Strain Fitness in Escherichia coli BL21 around ECD_02150

Experiment: Bas29

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02148 and ECD_02149 overlap by 1 nucleotidesECD_02149 and ECD_02150 overlap by 4 nucleotidesECD_02150 and ECD_02151 are separated by 30 nucleotides ECD_02148: ECD_02148 - acetyl-CoA:acetoacetyl-CoA transferase, alpha subunit, at 2,213,808 to 2,214,470 _02148 ECD_02149: ECD_02149 - acetyl-CoA:acetoacetyl-CoA transferase, beta subunit, at 2,214,470 to 2,215,120 _02149 ECD_02150: ECD_02150 - short chain fatty acid transporter, at 2,215,117 to 2,216,439 _02150 ECD_02151: ECD_02151 - acetyl-CoA acetyltransferase, at 2,216,470 to 2,217,654 _02151 Position (kb) 2215 2216 2217Strain fitness (log2 ratio) -1 0 1at 2214.307 kb on - strand, within ECD_02148at 2214.356 kb on + strand, within ECD_02148at 2214.589 kb on + strand, within ECD_02149at 2214.590 kb on - strand, within ECD_02149at 2214.590 kb on - strand, within ECD_02149at 2214.997 kb on + strand, within ECD_02149at 2215.099 kb on + strandat 2215.116 kb on + strandat 2215.117 kb on - strandat 2215.314 kb on + strand, within ECD_02150at 2215.971 kb on - strand, within ECD_02150at 2215.975 kb on - strand, within ECD_02150at 2215.975 kb on - strand, within ECD_02150at 2215.991 kb on - strand, within ECD_02150at 2215.992 kb on + strand, within ECD_02150at 2216.053 kb on + strand, within ECD_02150at 2216.054 kb on - strand, within ECD_02150at 2216.175 kb on + strand, within ECD_02150at 2216.378 kb on - strandat 2216.503 kb on - strandat 2216.571 kb on + strandat 2216.572 kb on - strandat 2216.640 kb on - strand, within ECD_02151at 2216.729 kb on + strand, within ECD_02151at 2216.836 kb on + strand, within ECD_02151at 2217.011 kb on + strand, within ECD_02151at 2217.011 kb on + strand, within ECD_02151at 2217.012 kb on - strand, within ECD_02151at 2217.058 kb on - strand, within ECD_02151

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas29
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2,214,307 - ECD_02148 0.75 +0.1
2,214,356 + ECD_02148 0.83 +0.8
2,214,589 + ECD_02149 0.18 -0.1
2,214,590 - ECD_02149 0.18 +1.6
2,214,590 - ECD_02149 0.18 +0.9
2,214,997 + ECD_02149 0.81 -0.5
2,215,099 + -0.4
2,215,116 + -0.2
2,215,117 - +0.6
2,215,314 + ECD_02150 0.15 -0.5
2,215,971 - ECD_02150 0.65 -0.2
2,215,975 - ECD_02150 0.65 +0.6
2,215,975 - ECD_02150 0.65 +1.1
2,215,991 - ECD_02150 0.66 -0.5
2,215,992 + ECD_02150 0.66 -0.2
2,216,053 + ECD_02150 0.71 +0.7
2,216,054 - ECD_02150 0.71 +1.6
2,216,175 + ECD_02150 0.80 +0.7
2,216,378 - +0.2
2,216,503 - +0.3
2,216,571 + -0.8
2,216,572 - -0.0
2,216,640 - ECD_02151 0.14 -1.5
2,216,729 + ECD_02151 0.22 -0.3
2,216,836 + ECD_02151 0.31 +0.2
2,217,011 + ECD_02151 0.46 +0.8
2,217,011 + ECD_02151 0.46 +0.0
2,217,012 - ECD_02151 0.46 -0.1
2,217,058 - ECD_02151 0.50 +0.1

Or see this region's nucleotide sequence