Experiment: Bas06
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02583 and ECD_02584 are separated by 105 nucleotides ECD_02584 and ECD_02585 are separated by 50 nucleotides
ECD_02583: ECD_02583 - methyl-directed mismatch repair protein, at 2,697,060 to 2,699,621
_02583
ECD_02584: ECD_02584 - serine/threonine-specific protein phosphatase 2, at 2,699,727 to 2,700,383
_02584
ECD_02585: ECD_02585 - DeoR family putative transcriptional regulator, at 2,700,434 to 2,701,201
_02585
Position (kb)
2699
2700
2701 Strain fitness (log2 ratio)
-2
-1
0
1 at 2698.746 kb on + strand, within ECD_02583 at 2698.746 kb on + strand, within ECD_02583 at 2698.747 kb on - strand, within ECD_02583 at 2698.747 kb on - strand, within ECD_02583 at 2698.749 kb on - strand, within ECD_02583 at 2698.749 kb on - strand, within ECD_02583 at 2698.758 kb on + strand, within ECD_02583 at 2698.758 kb on + strand, within ECD_02583 at 2698.758 kb on + strand, within ECD_02583 at 2698.759 kb on - strand, within ECD_02583 at 2698.759 kb on - strand, within ECD_02583 at 2698.831 kb on + strand, within ECD_02583 at 2698.831 kb on + strand, within ECD_02583 at 2698.832 kb on - strand, within ECD_02583 at 2698.883 kb on + strand, within ECD_02583 at 2698.883 kb on + strand, within ECD_02583 at 2698.884 kb on - strand, within ECD_02583 at 2698.922 kb on + strand, within ECD_02583 at 2698.923 kb on - strand, within ECD_02583 at 2698.923 kb on - strand, within ECD_02583 at 2698.923 kb on - strand, within ECD_02583 at 2698.923 kb on - strand, within ECD_02583 at 2698.923 kb on - strand, within ECD_02583 at 2698.923 kb on - strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.926 kb on + strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.927 kb on - strand, within ECD_02583 at 2698.929 kb on - strand, within ECD_02583 at 2698.929 kb on - strand, within ECD_02583 at 2698.962 kb on + strand, within ECD_02583 at 2698.963 kb on - strand, within ECD_02583 at 2698.975 kb on - strand, within ECD_02583 at 2698.975 kb on - strand, within ECD_02583 at 2698.975 kb on - strand, within ECD_02583 at 2698.975 kb on - strand, within ECD_02583 at 2698.975 kb on - strand, within ECD_02583 at 2698.975 kb on - strand, within ECD_02583 at 2698.975 kb on - strand, within ECD_02583 at 2698.975 kb on - strand, within ECD_02583 at 2698.975 kb on - strand, within ECD_02583 at 2699.029 kb on + strand, within ECD_02583 at 2699.069 kb on + strand, within ECD_02583 at 2699.097 kb on - strand, within ECD_02583 at 2699.097 kb on - strand, within ECD_02583 at 2699.101 kb on + strand, within ECD_02583 at 2699.101 kb on + strand, within ECD_02583 at 2699.102 kb on - strand, within ECD_02583 at 2699.102 kb on - strand, within ECD_02583 at 2699.118 kb on + strand, within ECD_02583 at 2699.163 kb on + strand, within ECD_02583 at 2699.163 kb on + strand, within ECD_02583 at 2699.163 kb on + strand, within ECD_02583 at 2699.210 kb on + strand, within ECD_02583 at 2699.211 kb on - strand, within ECD_02583 at 2699.211 kb on - strand, within ECD_02583 at 2699.216 kb on + strand, within ECD_02583 at 2699.217 kb on - strand, within ECD_02583 at 2699.230 kb on + strand, within ECD_02583 at 2699.244 kb on + strand, within ECD_02583 at 2699.244 kb on + strand, within ECD_02583 at 2699.333 kb on + strand, within ECD_02583 at 2699.334 kb on - strand, within ECD_02583 at 2699.334 kb on - strand, within ECD_02583 at 