Strain Fitness in Escherichia coli BL21 around ECD_02529

Experiment: Bas29

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02527 and ECD_02528 are separated by 151 nucleotidesECD_02528 and ECD_02529 are separated by 247 nucleotidesECD_02529 and ECD_02530 overlap by 4 nucleotidesECD_02530 and ECD_02531 overlap by 28 nucleotides ECD_02527: ECD_02527 - uncharacterized protein, at 2,639,509 to 2,639,853 _02527 ECD_02528: ECD_02528 - putative membrane-anchored DUF883 family ribosome-binding protein, at 2,640,005 to 2,640,334 _02528 ECD_02529: ECD_02529 - hydrogen donor for NrdEF electron transport system; glutaredoxin-like protein, at 2,640,582 to 2,640,827 _02529 ECD_02530: ECD_02530 - NrdEF cluster assembly flavodoxin, at 2,640,824 to 2,641,234 _02530 ECD_02531: ECD_02531 - ribonucleoside-diphosphate reductase 2, alpha subunit, at 2,641,207 to 2,643,351 _02531 Position (kb) 2640 2641Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2639.586 kb on - strand, within ECD_02527at 2639.609 kb on - strand, within ECD_02527at 2639.613 kb on - strand, within ECD_02527at 2639.613 kb on - strand, within ECD_02527at 2639.689 kb on + strand, within ECD_02527at 2639.690 kb on - strand, within ECD_02527at 2639.690 kb on - strand, within ECD_02527at 2639.690 kb on - strand, within ECD_02527at 2639.716 kb on - strand, within ECD_02527at 2639.744 kb on + strand, within ECD_02527at 2639.744 kb on + strand, within ECD_02527at 2639.744 kb on + strand, within ECD_02527at 2639.745 kb on - strand, within ECD_02527at 2639.745 kb on - strand, within ECD_02527at 2639.745 kb on - strand, within ECD_02527at 2639.745 kb on - strand, within ECD_02527at 2639.745 kb on - strand, within ECD_02527at 2639.745 kb on - strand, within ECD_02527at 2639.750 kb on + strand, within ECD_02527at 2639.751 kb on - strand, within ECD_02527at 2639.774 kb on + strand, within ECD_02527at 2639.774 kb on + strand, within ECD_02527at 2639.788 kb on + strand, within ECD_02527at 2639.803 kb on - strand, within ECD_02527at 2639.803 kb on - strand, within ECD_02527at 2639.821 kb on + strandat 2639.821 kb on + strandat 2639.845 kb on + strandat 2639.846 kb on - strandat 2639.846 kb on - strandat 2639.849 kb on + strandat 2639.849 kb on + strandat 2639.849 kb on + strandat 2639.849 kb on + strandat 2639.849 kb on + strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.850 kb on - strandat 2639.853 kb on + strandat 2639.853 kb on + strandat 2639.854 kb on - strandat 2639.854 kb on - strandat 2639.870 kb on + strandat 2639.870 kb on + strandat 2639.871 kb on - strandat 2639.871 kb on - strandat 2639.871 kb on - strandat 2639.885 kb on + strandat 2639.886 kb on - strandat 2639.886 kb on - strandat 2639.889 kb on + strandat 2639.890 kb on + strandat 2639.890 kb on + strandat 2639.891 kb on - strandat 2639.967 kb on + strandat 2639.979 