Strain Fitness in Escherichia coli BL21 around ECD_02584

Experiment: Bas06

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02583 and ECD_02584 are separated by 105 nucleotidesECD_02584 and ECD_02585 are separated by 50 nucleotides ECD_02583: ECD_02583 - methyl-directed mismatch repair protein, at 2,697,060 to 2,699,621 _02583 ECD_02584: ECD_02584 - serine/threonine-specific protein phosphatase 2, at 2,699,727 to 2,700,383 _02584 ECD_02585: ECD_02585 - DeoR family putative transcriptional regulator, at 2,700,434 to 2,701,201 _02585 Position (kb) 2699 2700 2701Strain fitness (log2 ratio) -2 -1 0 1at 2698.746 kb on + strand, within ECD_02583at 2698.746 kb on + strand, within ECD_02583at 2698.747 kb on - strand, within ECD_02583at 2698.747 kb on - strand, within ECD_02583at 2698.749 kb on - strand, within ECD_02583at 2698.749 kb on - strand, within ECD_02583at 2698.758 kb on + strand, within ECD_02583at 2698.758 kb on + strand, within ECD_02583at 2698.758 kb on + strand, within ECD_02583at 2698.759 kb on - strand, within ECD_02583at 2698.759 kb on - strand, within ECD_02583at 2698.831 kb on + strand, within ECD_02583at 2698.831 kb on + strand, within ECD_02583at 2698.832 kb on - strand, within ECD_02583at 2698.883 kb on + strand, within ECD_02583at 2698.883 kb on + strand, within ECD_02583at 2698.884 kb on - strand, within ECD_02583at 2698.922 kb on + strand, within ECD_02583at 2698.923 kb on - strand, within ECD_02583at 2698.923 kb on - strand, within ECD_02583at 2698.923 kb on - strand, within ECD_02583at 2698.923 kb on - strand, within ECD_02583at 2698.923 kb on - strand, within ECD_02583at 2698.923 kb on - strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.926 kb on + strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.927 kb on - strand, within ECD_02583at 2698.929 kb on - strand, within ECD_02583at 2698.929 kb on - strand, within ECD_02583at 2698.962 kb on + strand, within ECD_02583at 2698.963 kb on - strand, within ECD_02583at 2698.975 kb on - strand, within ECD_02583at 2698.975 kb on - strand, within ECD_02583at 2698.975 kb on - strand, within ECD_02583at 2698.975 kb on - strand, within ECD_02583at 2698.975 kb on - strand, within ECD_02583at 2698.975 kb on - strand, within ECD_02583at 2698.975 kb on - strand, within ECD_02583at 2698.975 kb on - strand, within ECD_02583at 2698.975 kb on - strand, within ECD_02583at 2699.029 kb on + strand, within ECD_02583at 2699.069 kb on + strand, within ECD_02583at 2699.097 kb on - strand, within ECD_02583at 2699.097 kb on - strand, within ECD_02583at 2699.101 kb on + strand, within ECD_02583at 2699.101 kb on + strand, within ECD_02583at 2699.102 kb on - strand, within ECD_02583at 2699.102 kb on - strand, within ECD_02583at 2699.118 kb on + strand, within ECD_02583at 2699.163 kb on + strand, within ECD_02583at 2699.163 kb on + strand, within ECD_02583at 2699.163 kb on + strand, within ECD_02583at 2699.210 kb on + strand, within ECD_02583at 2699.211 kb on - strand, within ECD_02583at 2699.211 kb on - strand, within ECD_02583at 2699.216 kb on + strand, within ECD_02583at 2699.217 kb on - strand, within ECD_02583at 2699.230 kb on + strand, within ECD_02583at 2699.244 kb on + strand, within ECD_02583at 2699.244 kb on + strand, within ECD_02583at 2699.333 kb on + strand, within ECD_02583at 2699.334 kb on - strand, within ECD_02583at 2699.334 kb on - strand, within ECD_02583at 2699.371 kb on - strandat 2699.417 kb on + strandat 2699.417 kb