2699.371 kb on - strand at 2699.417 kb on + strand at 2699.417 kb on + strand at 2699.418 kb on - strand at 2699.619 kb on + strand at 2699.656 kb on - strand at 2699.775 kb on - strand at 2699.777 kb on - strand at 2699.860 kb on + strand, within ECD_02584 at 2699.861 kb on - strand, within ECD_02584 at 2700.067 kb on + strand, within ECD_02584 at 2700.514 kb on + strand, within ECD_02585 at 2700.518 kb on - strand, within ECD_02585 at 2700.518 kb on - strand, within ECD_02585 at 2700.518 kb on - strand, within ECD_02585 at 2700.570 kb on + strand, within ECD_02585 at 2700.641 kb on - strand, within ECD_02585 at 2700.692 kb on - strand, within ECD_02585 at 2700.800 kb on - strand, within ECD_02585 at 2700.800 kb on - strand, within ECD_02585 at 2700.817 kb on - strand, within ECD_02585 at 2700.817 kb on - strand, within ECD_02585 at 2700.912 kb on + strand, within ECD_02585 at 2700.912 kb on + strand, within ECD_02585 at 2700.912 kb on + strand, within ECD_02585 at 2700.913 kb on - strand, within ECD_02585 at 2700.913 kb on - strand, within ECD_02585 at 2700.913 kb on - strand, within ECD_02585 at 2700.916 kb on + strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2700.917 kb on - strand, within ECD_02585 at 2701.102 kb on + strand, within ECD_02585 at 2701.102 kb on + strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.103 kb on - strand, within ECD_02585 at 2701.138 kb on + strand at 2701.139 kb on - strand at 2701.161 kb on - strand at 2701.161 kb on - strand at 2701.161 kb on - strand at 2701.234 kb on + strand at 2701.234 kb on + strand at 2701.234 kb on + strand at 2701.235 kb on - strand at 2701.235 kb on - strand at 2701.235 kb on - strand at 2701.235 kb on - strand at 2701.239 kb on + strand at 2701.240 kb on - strand at 2701.269 kb on + strand at 2701.277 kb on - strand at 2701.277 kb on - strand at 2701.277 kb on - strand at 2701.286 kb on - strand at 2701.347 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas06 remove 2,698,746 + ECD_02583 0.66 +0.3 2,698,746 + ECD_02583 0.66 +0.3 2,698,747 - ECD_02583 0.66 +0.2 2,698,747 - ECD_02583 0.66 -0.4 2,698,749 - ECD_02583 0.66 +0.3 2,698,749 - ECD_02583 0.66 -1.4 2,698,758 + ECD_02583 0.66 +1.4 2,698,758 + ECD_02583 0.66 +0.3 2,698,758 + ECD_02583 0.66 -0.6 2,698,759 - ECD_02583 0.66 +0.7 2,698,759 - ECD_02583 0.66 +0.6 2,698,831 + ECD_02583 0.69 +0.1 2,698,831 + ECD_02583 0.69 -0.2 2,698,832 - ECD_02583 0.69 -0.6 2,698,883 + ECD_02583 0.71 +1.0 2,698,883 + ECD_02583 0.71 -0.2 2,698,884 - ECD_02583 0.71 -0.4 2,698,922 + ECD_02583 0.73 -0.4 2,698,923 - ECD_02583 0.73 -0.9 2,698,923 - ECD_02583 0.73 -1.8 2,698,923 - ECD_02583 0.73 -1.0 2,698,923 - ECD_02583 0.73 -0.3 2,698,923 - ECD_02583 0.73 +0.1 2,698,923 - ECD_02583 0.73 -0.2 2,698,926 + ECD_02583 0.73 -1.5 2,698,926 + ECD_02583 0.73 +0.9 2,698,926 + ECD_02583 0.73 -0.2 2,698,926 + ECD_02583 0.73 +0.6 2,698,926 + ECD_02583 0.73 -0.2 2,698,926 + ECD_02583 0.73 +0.2 2,698,926 + ECD_02583 0.73 +0.1 2,698,926 + ECD_02583 0.73 +0.2 2,698,926 + ECD_02583 0.73 +0.4 2,698,926 + ECD_02583 0.73 +0.3 2,698,926 + ECD_02583 0.73 +0.3 2,698,926 + ECD_02583 0.73 -0.3 2,698,926 + ECD_02583 0.73 -0.2 2,698,926 + ECD_02583 0.73 +0.4 2,698,926 + ECD_02583 0.73 -0.2 2,698,926 + ECD_02583 0.73 -0.0 2,698,926 + ECD_02583 0.73 +0.0 2,698,927 - ECD_02583 0.73 +0.2 2,698,927 - ECD_02583 0.73 -0.8 2,698,927 - ECD_02583 0.73 -0.0 