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.004 kb on + strandat 2640.005 kb on - strandat 2640.075 kb on + strand, within ECD_02528at 2640.075 kb on + strand, within ECD_02528at 2640.075 kb on + strand, within ECD_02528at 2640.096 kb on + strand, within ECD_02528at 2640.096 kb on + strand, within ECD_02528at 2640.148 kb on + strand, within ECD_02528at 2640.149 kb on - strand, within ECD_02528at 2640.149 kb on - strand, within ECD_02528at 2640.196 kb on + strand, within ECD_02528at 2640.196 kb on + strand, within ECD_02528at 2640.268 kb on + strand, within ECD_02528at 2640.269 kb on - strand, within ECD_02528at 2640.269 kb on - strand, within ECD_02528at 2640.295 kb on + strand, within ECD_02528at 2640.296 kb on - strand, within ECD_02528at 2640.296 kb on - strand, within ECD_02528at 2640.296 kb on - strand, within ECD_02528at 2640.315 kb on + strandat 2640.316 kb on - strandat 2640.316 kb on - strandat 2640.349 kb on + strandat 2640.349 kb on + strandat 2640.349 kb on + strandat 2640.349 kb on + strandat 2640.350 kb on - strandat 2640.353 kb on + strandat 2640.469 kb on - strandat 2640.471 kb on - strandat 2640.503 kb on + strandat 2640.593 kb on + strandat 2640.597 kb on + strandat 2640.605 kb on + strandat 2640.758 kb on + strand, within ECD_02529at 2640.758 kb on + strand, within ECD_02529at 2640.758 kb on + strand, within ECD_02529at 2640.759 kb on - strand, within ECD_02529at 2640.759 kb on - strand, within ECD_02529at 2640.788 kb on + strand, within ECD_02529at 2640.788 kb on + strand, within ECD_02529at 2640.839 kb on + strandat 2640.840 kb on - strandat 2640.885 kb on + strand, within ECD_02530at 2640.936 kb on + strand, within ECD_02530at 2640.937 kb on - strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.947 kb on + strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.948 kb on - strand, within ECD_02530at 2640.968 kb on + strand, within ECD_02530at 2640.968 kb on + strand, within ECD_02530at 2641.008 kb on + strand, within ECD_02530at 2641.009 kb on - strand, within ECD_02530at 2641.009 kb on - strand, within ECD_02530at 2641.009 kb on - strand, within ECD_02530at 2641.009 kb on - strand, within ECD_02530at 2641.057 kb on + strand, within ECD_02530at 2641.058 kb on - strand, within ECD_02530at 2641.091 kb on + strand, within ECD_02530at 2641.091 kb on + strand, within ECD_02530at 2641.092 kb on - strand, within ECD_02530at 2641.092 kb on - strand, within ECD_02530at 2641.142 kb on + strand, within ECD_02530at 2641.163 kb on - strand, within ECD_02530at 2641.189 kb on + strand, within ECD_02530at 2641.253 kb on - strandat 2641.282 kb on + strandat 2641.283 kb on - strandat 2641.283 kb on - strandat 2641.283 kb on - strandat 2641.283 kb on - strandat 2641.338 kb on + strandat 2641.339 kb on - strandat 2641.417 kb on + strandat 2641.417 kb on + strandat 2641.418 kb on - strandat 2641.418 kb on - strandat 