Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS12260

Experiment: plant=Cucumber; plant sample=CP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Cucumber; plant sample=CP3; plant location=NA
2,330,390	+				+0.1
2,330,390	+				+0.5
2,330,391	-				-0.8
2,330,391	-				-0.4
2,330,391	-				+0.8
2,330,393	+				-0.0
2,330,393	+				+0.8
2,330,394	-				+0.3
2,330,394	-				+1.5
2,330,394	-				+0.6
2,330,394	-				-1.2
2,330,395	+				+0.0
2,330,395	+				-1.6
2,330,395	+				+2.4
2,330,396	-				-1.7
2,330,396	-				+1.4
2,330,398	-				-0.9
2,330,398	-				-0.7
2,330,553	-				+2.4
2,330,634	+		LU632_RS12260	0.19	+0.1
2,330,634	+		LU632_RS12260	0.19	+0.5
2,331,112	-				-0.5