2,698,927 - ECD_02583 0.73 +0.9 2,698,927 - ECD_02583 0.73 +0.7 2,698,927 - ECD_02583 0.73 -0.0 2,698,927 - ECD_02583 0.73 +0.6 2,698,927 - ECD_02583 0.73 +0.4 2,698,927 - ECD_02583 0.73 +0.1 2,698,927 - ECD_02583 0.73 +0.4 2,698,927 - ECD_02583 0.73 -1.3 2,698,927 - ECD_02583 0.73 +0.8 2,698,927 - ECD_02583 0.73 +0.4 2,698,927 - ECD_02583 0.73 +0.4 2,698,927 - ECD_02583 0.73 -1.1 2,698,927 - ECD_02583 0.73 -0.8 2,698,927 - ECD_02583 0.73 +0.3 2,698,927 - ECD_02583 0.73 -0.2 2,698,929 - ECD_02583 0.73 +0.2 2,698,929 - ECD_02583 0.73 +0.1 2,698,962 + ECD_02583 0.74 +0.4 2,698,963 - ECD_02583 0.74 +0.4 2,698,975 - ECD_02583 0.75 +0.3 2,698,975 - ECD_02583 0.75 -0.5 2,698,975 - ECD_02583 0.75 -0.2 2,698,975 - ECD_02583 0.75 +0.1 2,698,975 - ECD_02583 0.75 +0.4 2,698,975 - ECD_02583 0.75 -0.6 2,698,975 - ECD_02583 0.75 -0.0 2,698,975 - ECD_02583 0.75 -0.6 2,698,975 - ECD_02583 0.75 -0.4 2,699,029 + ECD_02583 0.77 -1.7 2,699,069 + ECD_02583 0.78 +0.4 2,699,097 - ECD_02583 0.80 -0.3 2,699,097 - ECD_02583 0.80 -0.2 2,699,101 + ECD_02583 0.80 +0.2 2,699,101 + ECD_02583 0.80 -0.3 2,699,102 - ECD_02583 0.80 -0.1 2,699,102 - ECD_02583 0.80 -0.5 2,699,118 + ECD_02583 0.80 +0.3 2,699,163 + ECD_02583 0.82 -0.1 2,699,163 + ECD_02583 0.82 -0.7 2,699,163 + ECD_02583 0.82 +1.1 2,699,210 + ECD_02583 0.84 -0.1 2,699,211 - ECD_02583 0.84 -0.2 2,699,211 - ECD_02583 0.84 -0.8 2,699,216 + ECD_02583 0.84 +0.0 2,699,217 - ECD_02583 0.84 +0.8 2,699,230 + ECD_02583 0.85 +0.2 2,699,244 + ECD_02583 0.85 -0.1 2,699,244 + ECD_02583 0.85 -0.0 2,699,333 + ECD_02583 0.89 -0.8 2,699,334 - ECD_02583 0.89 +0.5 2,699,334 - ECD_02583 0.89 +0.7 2,699,371 - -0.7 2,699,417 + +0.8 2,699,417 + -0.0 2,699,418 - +0.9 2,699,619 + -0.7 2,699,656 - -0.1 2,699,775 - -1.7 2,699,777 - -0.2 2,699,860 + ECD_02584 0.20 +0.7 2,699,861 - ECD_02584 0.20 +0.8 2,700,067 + ECD_02584 0.52 -0.5 2,700,514 + ECD_02585 0.10 -0.8 2,700,518 - ECD_02585 0.11 +0.2 2,700,518 - ECD_02585 0.11 -0.1 2,700,518 - ECD_02585 0.11 -0.2 2,700,570 + ECD_02585 0.18 +0.5 2,700,641 - ECD_02585 0.27 -0.7 2,700,692 - ECD_02585 0.34 -0.1 2,700,800 - ECD_02585 0.48 +0.5 2,700,800 - ECD_02585 0.48 -0.6 2,700,817 - ECD_02585 0.50 +0.3 2,700,817 - ECD_02585 0.50 -1.3 2,700,912 + ECD_02585 0.62 +0.2 2,700,912 + ECD_02585 0.62 +0.5 2,700,912 + ECD_02585 0.62 -0.2 2,700,913 - ECD_02585 0.62 -0.5 2,700,913 - ECD_02585 0.62 +0.7 2,700,913 - ECD_02585 0.62 +0.7 2,700,916 + ECD_02585 0.63 -0.3 2,700,917 - ECD_02585 0.63 +0.5 2,700,917 - ECD_02585 0.63 -0.8 2,700,917 - ECD_02585 0.63 -0.4 2,700,917 - ECD_02585 0.63 +0.3 2,700,917 - ECD_02585 0.63 -0.5 2,700,917 - ECD_02585 0.63 -0.2 2,701,102 + ECD_02585 0.87 +0.2 2,701,102 + ECD_02585 0.87 +0.4 2,701,103 - ECD_02585 0.87 -0.4 2,701,103 - ECD_02585 0.87 +0.1 2,701,103 - ECD_02585 0.87 -0.0 2,701,103 - ECD_02585 0.87 -1.0 2,701,103 - ECD_02585 0.87 +1.1 2,701,103 - ECD_02585 0.87 -0.4 2,701,103 - ECD_02585 0.87 +1.5 2,701,103 - ECD_02585 0.87 +0.0 2,701,103 - ECD_02585 0.87 -0.2 2,701,103 - ECD_02585 0.87 +0.1 2,701,138 + +0.6 2,701,139 - +0.6 2,701,161 - +0.3 2,701,161 - +0.1 2,701,161 - -0.7 2,701,234 + -0.1 2,701,234 + +0.8 2,701,234 + +0.5 2,701,235 - -0.3 2,701,235 - +0.5 2,701,235 - +0.6 2,701,235 - -0.1 2,701,239 + -0.1 2,701,240 - +0.1 2,701,269 + +0.1 2,701,277 - +0.0 2,701,277 - +0.0 2,701,277 - -0.2 2,701,286 - -0.1 2,701,347 + -0.6
Or see this region's nucleotide sequence