2641.420 kb on + strandat 2641.420 kb on + strandat 2641.420 kb on + strandat 2641.420 kb on + strandat 2641.420 kb on + strandat 2641.420 kb on + strandat 2641.420 kb on + strandat 2641.420 kb on + strandat 2641.421 kb on - strandat 2641.421 kb on - strandat 2641.421 kb on - strandat 2641.421 kb on - strandat 2641.421 kb on - strandat 2641.421 kb on - strandat 2641.421 kb on - strandat 2641.421 kb on - strandat 2641.421 kb on - strandat 2641.437 kb on + strand, within ECD_02531at 2641.465 kb on - strand, within ECD_02531at 2641.465 kb on - strand, within ECD_02531at 2641.540 kb on + strand, within ECD_02531at 2641.540 kb on + strand, within ECD_02531at 2641.540 kb on + strand, within ECD_02531at 2641.540 kb on + strand, within ECD_02531at 2641.540 kb on + strand, within ECD_02531at 2641.540 kb on + strand, within ECD_02531at 2641.540 kb on + strand, within ECD_02531at 2641.540 kb on + strand, within ECD_02531at 2641.541 kb on - strand, within ECD_02531at 2641.541 kb on - strand, within ECD_02531at 2641.541 kb on - strand, within ECD_02531at 2641.541 kb on - strand, within ECD_02531at 2641.541 kb on - strand, within ECD_02531at 2641.541 kb on - strand, within ECD_02531at 2641.541 kb on - strand, within ECD_02531at 2641.541 kb on - strand, within ECD_02531at 2641.541 kb on - strand, within ECD_02531at 2641.542 kb on + strand, within ECD_02531at 2641.542 kb on + strand, within ECD_02531at 2641.542 kb on + strand, within ECD_02531at 2641.542 kb on + strand, within ECD_02531at 2641.542 kb on + strand, within ECD_02531at 2641.542 kb on + strand, within ECD_02531at 2641.542 kb on + strand, within ECD_02531at 2641.542 kb on + strand, within ECD_02531at 2641.543 kb on - strand, within ECD_02531at 2641.543 kb on - strand, within ECD_02531at 2641.543 kb on - strand, within ECD_02531at 2641.543 kb on - strand, within ECD_02531at 2641.543 kb on - strand, within ECD_02531at 2641.543 kb on - strand, within ECD_02531at 2641.543 kb on - strand, within ECD_02531at 2641.564 kb on - strand, within ECD_02531at 2641.571 kb on - strand, within ECD_02531at 2641.752 kb on + strand, within ECD_02531at 2641.753 kb on - strand, within ECD_02531at 2641.764 kb on + strand, within ECD_02531at 2641.765 kb on - strand, within ECD_02531

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas29
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2,639,586 - ECD_02527 0.22 +0.5
2,639,609 - ECD_02527 0.29 +1.2
2,639,613 - ECD_02527 0.30 +0.3
2,639,613 - ECD_02527 0.30 +1.2
2,639,689 + ECD_02527 0.52 +0.9
2,639,690 - ECD_02527 0.52 -0.4
2,639,690 - ECD_02527 0.52 -1.3
2,639,690 - ECD_02527 0.52 +0.7
2,639,716 - ECD_02527 0.60 -0.1
2,639,744 + ECD_02527 0.68 -0.1
2,639,744 + ECD_02527 0.68 +0.8
2,639,744 + ECD_02527 0.68 -1.7
2,639,745 - ECD_02527 0.68 -0.2
2,639,745 - ECD_02527 0.68 +0.5
2,639,745 - ECD_02527 0.68 -1.4
2,639,745 - ECD_02527 0.68 -1.1
