Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18875

Experiment: plant=Cucumber; plant sample=CP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Cucumber; plant sample=CP3; plant location=NA
3,559,796	+				-1.3
3,559,796	+				-0.6
3,559,847	-				+0.7
3,560,082	-		LU632_RS18875	0.18	+0.6
3,561,170	+				-1.0
3,561,175	+				+1.1
3,561,195	+				-0.6
3,561,196	-				+0.6
3,561,266	+				-2.8
3,561,330	+				+1.3
3,561,353	+				+1.8
3,561,395	-				+0.8
3,561,395	-				+0.2
3,561,430	+				-0.3
3,561,431	-				+0.7
3,561,431	-				+0.3
3,561,458	+				-0.7
3,561,458	+				-0.5
3,561,459	+				-0.4
3,561,460	+				+0.8
3,561,460	+				-0.3
3,561,460	+				-0.4
3,561,483	+				+0.2
3,561,483	+				-2.4
3,561,483	+				+0.8
3,561,484	-				+0.3
3,561,484	-				-0.4
3,561,690	-		LU632_RS18880	0.35	+2.4
3,561,844	-		LU632_RS18880	0.67	+2.2
3,562,043	+				-0.4
3,562,043	+				-0.5
3,562,043	+				-0.6
3,562,043	+				+1.2
3,562,043	+				-0.1
3,562,044	-				-1.1
3,562,071	+				+0.4
3,562,074	-				+1.1