Experiment: Bas06
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00654 and ECD_00655 are separated by 22 nucleotides ECD_00655 and ECD_00656 overlap by 1 nucleotides ECD_00656 and ECD_00657 are separated by 312 nucleotides
ECD_00654: ECD_00654 - potassium translocating ATPase, subunit B, at 684,862 to 686,910
_00654
ECD_00655: ECD_00655 - potassium translocating ATPase, subunit A, at 686,933 to 688,606
_00655
ECD_00656: ECD_00656 - potassium ion accessory transporter subunit, at 688,606 to 688,695
_00656
ECD_00657: ECD_00657 - DUF2517 family protein, at 689,008 to 689,214
_00657
Position (kb) 686
687
688
689 Strain fitness (log2 ratio) -1
0
1 at 686.530 kb on - strand, within ECD_00654 at 686.764 kb on - strand at 686.764 kb on - strand at 686.767 kb on - strand at 686.910 kb on + strand at 687.080 kb on - strand at 687.375 kb on - strand, within ECD_00655 at 687.431 kb on - strand, within ECD_00655 at 687.545 kb on - strand, within ECD_00655 at 687.920 kb on - strand, within ECD_00655 at 687.950 kb on + strand, within ECD_00655 at 688.230 kb on + strand, within ECD_00655 at 688.252 kb on + strand, within ECD_00655 at 688.253 kb on - strand, within ECD_00655 at 688.255 kb on - strand, within ECD_00655 at 688.984 kb on + strand at 689.040 kb on + strand, within ECD_00657
Per-strain Table
Position Strand Gene LocusTag Fraction Bas06 remove 686,530 - ECD_00654 0.81 +0.2 686,764 - -0.2 686,764 - -1.2 686,767 - -1.5 686,910 + +0.0 687,080 - -0.1 687,375 - ECD_00655 0.26 +0.5 687,431 - ECD_00655 0.30 -0.1 687,545 - ECD_00655 0.37 -1.5 687,920 - ECD_00655 0.59 +0.9 687,950 + ECD_00655 0.61 +1.5 688,230 + ECD_00655 0.77 +0.1 688,252 + ECD_00655 0.79 -0.5 688,253 - ECD_00655 0.79 +0.0 688,255 - ECD_00655 0.79 +0.8 688,984 + +0.2 689,040 + ECD_00657 0.15 +0.8
Or see this region's nucleotide sequence