Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11990

Experiment: plant=Cucumber; plant sample=CP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Cucumber; plant sample=CP3; plant location=NA
2,276,422	+				-1.9
2,276,490	+				+0.4
2,276,491	-				+1.9
2,276,492	+				+0.0
2,276,573	+				+4.8
2,276,574	-				-0.3
2,276,574	-				+0.5
2,276,578	-				+0.2
2,276,581	-				+1.2
2,276,593	+				+0.0
2,276,699	-				+0.5
2,277,095	+	dbpA	LU632_RS11995	0.31	+0.7
2,277,095	+	dbpA	LU632_RS11995	0.31	-0.0
2,277,096	-	dbpA	LU632_RS11995	0.31	+1.1
2,277,260	-	dbpA	LU632_RS11995	0.43	+1.4
2,277,280	-	dbpA	LU632_RS11995	0.45	+0.3
2,277,280	-	dbpA	LU632_RS11995	0.45	-0.5
2,277,291	+	dbpA	LU632_RS11995	0.46	+0.3