Strain Fitness in Escherichia coli BL21 around ECD_03758

Experiment: Bas06

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03756 and ECD_03757 are separated by 216 nucleotidesECD_03757 and ECD_03758 are separated by 7 nucleotidesECD_03758 and ECD_03759 are separated by 101 nucleotides ECD_03756: ECD_03756 - GTP-binding protein, at 3,965,105 to 3,966,928 _03756 ECD_03757: ECD_03757 - putative DNA-binding transcriptional regulator, at 3,967,145 to 3,967,855 _03757 ECD_03758: ECD_03758 - putative sugar phosphate isomerase, at 3,967,863 to 3,968,843 _03758 ECD_03759: ECD_03759 - MFS transporter family protein, at 3,968,945 to 3,970,210 _03759 Position (kb) 3967 3968 3969Strain fitness (log2 ratio) -2 -1 0 1at 3966.927 kb on - strandat 3967.007 kb on + strandat 3967.008 kb on - strandat 3967.016 kb on + strandat 3967.016 kb on + strandat 3967.016 kb on + strandat 3967.018 kb on + strandat 3967.058 kb on - strandat 3967.072 kb on - strandat 3967.140 kb on - strandat 3967.168 kb on - strandat 3967.270 kb on + strand, within ECD_03757at 3967.370 kb on - strand, within ECD_03757at 3967.556 kb on - strand, within ECD_03757at 3967.578 kb on - strand, within ECD_03757at 3967.578 kb on - strand, within ECD_03757at 3967.579 kb on + strand, within ECD_03757at 3967.579 kb on + strand, within ECD_03757at 3967.579 kb on + strand, within ECD_03757at 3967.580 kb on - strand, within ECD_03757at 3967.582 kb on + strand, within ECD_03757at 3967.724 kb on + strand, within ECD_03757at 3967.724 kb on + strand, within ECD_03757at 3968.117 kb on + strand, within ECD_03758at 3968.218 kb on - strand, within ECD_03758at 3968.239 kb on + strand, within ECD_03758at 3968.239 kb on + strand, within ECD_03758at 3968.240 kb on - strand, within ECD_03758at 3968.268 kb on + strand, within ECD_03758at 3968.273 kb on - strand, within ECD_03758at 3968.546 kb on + strand, within ECD_03758at 3968.614 kb on - strand, within ECD_03758at 3968.882 kb on + strandat 3969.006 kb on - strandat 3969.164 kb on + strand, within ECD_03759at 3969.164 kb on + strand, within ECD_03759at 3969.198 kb on + strand, within ECD_03759at 3969.415 kb on + strand, within ECD_03759at 3969.464 kb on + strand, within ECD_03759at 3969.604 kb on + strand, within ECD_03759at 3969.648 kb on - strand, within ECD_03759at 3969.648 kb on - strand, within ECD_03759at 3969.689 kb on + strand, within ECD_03759at 3969.690 kb on - strand, within ECD_03759at 3969.690 kb on - strand, within ECD_03759at 3969.694 kb on - strand, within ECD_03759at 3969.694 kb on - strand, within ECD_03759at 3969.694 kb on - strand, within ECD_03759at 3969.738 kb on - strand, within ECD_03759at 3969.810 kb on - strand, within ECD_03759at 3969.810 kb on - strand, within ECD_03759at 3969.810 kb on - strand, within ECD_03759at 3969.813 kb on + strand, within ECD_03759at 3969.813 kb on + strand, within ECD_03759at 3969.813 kb on + strand, within ECD_03759at 3969.813 kb on + strand, within ECD_03759at 3969.813 kb on + strand, within ECD_03759at 3969.813 kb on + strand, within ECD_03759at 3969.813 kb on + strand, within ECD_03759at 3969.814 kb on - strand, within ECD_03759at 3969.818 kb on + strand, within ECD_03759at 3969.818 kb on + strand, within ECD_03759at 3969.818 kb on + strand, within ECD_03759at 3969.819 kb on - strand, within ECD_03759

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas06
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3,966,927 - -0.2
3,967,007 + +0.5
3,967,008 - +0.2
3,967,016 + -0.6
3,967,016 + -0.3
3,967,016 + +0.8
3,967,018 + -0.2
3,967,058 - +1.2
3,967,072 - +0.1
3,967,140 - +0.7
3,967,168 - -0.6
3,967,270 + ECD_03757 0.18 -0.6
3,967,370 - ECD_03757 0.32 +0.7
3,967,556 - ECD_03757 0.58 +0.2
3,967,578 - ECD_03757 0.61 -0.0
3,967,578 - ECD_03757 0.61 -0.4
3,967,579 + ECD_03757 0.61 -0.9
3,967,579 + ECD_03757 0.61 +0.1
3,967,579 + ECD_03757 0.61 +0.0
3,967,580 - ECD_03757 0.61 -0.2
3,967,582 + ECD_03757 0.61 +0.3
3,967,724 + ECD_03757 0.81 -0.4
3,967,724 + ECD_03757 0.81 -0.1
3,968,117 + ECD_03758 0.26 -0.6
3,968,218 - ECD_03758 0.36 -0.8
3,968,239 + ECD_03758 0.38 +1.6
3,968,239 + ECD_03758 0.38 +0.3
3,968,240 - ECD_03758 0.38 -0.2
3,968,268 + ECD_03758 0.41 -0.1
3,968,273 - ECD_03758 0.42 +0.1
3,968,546 + ECD_03758 0.70 -0.1
3,968,614 - ECD_03758 0.77 +0.2
3,968,882 + -0.3
3,969,006 - +0.7
3,969,164 + ECD_03759 0.17 -0.0
3,969,164 + ECD_03759 0.17 -0.8
3,969,198 + ECD_03759 0.20 -0.5
3,969,415 + ECD_03759 0.37 +0.3
3,969,464 + ECD_03759 0.41 +0.1
3,969,604 + ECD_03759 0.52 -0.5
3,969,648 - ECD_03759 0.56 -0.4
3,969,648 - ECD_03759 0.56 +0.8
3,969,689 + ECD_03759 0.59 -1.8
3,969,690 - ECD_03759 0.59 +0.2
3,969,690 - ECD_03759 0.59 +0.8
3,969,694 - ECD_03759 0.59 -0.9
3,969,694 - ECD_03759 0.59 -1.5
3,969,694 - ECD_03759 0.59 -0.3
3,969,738 - ECD_03759 0.63 +0.6
3,969,810 - ECD_03759 0.68 -0.3
3,969,810 - ECD_03759 0.68 -1.2
3,969,810 - ECD_03759 0.68 -0.1
3,969,813 + ECD_03759 0.69 -0.2
3,969,813 + ECD_03759 0.69 +0.4
3,969,813 + ECD_03759 0.69 -0.0
3,969,813 + ECD_03759 0.69 -0.4
3,969,813 + ECD_03759 0.69 -0.1
3,969,813 + ECD_03759 0.69 +0.4
3,969,813 + ECD_03759 0.69 +0.1
3,969,814 - ECD_03759 0.69 +0.4
3,969,818 + ECD_03759 0.69 +0.7
3,969,818 + ECD_03759 0.69 -0.6
3,969,818 + ECD_03759 0.69 +0.5
3,969,819 - ECD_03759 0.69 -0.2

Or see this region's nucleotide sequence