Strain Fitness in Escherichia coli BL21 around ECD_00744

Experiment: Bas06

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00743 and ECD_00744 overlap by 14 nucleotidesECD_00744 and ECD_00745 overlap by 8 nucleotides ECD_00743: ECD_00743 - 8-amino-7-oxononanoate synthase, at 794,374 to 795,528 _00743 ECD_00744: ECD_00744 - malonyl-ACP O-methyltransferase, SAM-dependent, at 795,515 to 796,270 _00744 ECD_00745: ECD_00745 - dethiobiotin synthetase, at 796,263 to 796,940 _00745 Position (kb) 795 796 797Strain fitness (log2 ratio) -2 -1 0 1at 794.518 kb on + strand, within ECD_00743at 794.547 kb on + strand, within ECD_00743at 794.548 kb on - strand, within ECD_00743at 794.619 kb on + strand, within ECD_00743at 794.619 kb on + strand, within ECD_00743at 794.688 kb on + strand, within ECD_00743at 794.952 kb on - strand, within ECD_00743at 795.160 kb on - strand, within ECD_00743at 795.163 kb on + strand, within ECD_00743at 795.174 kb on + strand, within ECD_00743at 795.175 kb on - strand, within ECD_00743at 795.200 kb on + strand, within ECD_00743at 795.200 kb on + strand, within ECD_00743at 795.200 kb on + strand, within ECD_00743at 795.201 kb on - strand, within ECD_00743at 795.354 kb on + strand, within ECD_00743at 795.526 kb on + strandat 795.573 kb on - strandat 795.591 kb on + strand, within ECD_00744at 795.651 kb on + strand, within ECD_00744at 795.651 kb on + strand, within ECD_00744at 795.724 kb on - strand, within ECD_00744at 795.779 kb on + strand, within ECD_00744at 795.779 kb on + strand, within ECD_00744at 796.236 kb on - strandat 796.414 kb on + strand, within ECD_00745at 796.439 kb on - strand, within ECD_00745at 796.477 kb on + strand, within ECD_00745at 796.696 kb on + strand, within ECD_00745at 796.718 kb on + strand, within ECD_00745at 796.719 kb on - strand, within ECD_00745at 796.721 kb on + strand, within ECD_00745at 796.751 kb on - strand, within ECD_00745at 796.825 kb on - strand, within ECD_00745at 796.825 kb on - strand, within ECD_00745at 796.826 kb on + strand, within ECD_00745at 796.950 kb on - strandat 796.950 kb on - strandat 797.165 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas06
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794,518 + ECD_00743 0.12 +0.3
794,547 + ECD_00743 0.15 +0.3
794,548 - ECD_00743 0.15 +0.3
794,619 + ECD_00743 0.21 -0.5
794,619 + ECD_00743 0.21 +0.1
794,688 + ECD_00743 0.27 -1.5
794,952 - ECD_00743 0.50 +0.7
795,160 - ECD_00743 0.68 -0.4
795,163 + ECD_00743 0.68 -0.5
795,174 + ECD_00743 0.69 -0.1
795,175 - ECD_00743 0.69 +0.0
795,200 + ECD_00743 0.72 +0.6
795,200 + ECD_00743 0.72 -1.8
795,200 + ECD_00743 0.72 +1.1
795,201 - ECD_00743 0.72 +0.3
795,354 + ECD_00743 0.85 -1.1
795,526 + +0.6
795,573 - -1.4
795,591 + ECD_00744 0.10 -0.1
795,651 + ECD_00744 0.18 +0.3
795,651 + ECD_00744 0.18 +0.3
795,724 - ECD_00744 0.28 -0.4
795,779 + ECD_00744 0.35 -0.7
795,779 + ECD_00744 0.35 +0.7
796,236 - -0.8
796,414 + ECD_00745 0.22 -0.5
796,439 - ECD_00745 0.26 -0.2
796,477 + ECD_00745 0.32 +0.4
796,696 + ECD_00745 0.64 +0.4
796,718 + ECD_00745 0.67 +0.4
796,719 - ECD_00745 0.67 -1.0
796,721 + ECD_00745 0.68 -1.1
796,751 - ECD_00745 0.72 +1.0
796,825 - ECD_00745 0.83 -0.3
796,825 - ECD_00745 0.83 +1.0
796,826 + ECD_00745 0.83 +0.2
796,950 - +0.2
796,950 - -0.5
797,165 + -1.4

Or see this region's nucleotide sequence