Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17835

Experiment: plant=Cucumber; plant sample=CP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Cucumber; plant sample=CP3; plant location=NA
3,359,278	+				+1.6
3,359,279	-				-1.0
3,359,303	-				+0.1
3,359,717	-		LU632_RS17830	0.52	-1.0
3,359,841	+		LU632_RS17830	0.69	-1.0
3,359,913	+		LU632_RS17830	0.79	-1.9
3,360,044	+				+0.2
3,360,134	+				+1.5
3,360,865	+		LU632_RS17835	0.56	+0.3
3,360,920	-		LU632_RS17835	0.60	-0.9
3,360,921	+		LU632_RS17835	0.60	-0.7
3,361,047	-		LU632_RS17835	0.71	-0.5
3,361,054	+		LU632_RS17835	0.71	-1.3
3,361,135	+		LU632_RS17835	0.78	-0.8