR28_00994	0.59	-0.6
1,082,245	-		PFR28_00994	0.59	-0.4
1,082,245	-		PFR28_00994	0.59	-1.6
1,082,262	+		PFR28_00994	0.61	-0.4
1,082,262	+		PFR28_00994	0.61	-2.1
1,082,262	+		PFR28_00994	0.61	-1.7
1,082,262	+		PFR28_00994	0.61	-0.7
1,082,262	+		PFR28_00994	0.61	+0.3
1,082,262	+		PFR28_00994	0.61	-0.9
1,082,262	+		PFR28_00994	0.61	-2.1
1,082,262	+		PFR28_00994	0.61	-0.5
1,082,262	+		PFR28_00994	0.61	-0.6
1,082,262	+		PFR28_00994	0.61	+0.2
1,082,262	+		PFR28_00994	0.61	+1.3
1,082,262	+		PFR28_00994	0.61	+0.3
1,082,263	-		PFR28_00994	0.61	+0.1
1,082,263	-		PFR28_00994	0.61	+0.5
1,082,263	-		PFR28_00994	0.61	+0.5
1,082,263	-		PFR28_00994	0.61	-0.9
1,082,263	-		PFR28_00994	0.61	+0.6
1,082,263	-		PFR28_00994	0.61	-0.1
1,082,263	-		PFR28_00994	0.61	+1.5
1,082,263	-		PFR28_00994	0.61	+0.7
1,082,296	-		PFR28_00994	0.63	-1.7
1,082,296	-		PFR28_00994	0.63	-0.7
1,082,806	-				-1.6
1,082,806	-				+0.9
1,082,815	+				-1.6
1,082,815	+				-0.4
1,082,815	+				-0.0
1,082,815	+				+0.2
1,082,815	+				-1.7
1,082,815	+				+0.1
1,082,815	+				-0.2
1,082,815	+				-0.2
1,082,815	+				+0.3
1,082,816	-				-0.0
1,082,816	-				-0.3
1,082,816	-				-0.4
1,082,816	-				+0.7
1,082,816	-				+2.4
1,082,816	-				-0.4
1,082,900	+		PFR28_00995	0.15	-1.1
1,082,901	-		PFR28_00995	0.15	-0.7
1,083,012	+		PFR28_00995	0.48	-0.0
1,083,012	+		PFR28_00995	0.48	-1.6
1,083,013	-		PFR28_00995	0.49	-1.3
1,083,252	+		PFR28_00996	0.18	-0.5
1,083,252	+		PFR28_00996	0.18	+0.4
1,083,252	+		PFR28_00996	0.18	-0.8
1,083,252	+		PFR28_00996	0.18	-1.6
1,083,253	-		PFR28_00996	0.18	-0.7
1,083,253	-		PFR28_00996	0.18	-0.4
1,083,253	-		PFR28_00996	0.18	-0.4
1,083,300	+		PFR28_00996	0.30	+0.3
1,083,300	+		PFR28_00996	0.30	+0.2
1,083,300	+		PFR28_00996	0.30	-2.1
1,083,300	+		PFR28_00996	0.30	+0.6
1,083,300	+		PFR28_00996	0.30	+0.2
1,083,300	+		PFR28_00996	0.30	-0.6
1,083,301	-		PFR28_00996	0.30	-2.3
1,083,301	-		PFR28_00996	0.30	-1.7
1,083,301	-		PFR28_00996	0.30	-1.1
1,083,336	+		PFR28_00996	0.39	+2.5
1,083,336	+		PFR28_00996	0.39	-1.6
1,083,336	+		PFR28_00996	0.39	+0.3
1,083,336	+		PFR28_00996	0.39	-0.1
1,083,336	+		PFR28_00996	0.39	-0.3
1,083,337	-		PFR28_00996	0.39	+0.2
1,083,337	-		PFR28_00996	0.39	+0.5
1,083,340	+		PFR28_00996	0.40	-1.2
1,083,340	+		PFR28_00996	0.40	-0.2
1,083,340	+		PFR28_00996	0.40	+0.8
1,083,341	-		PFR28_00996	0.40	+0.5
1,083,341	-		PFR28_00996	0.40	+2.8
1,083,347	+		PFR28_00996	0.42	+0.0
1,083,359	+		PFR28_00996	0.45	-0.3
1,083,359	+		PFR28_00996	0.45	+0.4
1,083,359	+		PFR28_00996	0.45	-0.8