on + strandat 2699.418 kb on - strandat 2699.619 kb on + strandat 2699.656 kb on - strandat 2699.775 kb on - strandat 2699.777 kb on - strandat 2699.860 kb on + strand, within ECD_02584at 2699.861 kb on - strand, within ECD_02584at 2700.067 kb on + strand, within ECD_02584at 2700.514 kb on + strand, within ECD_02585at 2700.518 kb on - strand, within ECD_02585at 2700.518 kb on - strand, within ECD_02585at 2700.518 kb on - strand, within ECD_02585at 2700.570 kb on + strand, within ECD_02585at 2700.641 kb on - strand, within ECD_02585at 2700.692 kb on - strand, within ECD_02585at 2700.800 kb on - strand, within ECD_02585at 2700.800 kb on - strand, within ECD_02585at 2700.817 kb on - strand, within ECD_02585at 2700.817 kb on - strand, within ECD_02585at 2700.912 kb on + strand, within ECD_02585at 2700.912 kb on + strand, within ECD_02585at 2700.912 kb on + strand, within ECD_02585at 2700.913 kb on - strand, within ECD_02585at 2700.913 kb on - strand, within ECD_02585at 2700.913 kb on - strand, within ECD_02585at 2700.916 kb on + strand, within ECD_02585at 2700.917 kb on - strand, within ECD_02585at 2700.917 kb on - strand, within ECD_02585at 2700.917 kb on - strand, within ECD_02585at 2700.917 kb on - strand, within ECD_02585at 2700.917 kb on - strand, within ECD_02585at 2700.917 kb on - strand, within ECD_02585at 2701.102 kb on + strand, within ECD_02585at 2701.102 kb on + strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.103 kb on - strand, within ECD_02585at 2701.138 kb on + strandat 2701.139 kb on - strandat 2701.161 kb on - strandat 2701.161 kb on - strandat 2701.161 kb on - strandat 2701.234 kb on + strandat 2701.234 kb on + strandat 2701.234 kb on + strandat 2701.235 kb on - strandat 2701.235 kb on - strandat 2701.235 kb on - strandat 2701.235 kb on - strandat 2701.239 kb on + strandat 2701.240 kb on - strandat 2701.269 kb on + strandat 2701.277 kb on - strandat 2701.277 kb on - strandat 2701.277 kb on - strandat 2701.286 kb on - strandat 2701.347 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas06
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2,698,746 + ECD_02583 0.66 +0.3
2,698,746 + ECD_02583 0.66 +0.3
2,698,747 - ECD_02583 0.66 +0.2
2,698,747 - ECD_02583 0.66 -0.4
2,698,749 - ECD_02583 0.66 +0.3
2,698,749 - ECD_02583 0.66 -1.4
2,698,758 + ECD_02583 0.66 +1.4
2,698,758 + ECD_02583 0.66 +0.3
2,698,758 + ECD_02583 0.66 -0.6
2,698,759 - ECD_02583 0.66 +0.7
2,698,759 - ECD_02583 0.66 +0.6
2,698,831 + ECD_02583 0.69 +0.1
2,698,831 + ECD_02583 0.69 -0.2
2,698,832 - ECD_02583 0.69 -0.6
2,698,883 + ECD_02583 0.71 +1.0
2,698,883 + ECD_02583 0.71 -0.2
2,698,884 - ECD_02583 0.71 -0.4
2,698,922 + ECD_02583 0.73 -0.4
2,698,923 - ECD_02583 0.73 -0.9
2,698,923 - ECD_02583 0.73 -1.8
2,698,923 - ECD_02583 0.73 -1.0
2,698,923 - ECD_02583 0.73 -0.3
2,698,923 - ECD_02583 0.73 +0.1
2,698,923 - ECD_02583 0.73 -0.2
2,698,926 + ECD_02583 0.73 -1.5
2,698,926 + ECD_02583 0.73 +0.9
2,698,926 + ECD_02583 0.73 -0.2
2,698,926 + ECD_02583 0.73 +0.6
2,698,926 + ECD_02583 0.73 -0.2
2,698,926 + ECD_02583 0.73 +0.2
2,698,926 + ECD_02583 0.73 +0.1
2,698,926 + ECD_02583 0.73 +0.2
2,698,926 + ECD_02583 0.73 +0.4
2,698,926 + ECD_02583 0.73 +0.3
2,698,926 + ECD_02583 0.73 +0.3
2,698,926 + ECD_02583 0.73 -0.3
2,698,926 + ECD_02583 0.73 -0.2
2,698,926 + ECD_02583 0.73 +0.4
2,698,926 + ECD_02583 0.73 -0.2
2,698,926 + ECD_02583 0.73 -0.0
2,698,926 + ECD_02583 0.73 +0.0
2,698,927 - ECD_02583 0.73 +0.2
