Strain Fitness in Escherichia coli BL21 around ECD_02951

Experiment: Bas29

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02950 and ECD_02951 are separated by 44 nucleotidesECD_02951 and ECD_02952 overlap by 4 nucleotidesECD_02952 and ECD_02953 are separated by 283 nucleotides ECD_02950: ECD_02950 - 2,4-dienoyl-CoA reductase, NADH and FMN-linked, at 3,097,747 to 3,099,765 _02950 ECD_02951: ECD_02951 - antitoxinof the HigB-HigA toxin-antitoxin system, at 3,099,810 to 3,100,226 _02951 ECD_02952: ECD_02952 - mRNA interferase toxin of the HigB-HigA toxin-antitoxin system, at 3,100,223 to 3,100,537 _02952 ECD_02953: ECD_02953 - 23S rRNA m(2)G1835 methyltransferase, SAM-dependent, at 3,100,821 to 3,101,957 _02953 Position (kb) 3099 3100 3101Strain fitness (log2 ratio) -2 -1 0 1at 3098.965 kb on - strand, within ECD_02950at 3098.985 kb on + strand, within ECD_02950at 3099.022 kb on + strand, within ECD_02950at 3099.037 kb on + strand, within ECD_02950at 3099.041 kb on - strand, within ECD_02950at 3099.196 kb on + strand, within ECD_02950at 3099.207 kb on - strand, within ECD_02950at 3099.284 kb on - strand, within ECD_02950at 3099.284 kb on - strand, within ECD_02950at 3099.284 kb on - strand, within ECD_02950at 3099.287 kb on + strand, within ECD_02950at 3099.288 kb on - strand, within ECD_02950at 3099.334 kb on - strand, within ECD_02950at 3099.360 kb on - strand, within ECD_02950at 3099.360 kb on - strand, within ECD_02950at 3099.530 kb on + strand, within ECD_02950at 3099.531 kb on - strand, within ECD_02950at 3099.531 kb on - strand, within ECD_02950at 3099.590 kb on + strandat 3099.590 kb on + strandat 3099.593 kb on + strandat 3099.593 kb on + strandat 3099.593 kb on + strandat 3099.594 kb on - strandat 3099.683 kb on + strandat 3099.684 kb on - strandat 3099.764 kb on - strandat 3099.877 kb on - strand, within ECD_02951at 3100.238 kb on - strandat 3100.267 kb on - strand, within ECD_02952at 3100.292 kb on + strand, within ECD_02952at 3100.292 kb on + strand, within ECD_02952at 3100.293 kb on - strand, within ECD_02952at 3100.293 kb on - strand, within ECD_02952at 3100.293 kb on - strand, within ECD_02952at 3100.293 kb on - strand, within ECD_02952at 3100.293 kb on - strand, within ECD_02952at 3100.293 kb on - strand, within ECD_02952at 3100.293 kb on - strand, within ECD_02952at 3100.293 kb on - strand, within ECD_02952at 3100.297 kb on - strand, within ECD_02952at 3100.297 kb on - strand, within ECD_02952at 3100.328 kb on + strand, within ECD_02952at 3100.328 kb on + strand, within ECD_02952at 3100.338 kb on - strand, within ECD_02952at 3100.365 kb on + strand, within ECD_02952at 3100.380 kb on + strand, within ECD_02952at 3100.390 kb on + strand, within ECD_02952at 3100.626 kb on + strandat 3100.657 kb on + strandat 3100.760 kb on - strandat 3100.868 kb on + strandat 3100.880 kb on + strandat 3100.880 kb on + strandat 3100.881 kb on - strandat 3100.921 kb on + strandat 3100.921 kb on + strandat 3100.922 kb on - strandat 3100.947 kb on - strand, within ECD_02953at 3100.948 kb on + strand, within ECD_02953at 3100.948 kb on + strand, within ECD_02953at 3100.948 kb on + strand, within ECD_02953at 3100.948 kb on + strand, within ECD_02953at 3100.949 kb on - strand, within ECD_02953at 3101.103 kb on - strand, within ECD_02953

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas29
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3,098,965 - ECD_02950 0.60 +0.5
3,098,985 + ECD_02950 0.61 -1.3
3,099,022 + ECD_02950 0.63 +0.7
3,099,037 + ECD_02950 0.64 +0.2
3,099,041 - ECD_02950 0.64 +0.8
3,099,196 + ECD_02950 0.72 -0.3
3,099,207 - ECD_02950 0.72 -1.0
3,099,284 - ECD_02950 0.76 +0.6
3,099,284 - ECD_02950 0.76 -0.3
3,099,284 - ECD_02950 0.76 +0.5
3,099,287 + ECD_02950 0.76 -1.5
3,099,288 - ECD_02950 0.76 +0.5
3,099,334 - ECD_02950 0.79 -0.7
3,099,360 - ECD_02950 0.80 -0.1
3,099,360 - ECD_02950 0.80 +0.3
3,099,530 + ECD_02950 0.88 -1.1
3,099,531 - ECD_02950 0.88 -0.6
3,099,531 - ECD_02950 0.88 -0.2
3,099,590 + -1.3
3,099,590 + -0.6
3,099,593 + -1.0
3,099,593 + -0.1
3,099,593 + +0.1
3,099,594 - -0.0
3,099,683 + -0.7
3,099,684 - +0.3
3,099,764 - -0.8
3,099,877 - ECD_02951 0.16 +0.9
3,100,238 - -1.7
3,100,267 - ECD_02952 0.14 -0.4
3,100,292 + ECD_02952 0.22 -0.1
3,100,292 + ECD_02952 0.22 +0.1
3,100,293 - ECD_02952 0.22 +0.2
3,100,293 - ECD_02952 0.22 +0.4
3,100,293 - ECD_02952 0.22 -0.0
3,100,293 - ECD_02952 0.22 -1.1
3,100,293 - ECD_02952 0.22 -0.5
3,100,293 - ECD_02952 0.22 -0.5
3,100,293 - ECD_02952 0.22 +0.7
3,100,293 - ECD_02952 0.22 +0.5
3,100,297 - ECD_02952 0.23 +0.3
3,100,297 - ECD_02952 0.23 +1.5
3,100,328 + ECD_02952 0.33 +0.9
3,100,328 + ECD_02952 0.33 -0.9
3,100,338 - ECD_02952 0.37 -0.4
3,100,365 + ECD_02952 0.45 +0.2
3,100,380 + ECD_02952 0.50 -0.5
3,100,390 + ECD_02952 0.53 +0.3
3,100,626 + -2.5
3,100,657 + +0.1
3,100,760 - -0.5
3,100,868 + -0.2
3,100,880 + +0.6
3,100,880 + +0.3
3,100,881 - +0.2
3,100,921 + +0.1
3,100,921 + -0.0
3,100,922 - +0.3
3,100,947 - ECD_02953 0.11 +0.9
3,100,948 + ECD_02953 0.11 +0.4
3,100,948 + ECD_02953 0.11 -0.1
3,100,948 + ECD_02953 0.11 -1.2
3,100,948 + ECD_02953 0.11 +0.4
3,100,949 - ECD_02953 0.11 +0.7
3,101,103 - ECD_02953 0.25 -0.2

Or see this region's nucleotide sequence