2,639,745 - ECD_02527 0.68 +0.1
2,639,745 - ECD_02527 0.68 +0.8
2,639,750 + ECD_02527 0.70 -0.2
2,639,751 - ECD_02527 0.70 -1.5
2,639,774 + ECD_02527 0.77 -0.4
2,639,774 + ECD_02527 0.77 +1.4
2,639,788 + ECD_02527 0.81 -0.5
2,639,803 - ECD_02527 0.85 -0.1
2,639,803 - ECD_02527 0.85 +0.9
2,639,821 + +0.7
2,639,821 + +0.7
2,639,845 + -0.0
2,639,846 - -0.4
2,639,846 - +0.3
2,639,849 + +0.5
2,639,849 + +0.1
2,639,849 + +0.2
2,639,849 + -0.7
2,639,849 + -0.1
2,639,850 - +0.5
2,639,850 - -0.7
2,639,850 - +0.9
2,639,850 - +0.8
2,639,850 - +0.1
2,639,850 - -0.5
2,639,850 - +1.0
2,639,850 - +0.1
2,639,850 - -1.7
2,639,850 - +0.5
2,639,853 + +0.1
2,639,853 + +0.2
2,639,854 - +0.4
2,639,854 - +0.6
2,639,870 + -2.1
2,639,870 + +0.4
2,639,871 - -0.0
2,639,871 - -0.3
2,639,871 - -0.9
2,639,885 + +0.4
2,639,886 - -0.0
2,639,886 - -1.2
2,639,889 + +0.2
2,639,890 + +0.7
2,639,890 + +0.6
2,639,891 - -0.7
2,639,967 + -1.1
2,639,979 + -1.3
2,640,004 + +0.4
2,640,004 + -0.1
2,640,004 + +0.8
2,640,004 + -0.5
2,640,004 + -0.9
2,640,004 + -0.5
2,640,004 + +0.8
2,640,004 + -0.3
2,640,004 + -0.3
2,640,005 - -0.6
2,640,075 + ECD_02528 0.21 -0.2
2,640,075 + ECD_02528 0.21 +0.4
2,640,075 + ECD_02528 0.21 -0.5
2,640,096 + ECD_02528 0.28 +0.3
2,640,096 + ECD_02528 0.28 +1.9
2,640,148 + ECD_02528 0.43 -0.1
2,640,149 - ECD_02528 0.44 -0.4
2,640,149 - ECD_02528 0.44 -0.3
2,640,196 + ECD_02528 0.58 +0.5
2,640,196 + ECD_02528 0.58 -0.4
2,640,268 + ECD_02528 0.80 +0.2
2,640,269 - ECD_02528 0.80 -2.3
2,640,269 - ECD_02528 0.80 +1.4
2,640,295 + ECD_02528 0.88 +0.6
2,640,296 - ECD_02528 0.88 +0.1
2,640,296 - ECD_02528 0.88 -0.5
2,640,296 - ECD_02528 0.88 -0.5
2,640,315 + +0.2
2,640,316 - +0.1
2,640,316 - +0.2
2,640,349 + -0.4
2,640,349 + -0.0
2,640,349 + +1.0
2,640,349 + +0.5
2,640,350 - -0.1
2,640,353 + +0.9
2,640,469 - +0.7
2,640,471 - -1.1
2,640,503 + +0.5
2,640,593 + -1.0
2,640,597 + -0.4
2,640,605 + -1.5
2,640,758 + ECD_02529 0.72 +1.0
2,640,758 + ECD_02529 0.72 +0.7
2,640,758 + ECD_02529 0.72 +0.3
2,640,759 - ECD_02529 0.72 -0.9
2,640,759 - ECD_02529 0.72 -1.6
2,640,788 + ECD_02529 0.84 -0.4
2,640,788 + ECD_02529 0.84 -0.2
2,640,839 + +1.0
2,640,840 - -0.4
2,640,885 + ECD_02530 0.15 -0.6
2,640,936 + ECD_02530 0.27 +0.1
2,640,937 - ECD_02530 0.27 +0.2
2,640,947 + ECD_02530 0.30 +0.9
2,640,947 + ECD_02530 0.30 -0.4
2,640,947 + ECD_02530 0.30 +0.5
2,640,947 + ECD_02530 0.30 +0.1
2,640,947 + ECD_02530 0.30 -1.0
2,640,947 + ECD_02530 0.30 +1.0
2,640,947 + ECD_02530 0.30 -0.8
2,640,947 + ECD_02530 0.30 -0.3
2,640,947 + ECD_02530 0.30 -0.0
2,640,947 + ECD_02530 0.30 +3.1
2,640,947 + ECD_02530 0.30 +0.3
2,640,947 + ECD_02530 0.30 +0.8
2,640,947 + ECD_02530 0.30 +0.6
2,640,947 + ECD_02530 0.30 +0.1
2,640,948 - ECD_02530 0.30 +1.7
2,640,948 - ECD_02530 0.30 -0.8
2,640,948 - ECD_02530 0.30 -0.8
2,640,948 - ECD_02530 0.30 +0.3
