Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24325

Experiment: plant=Cucumber; plant sample=CP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Cucumber; plant sample=CP3; plant location=NA
4,640,876	+				-0.8
4,640,876	+				-1.7
4,640,876	+				+1.0
4,640,877	-				+0.2
4,640,906	+				-0.5
4,640,910	+				+0.3
4,640,910	+				+0.2
4,640,965	+				+1.1
4,640,983	-				+0.5
4,640,998	+				+1.1
4,640,998	+				-0.7
4,640,998	+				+0.3
4,641,001	-				-0.7
4,641,026	-				-1.4
4,641,169	+		LU632_RS24320	0.48	+0.7
4,641,169	+		LU632_RS24320	0.48	+3.8
4,641,236	+		LU632_RS24320	0.70	-1.9
4,641,260	+		LU632_RS24320	0.78	-0.9
4,641,847	+				+0.4
4,641,847	+				-0.3
4,641,847	+				+0.4
4,641,847	+				-0.1
4,641,848	-				+0.2
4,641,848	-				+1.5
4,641,860	-				-0.7
4,641,889	+				+0.0
4,641,929	+				-0.7
4,641,940	-				-1.2
4,641,944	-				-0.7
4,642,434	-		LU632_RS24330	0.33	-1.3