Experiment: Bas06
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00845 and ECD_00846 are separated by 1 nucleotides ECD_00846 and ECD_00847 overlap by 29 nucleotides ECD_00847 and ECD_00848 overlap by 1 nucleotides
ECD_00845: ECD_00845 - hypothetical protein, at 888,448 to 890,070
_00845
ECD_00846: ECD_00846 - hypothetical protein, at 890,072 to 890,509
_00846
ECD_00847: ECD_00847 - e14 prophage; putative tail fiber assembly protein, at 890,481 to 891,083
_00847
ECD_00848: ECD_00848 - bacteriophage tail fiber protein, at 891,083 to 891,622
_00848
Position (kb) 890
891 Strain fitness (log2 ratio) -1
0
1 at 889.105 kb on - strand, within ECD_00845 at 889.455 kb on + strand, within ECD_00845 at 889.514 kb on + strand, within ECD_00845 at 889.514 kb on + strand, within ECD_00845 at 889.515 kb on - strand, within ECD_00845 at 889.515 kb on - strand, within ECD_00845 at 889.551 kb on + strand, within ECD_00845 at 889.570 kb on + strand, within ECD_00845 at 889.570 kb on + strand, within ECD_00845 at 889.593 kb on + strand, within ECD_00845 at 889.593 kb on + strand, within ECD_00845 at 889.598 kb on + strand, within ECD_00845 at 889.687 kb on + strand, within ECD_00845 at 889.860 kb on + strand, within ECD_00845 at 889.894 kb on + strand, within ECD_00845 at 889.894 kb on + strand, within ECD_00845 at 889.935 kb on - strand at 889.971 kb on + strand at 889.971 kb on + strand at 889.972 kb on - strand at 890.081 kb on + strand at 890.225 kb on - strand, within ECD_00846 at 890.225 kb on - strand, within ECD_00846 at 890.319 kb on + strand, within ECD_00846 at 890.320 kb on - strand, within ECD_00846 at 890.339 kb on + strand, within ECD_00846 at 890.471 kb on - strand at 890.554 kb on + strand, within ECD_00847 at 890.571 kb on - strand, within ECD_00847 at 890.633 kb on + strand, within ECD_00847 at 890.715 kb on - strand, within ECD_00847 at 890.715 kb on - strand, within ECD_00847 at 890.715 kb on - strand, within ECD_00847 at 890.835 kb on - strand, within ECD_00847 at 891.021 kb on - strand, within ECD_00847 at 891.102 kb on + strand at 891.145 kb on - strand, within ECD_00848 at 891.363 kb on - strand, within ECD_00848 at 891.386 kb on - strand, within ECD_00848
Per-strain Table
Position Strand Gene LocusTag Fraction Bas06 remove 889,105 - ECD_00845 0.40 +0.4 889,455 + ECD_00845 0.62 +0.5 889,514 + ECD_00845 0.66 +0.0 889,514 + ECD_00845 0.66 -0.3 889,515 - ECD_00845 0.66 +0.0 889,515 - ECD_00845 0.66 +0.3 889,551 + ECD_00845 0.68 +0.5 889,570 + ECD_00845 0.69 +0.5 889,570 + ECD_00845 0.69 +0.3 889,593 + ECD_00845 0.71 +0.3 889,593 + ECD_00845 0.71 -0.1 889,598 + ECD_00845 0.71 +0.8 889,687 + ECD_00845 0.76 +0.9 889,860 + ECD_00845 0.87 -1.1 889,894 + ECD_00845 0.89 -0.2 889,894 + ECD_00845 0.89 -0.6 889,935 - +0.3 889,971 + -0.3 889,971 + +0.1 889,972 - +0.2 890,081 + -0.8 890,225 - ECD_00846 0.35 -0.9 890,225 - ECD_00846 0.35 -0.1 890,319 + ECD_00846 0.56 -0.6 890,320 - ECD_00846 0.57 -0.8 890,339 + ECD_00846 0.61 -0.0 890,471 - +0.4 890,554 + ECD_00847 0.12 +0.0 890,571 - ECD_00847 0.15 +0.8 890,633 + ECD_00847 0.25 +0.9 890,715 - ECD_00847 0.39 -1.0 890,715 - ECD_00847 0.39 +0.1 890,715 - ECD_00847 0.39 -0.6 890,835 - ECD_00847 0.59 -0.5 891,021 - ECD_00847 0.90 -0.4 891,102 + -1.0 891,145 - ECD_00848 0.11 +0.4 891,363 - ECD_00848 0.52 +0.1 891,386 - ECD_00848 0.56 +0.5
Or see this region's nucleotide sequence