Strain Fitness in Escherichia coli BL21 around ECD_02321

Experiment: Bas29

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02319 and ECD_02320 are separated by 32 nucleotidesECD_02320 and ECD_02321 are separated by 204 nucleotidesECD_02321 and ECD_02322 are separated by 133 nucleotides ECD_02319: ECD_02319 - uncharacterized protein, at 2,409,729 to 2,410,103 _02319 ECD_02320: ECD_02320 - WGR domain protein, at 2,410,136 to 2,410,870 _02320 ECD_02321: ECD_02321 - cysteine synthase B (O-acetylserine sulfhydrolase B), at 2,411,075 to 2,411,986 _02321 ECD_02322: ECD_02322 - sulfate/thiosulfate transporter subunit, at 2,412,120 to 2,413,217 _02322 Position (kb) 2411 2412Strain fitness (log2 ratio) -1 0 1at 2410.132 kb on + strandat 2410.204 kb on + strandat 2410.445 kb on + strand, within ECD_02320at 2410.446 kb on - strand, within ECD_02320at 2410.595 kb on + strand, within ECD_02320at 2410.644 kb on + strand, within ECD_02320at 2411.067 kb on - strandat 2411.131 kb on - strandat 2411.131 kb on - strandat 2411.159 kb on + strandat 2411.180 kb on - strand, within ECD_02321at 2411.237 kb on + strand, within ECD_02321at 2411.528 kb on - strand, within ECD_02321at 2411.536 kb on - strand, within ECD_02321at 2411.957 kb on - strandat 2411.957 kb on - strandat 2411.976 kb on - strandat 2411.976 kb on - strandat 2411.976 kb on - strandat 2411.976 kb on - strandat 2411.981 kb on - strandat 2412.000 kb on - strandat 2412.035 kb on - strandat 2412.044 kb on - strandat 2412.118 kb on + strandat 2412.181 kb on + strandat 2412.272 kb on - strand, within ECD_02322at 2412.304 kb on + strand, within ECD_02322at 2412.375 kb on - strand, within ECD_02322at 2412.429 kb on - strand, within ECD_02322at 2412.547 kb on - strand, within ECD_02322at 2412.598 kb on - strand, within ECD_02322at 2412.598 kb on - strand, within ECD_02322at 2412.954 kb on - strand, within ECD_02322

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas29
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2,410,132 + -1.2
2,410,204 + +0.1
2,410,445 + ECD_02320 0.42 -0.9
2,410,446 - ECD_02320 0.42 -0.1
2,410,595 + ECD_02320 0.62 +0.4
2,410,644 + ECD_02320 0.69 -1.2
2,411,067 - +1.1
2,411,131 - +0.1
2,411,131 - -0.0
2,411,159 + +1.0
2,411,180 - ECD_02321 0.12 +0.9
2,411,237 + ECD_02321 0.18 -1.3
2,411,528 - ECD_02321 0.50 -0.8
2,411,536 - ECD_02321 0.51 -0.9
2,411,957 - -1.1
2,411,957 - -0.1
2,411,976 - -0.0
2,411,976 - -0.9
2,411,976 - -0.7
2,411,976 - -1.3
2,411,981 - +0.0
2,412,000 - -1.0
2,412,035 - +0.8
2,412,044 - -1.1
2,412,118 + +0.8
2,412,181 + -1.2
2,412,272 - ECD_02322 0.14 -0.1
2,412,304 + ECD_02322 0.17 -1.7
2,412,375 - ECD_02322 0.23 -0.3
2,412,429 - ECD_02322 0.28 -0.4
2,412,547 - ECD_02322 0.39 +0.2
2,412,598 - ECD_02322 0.44 +1.2
2,412,598 - ECD_02322 0.44 -0.1
2,412,954 - ECD_02322 0.76 +0.3

Or see this region's nucleotide sequence