1,083,360	-		PFR28_00996	0.45	-0.4
1,083,378	-		PFR28_00996	0.50	+0.3
1,083,436	+		PFR28_00996	0.65	+0.5
1,083,652	+		PFR28_00997	0.25	-0.6
1,083,652	+		PFR28_00997	0.25	+0.9
1,083,652	+		PFR28_00997	0.25	+0.1
1,083,652	+		PFR28_00997	0.25	+0.0
1,083,652	+		PFR28_00997	0.25	-1.0
1,083,652	+		PFR28_00997	0.25	+0.8
1,083,652	+		PFR28_00997	0.25	+4.0
1,083,652	+		PFR28_00997	0.25	-0.0
1,083,652	+		PFR28_00997	0.25	-0.3
1,083,652	+		PFR28_00997	0.25	-0.9
1,083,652	+		PFR28_00997	0.25	-0.0
1,083,652	+		PFR28_00997	0.25	+3.8
1,083,652	+		PFR28_00997	0.25	-1.3
1,083,653	-		PFR28_00997	0.25	+2.8
1,083,653	-		PFR28_00997	0.25	+0.6
1,083,653	-		PFR28_00997	0.25	+0.5
1,083,653	-		PFR28_00997	0.25	-1.3
1,083,653	-		PFR28_00997	0.25	+0.5
1,083,653	-		PFR28_00997	0.25	-0.1
1,083,653	-		PFR28_00997	0.25	+0.6
1,083,653	-		PFR28_00997	0.25	+0.7
1,083,653	-		PFR28_00997	0.25	+0.8
1,083,653	-		PFR28_00997	0.25	+1.3
1,083,653	-		PFR28_00997	0.25	-0.1
1,083,653	-		PFR28_00997	0.25	+1.1
1,083,656	+		PFR28_00997	0.26	+0.1
1,083,656	+		PFR28_00997	0.26	-1.0
1,083,656	+		PFR28_00997	0.26	+0.2
1,083,656	+		PFR28_00997	0.26	+0.6
1,083,656	+		PFR28_00997	0.26	-1.0
1,083,656	+		PFR28_00997	0.26	-0.5
1,083,656	+		PFR28_00997	0.26	+2.2
1,083,656	+		PFR28_00997	0.26	-1.8
1,083,656	+		PFR28_00997	0.26	-0.1
1,083,656	+		PFR28_00997	0.26	-0.1
1,083,657	-		PFR28_00997	0.26	+1.0
1,083,657	-		PFR28_00997	0.26	-0.6
1,083,657	-		PFR28_00997	0.26	+1.0
1,083,657	-		PFR28_00997	0.26	+0.2
1,083,657	-		PFR28_00997	0.26	+1.6
1,083,657	-		PFR28_00997	0.26	+0.9
1,083,657	-		PFR28_00997	0.26	-0.1
1,083,657	-		PFR28_00997	0.26	+0.1
1,083,657	-		PFR28_00997	0.26	+0.3
1,083,657	-		PFR28_00997	0.26	-0.7
1,083,902	+				+0.2
1,083,902	+				+1.1
1,083,928	+				+0.4
1,083,928	+				-1.6
1,083,928	+				-0.9
1,083,928	+				-0.2
1,083,928	+				-1.1
1,083,964	-				+0.4
1,083,964	-				-0.4
1,084,002	+				-0.1
1,084,002	+				+0.2
1,084,002	+				+0.2
1,084,002	+				+0.9
1,084,002	+				+0.1
1,084,002	+				+1.2
1,084,002	+				-0.5
1,084,002	+				-0.8
1,084,002	+				+0.3
1,084,002	+				+1.3
1,084,002	+				+0.4
1,084,002	+				-1.0
1,084,002	+				+0.6
1,084,002	+				-0.2
1,084,002	+				+0.3
1,084,002	+				+0.2
1,084,002	+				+0.3
1,084,003	-				-0.5
1,084,003	-				+0.1
1,084,003	-				-0.1
1,084,003	-				-0.1
1,084,003	-				-0.4
1,084,003	-				-0.6
1,084,003	-				-1.1
1,084,003	-				+0.1
1,084,003	-				-0.1
1,084,003	-				-0.5
1,084,003	-				+0.7
1,084,003	-				-0.6
1,084,003	-				-0.4
1,084,003	-				+0.7
1,084,003	-				+0.1
1,084,058	+				+0.5