Strain Fitness in Escherichia coli BL21 around ECD_01137

Experiment: Bas29

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01136 and ECD_01137 are separated by 220 nucleotidesECD_01137 and ECD_01138 are separated by 204 nucleotides ECD_01136: ECD_01136 - DUF1398 family protein, at 1,200,862 to 1,201,266 _01136 ECD_01137: ECD_01137 - repressor of blue light-responsive genes, at 1,201,487 to 1,202,218 _01137 ECD_01138: ECD_01138 - anti-repressor for YcgE, blue light-responsive; FAD-binding; inactive c-di-GMP phosphodiesterase-like EAL domain protein, at 1,202,423 to 1,203,634 _01138 Position (kb) 1201 1202 1203Strain fitness (log2 ratio) -1 0 1at 1202.045 kb on - strand, within ECD_01137at 1202.049 kb on - strand, within ECD_01137at 1202.079 kb on - strand, within ECD_01137at 1202.579 kb on - strand, within ECD_01138at 1202.907 kb on - strand, within ECD_01138at 1202.907 kb on - strand, within ECD_01138at 1202.992 kb on - strand, within ECD_01138

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas29
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1,202,045 - ECD_01137 0.76 -1.1
1,202,049 - ECD_01137 0.77 -1.6
1,202,079 - ECD_01137 0.81 -0.7
1,202,579 - ECD_01138 0.13 +0.4
1,202,907 - ECD_01138 0.40 +0.8
1,202,907 - ECD_01138 0.40 +0.6
1,202,992 - ECD_01138 0.47 -0.4

Or see this region's nucleotide sequence