2,698,927 - ECD_02583 0.73 -0.8
2,698,927 - ECD_02583 0.73 -0.0
2,698,927 - ECD_02583 0.73 +0.9
2,698,927 - ECD_02583 0.73 +0.7
2,698,927 - ECD_02583 0.73 -0.0
2,698,927 - ECD_02583 0.73 +0.6
2,698,927 - ECD_02583 0.73 +0.4
2,698,927 - ECD_02583 0.73 +0.1
2,698,927 - ECD_02583 0.73 +0.4
2,698,927 - ECD_02583 0.73 -1.3
2,698,927 - ECD_02583 0.73 +0.8
2,698,927 - ECD_02583 0.73 +0.4
2,698,927 - ECD_02583 0.73 +0.4
2,698,927 - ECD_02583 0.73 -1.1
2,698,927 - ECD_02583 0.73 -0.8
2,698,927 - ECD_02583 0.73 +0.3
2,698,927 - ECD_02583 0.73 -0.2
2,698,929 - ECD_02583 0.73 +0.2
2,698,929 - ECD_02583 0.73 +0.1
2,698,962 + ECD_02583 0.74 +0.4
2,698,963 - ECD_02583 0.74 +0.4
2,698,975 - ECD_02583 0.75 +0.3
2,698,975 - ECD_02583 0.75 -0.5
2,698,975 - ECD_02583 0.75 -0.2
2,698,975 - ECD_02583 0.75 +0.1
2,698,975 - ECD_02583 0.75 +0.4
2,698,975 - ECD_02583 0.75 -0.6
2,698,975 - ECD_02583 0.75 -0.0
2,698,975 - ECD_02583 0.75 -0.6
2,698,975 - ECD_02583 0.75 -0.4
2,699,029 + ECD_02583 0.77 -1.7
2,699,069 + ECD_02583 0.78 +0.4
2,699,097 - ECD_02583 0.80 -0.3
2,699,097 - ECD_02583 0.80 -0.2
2,699,101 + ECD_02583 0.80 +0.2
2,699,101 + ECD_02583 0.80 -0.3
2,699,102 - ECD_02583 0.80 -0.1
2,699,102 - ECD_02583 0.80 -0.5
2,699,118 + ECD_02583 0.80 +0.3
2,699,163 + ECD_02583 0.82 -0.1
2,699,163 + ECD_02583 0.82 -0.7
2,699,163 + ECD_02583 0.82 +1.1
2,699,210 + ECD_02583 0.84 -0.1
2,699,211 - ECD_02583 0.84 -0.2
2,699,211 - ECD_02583 0.84 -0.8
2,699,216 + ECD_02583 0.84 +0.0
2,699,217 - ECD_02583 0.84 +0.8
2,699,230 + ECD_02583 0.85 +0.2
2,699,244 + ECD_02583 0.85 -0.1
2,699,244 + ECD_02583 0.85 -0.0
2,699,333 + ECD_02583 0.89 -0.8
2,699,334 - ECD_02583 0.89 +0.5
2,699,334 - ECD_02583 0.89 +0.7
2,699,371 - -0.7
2,699,417 + +0.8
2,699,417 + -0.0
2,699,418 - +0.9
2,699,619 + -0.7
2,699,656 - -0.1
2,699,775 - -1.7
2,699,777 - -0.2
2,699,860 + ECD_02584 0.20 +0.7
2,699,861 - ECD_02584 0.20 +0.8
2,700,067 + ECD_02584 0.52 -0.5
2,700,514 + ECD_02585 0.10 -0.8
2,700,518 - ECD_02585 0.11 +0.2
2,700,518 - ECD_02585 0.11 -0.1
2,700,518 - ECD_02585 0.11 -0.2
2,700,570 + ECD_02585 0.18 +0.5
2,700,641 - ECD_02585 0.27 -0.7
2,700,692 - ECD_02585 0.34 -0.1
2,700,800 - ECD_02585 0.48 +0.5
2,700,800 - ECD_02585 0.48 -0.6
2,700,817 - ECD_02585 0.50 +0.3
2,700,817 - ECD_02585 0.50 -1.3
2,700,912 + ECD_02585 0.62 +0.2
2,700,912 + ECD_02585 0.62 +0.5
2,700,912 + ECD_02585 0.62 -0.2
2,700,913 - ECD_02585 0.62 -0.5
2,700,913 - ECD_02585 0.62 +0.7
2,700,913 - ECD_02585 0.62 +0.7
2,700,916 + ECD_02585 0.63 -0.3
2,700,917 - ECD_02585 0.63 +0.5
2,700,917 - ECD_02585 0.63 -0.8
2,700,917 - ECD_02585 0.63 -0.4
2,700,917 - ECD_02585 0.63 +0.3
2,700,917 - ECD_02585 0.63 -0.5
2,700,917 - ECD_02585 0.63 -0.2
2,701,102 + ECD_02585 0.87 +0.2
2,701,102 + ECD_02585 0.87 +0.4
2,701,103 - ECD_02585 0.87 -0.4
2,701,103 - ECD_02585 0.87 +0.1
2,701,103 - ECD_02585 0.87 -0.0
2,701,103 - ECD_02585 0.87 -1.0
2,701,103 - ECD_02585 0.87 +1.1
2,701,103 - ECD_02585 0.87 -0.4
2,701,103 - ECD_02585 0.87 +1.5
2,701,103 - ECD_02585 0.87 +0.0
2,701,103 - ECD_02585 0.87 -0.2
2,701,103 - ECD_02585 0.87 +0.1
2,701,138 + +0.6
2,701,139 - +0.6
2,701,161 - +0.3
2,701,161 - +0.1
2,701,161 - -0.7
2,701,234 + -0.1
2,701,234 + +0.8
2,701,234 + +0.5
2,701,235 - -0.3
2,701,235 - +0.5
2,701,235 - +0.6
2,701,235 - -0.1
2,701,239 + -0.1
2,701,240 - +0.1
2,701,269 + +0.1
2,701,277 - +0.0
2,701,277 - +0.0
2,701,277 - -0.2
2,701,286 - -0.1
2,701,347 + -0.6

Or see this region's nucleotide sequence