2,640,948 - ECD_02530 0.30 -0.8
2,640,948 - ECD_02530 0.30 -0.3
2,640,948 - ECD_02530 0.30 +0.8
2,640,948 - ECD_02530 0.30 +0.2
2,640,948 - ECD_02530 0.30 -0.1
2,640,948 - ECD_02530 0.30 -1.0
2,640,948 - ECD_02530 0.30 -0.4
2,640,948 - ECD_02530 0.30 +0.7
2,640,948 - ECD_02530 0.30 +1.1
2,640,948 - ECD_02530 0.30 -0.5
2,640,948 - ECD_02530 0.30 +0.3
2,640,948 - ECD_02530 0.30 +1.0
2,640,948 - ECD_02530 0.30 -0.8
2,640,948 - ECD_02530 0.30 +0.5
2,640,948 - ECD_02530 0.30 -1.1
2,640,948 - ECD_02530 0.30 +0.9
2,640,968 + ECD_02530 0.35 -1.0
2,640,968 + ECD_02530 0.35 +1.1
2,641,008 + ECD_02530 0.45 -0.5
2,641,009 - ECD_02530 0.45 +0.7
2,641,009 - ECD_02530 0.45 +0.1
2,641,009 - ECD_02530 0.45 -0.8
2,641,009 - ECD_02530 0.45 -1.4
2,641,057 + ECD_02530 0.57 +0.9
2,641,058 - ECD_02530 0.57 -0.2
2,641,091 + ECD_02530 0.65 +0.7
2,641,091 + ECD_02530 0.65 -0.6
2,641,092 - ECD_02530 0.65 +1.0
2,641,092 - ECD_02530 0.65 -0.6
2,641,142 + ECD_02530 0.77 -0.1
2,641,163 - ECD_02530 0.82 +0.2
2,641,189 + ECD_02530 0.89 -0.1
2,641,253 - -0.2
2,641,282 + +0.9
2,641,283 - +1.4
2,641,283 - -1.2
2,641,283 - +0.7
2,641,283 - -1.3
2,641,338 + -1.2
2,641,339 - +0.5
2,641,417 + +1.5
2,641,417 + -0.1
2,641,418 - +0.4
2,641,418 - +0.3
2,641,420 + +0.0
2,641,420 + -0.3
2,641,420 + +0.0
2,641,420 + +1.0
2,641,420 + +0.7
2,641,420 + +0.0
2,641,420 + -0.9
2,641,420 + +0.6
2,641,421 - +0.1
2,641,421 - -0.2
2,641,421 - -1.8
2,641,421 - +1.0
2,641,421 - +1.2
2,641,421 - +0.7
2,641,421 - -0.7
2,641,421 - -0.1
2,641,421 - -0.7
2,641,437 + ECD_02531 0.11 -0.3
2,641,465 - ECD_02531 0.12 -0.1
2,641,465 - ECD_02531 0.12 -0.9
2,641,540 + ECD_02531 0.16 -0.5
2,641,540 + ECD_02531 0.16 -0.2
2,641,540 + ECD_02531 0.16 +0.9
2,641,540 + ECD_02531 0.16 -0.0
2,641,540 + ECD_02531 0.16 +0.8
2,641,540 + ECD_02531 0.16 -1.1
2,641,540 + ECD_02531 0.16 -1.2
2,641,540 + ECD_02531 0.16 +0.5
2,641,541 - ECD_02531 0.16 +0.1
2,641,541 - ECD_02531 0.16 -1.4
2,641,541 - ECD_02531 0.16 -0.2
2,641,541 - ECD_02531 0.16 +0.7
2,641,541 - ECD_02531 0.16 -0.4
2,641,541 - ECD_02531 0.16 -0.3
2,641,541 - ECD_02531 0.16 +0.3
2,641,541 - ECD_02531 0.16 -0.4
2,641,541 - ECD_02531 0.16 -0.6
2,641,542 + ECD_02531 0.16 -0.5
2,641,542 + ECD_02531 0.16 +0.5
2,641,542 + ECD_02531 0.16 -1.0
2,641,542 + ECD_02531 0.16 -0.5
2,641,542 + ECD_02531 0.16 -0.4
2,641,542 + ECD_02531 0.16 -0.3
2,641,542 + ECD_02531 0.16 +0.1
2,641,542 + ECD_02531 0.16 +0.6
2,641,543 - ECD_02531 0.16 -1.5
2,641,543 - ECD_02531 0.16 +0.2
2,641,543 - ECD_02531 0.16 -0.9
2,641,543 - ECD_02531 0.16 -0.6
2,641,543 - ECD_02531 0.16 -0.6
2,641,543 - ECD_02531 0.16 +0.2
2,641,543 - ECD_02531 0.16 +0.6
2,641,564 - ECD_02531 0.17 +0.0
2,641,571 - ECD_02531 0.17 +0.0
2,641,752 + ECD_02531 0.25 -0.0
2,641,753 - ECD_02531 0.25 +1.0
2,641,764 + ECD_02531 0.26 -0.2
2,641,765 - ECD_02531 0.26 +0.1

Or see this region's nucleotide sequence