Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17350

Experiment: plant=Cucumber; plant sample=CP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Cucumber; plant sample=CP3; plant location=NA
3,261,415	-				-0.7
3,261,565	-				-0.4
3,261,565	-				-1.9
3,261,657	-				+0.1
3,261,705	-				+1.1
3,261,705	-				+0.9
3,261,705	-				-1.0
3,261,705	-				+0.6
3,261,705	-				-1.0
3,261,705	-				-2.4
3,261,727	-				-0.7
3,261,727	-				-0.0
3,261,787	-				-1.0
3,261,787	-				-0.3
3,261,794	-				+0.6
3,261,909	-		LU632_RS17350	0.19	+1.6
3,261,919	+		LU632_RS17350	0.20	-0.8
3,261,919	+		LU632_RS17350	0.20	-0.9
3,261,919	+		LU632_RS17350	0.20	-1.3
3,261,919	+		LU632_RS17350	0.20	-0.5
3,261,919	+		LU632_RS17350	0.20	-0.6
3,261,920	-		LU632_RS17350	0.20	+2.2
3,261,920	-		LU632_RS17350	0.20	-0.3
3,261,920	-		LU632_RS17350	0.20	+1.6
3,261,923	+		LU632_RS17350	0.21	-1.3
3,261,929	+		LU632_RS17350	0.22	-1.5
3,261,933	+		LU632_RS17350	0.22	-2.6
3,262,326	-		LU632_RS17350	0.86	-0.7
3,262,389	+				-0.3
3,262,394	+				+0.5
3,262,394	+				-0.3
3,262,412	-				-1.0