Experiment: Bas29
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02319 and ECD_02320 are separated by 32 nucleotides ECD_02320 and ECD_02321 are separated by 204 nucleotides ECD_02321 and ECD_02322 are separated by 133 nucleotides
ECD_02319: ECD_02319 - uncharacterized protein, at 2,409,729 to 2,410,103
_02319
ECD_02320: ECD_02320 - WGR domain protein, at 2,410,136 to 2,410,870
_02320
ECD_02321: ECD_02321 - cysteine synthase B (O-acetylserine sulfhydrolase B), at 2,411,075 to 2,411,986
_02321
ECD_02322: ECD_02322 - sulfate/thiosulfate transporter subunit, at 2,412,120 to 2,413,217
_02322
Position (kb)
2411
2412 Strain fitness (log2 ratio)
-1
0
1 at 2410.132 kb on + strand at 2410.204 kb on + strand at 2410.445 kb on + strand, within ECD_02320 at 2410.446 kb on - strand, within ECD_02320 at 2410.595 kb on + strand, within ECD_02320 at 2410.644 kb on + strand, within ECD_02320 at 2411.067 kb on - strand at 2411.131 kb on - strand at 2411.131 kb on - strand at 2411.159 kb on + strand at 2411.180 kb on - strand, within ECD_02321 at 2411.237 kb on + strand, within ECD_02321 at 2411.528 kb on - strand, within ECD_02321 at 2411.536 kb on - strand, within ECD_02321 at 2411.957 kb on - strand at 2411.957 kb on - strand at 2411.976 kb on - strand at 2411.976 kb on - strand at 2411.976 kb on - strand at 2411.976 kb on - strand at 2411.981 kb on - strand at 2412.000 kb on - strand at 2412.035 kb on - strand at 2412.044 kb on - strand at 2412.118 kb on + strand at 2412.181 kb on + strand at 2412.272 kb on - strand, within ECD_02322 at 2412.304 kb on + strand, within ECD_02322 at 2412.375 kb on - strand, within ECD_02322 at 2412.429 kb on - strand, within ECD_02322 at 2412.547 kb on - strand, within ECD_02322 at 2412.598 kb on - strand, within ECD_02322 at 2412.598 kb on - strand, within ECD_02322 at 2412.954 kb on - strand, within ECD_02322
Per-strain Table
Position Strand Gene LocusTag Fraction Bas29 remove 2,410,132 + -1.2 2,410,204 + +0.1 2,410,445 + ECD_02320 0.42 -0.9 2,410,446 - ECD_02320 0.42 -0.1 2,410,595 + ECD_02320 0.62 +0.4 2,410,644 + ECD_02320 0.69 -1.2 2,411,067 - +1.1 2,411,131 - +0.1 2,411,131 - -0.0 2,411,159 + +1.0 2,411,180 - ECD_02321 0.12 +0.9 2,411,237 + ECD_02321 0.18 -1.3 2,411,528 - ECD_02321 0.50 -0.8 2,411,536 - ECD_02321 0.51 -0.9 2,411,957 - -1.1 2,411,957 - -0.1 2,411,976 - -0.0 2,411,976 - -0.9 2,411,976 - -0.7 2,411,976 - -1.3 2,411,981 - +0.0 2,412,000 - -1.0 2,412,035 - +0.8 2,412,044 - -1.1 2,412,118 + +0.8 2,412,181 + -1.2 2,412,272 - ECD_02322 0.14 -0.1 2,412,304 + ECD_02322 0.17 -1.7 2,412,375 - ECD_02322 0.23 -0.3 2,412,429 - ECD_02322 0.28 -0.4 2,412,547 - ECD_02322 0.39 +0.2 2,412,598 - ECD_02322 0.44 +1.2 2,412,598 - ECD_02322 0.44 -0.1 2,412,954 - ECD_02322 0.76 +0.3
Or see this region's nucleotide sequence