Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11970

Experiment: plant=Cucumber; plant sample=CP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Cucumber; plant sample=CP3; plant location=NA
2,270,786	+		LU632_RS11965	0.79	-0.3
2,270,786	+		LU632_RS11965	0.79	+1.0
2,270,787	-		LU632_RS11965	0.79	+0.8
2,270,787	-		LU632_RS11965	0.79	-1.7
2,270,787	-		LU632_RS11965	0.79	+2.7
2,270,970	-				-1.5
2,271,021	+				+1.6
2,271,073	-				-0.8
2,271,091	+				+0.4
2,271,237	+				-0.9
2,271,257	-				-3.5
2,271,293	+				+1.3
2,271,293	+				+0.4
2,271,307	+				+0.1
2,271,308	-				-2.3
2,271,344	+				-0.5
2,271,344	+				-1.5
2,271,387	+				-1.1
2,271,395	+				-1.3
2,271,404	-				-2.5
2,271,404	-				+1.5
2,271,433	-				-0.6
2,271,463	+				-2.8
2,271,497	+				-0.0
2,271,497	+				-1.7
2,271,498	-				+1.3
2,271,498	-				-0.7
2,271,549	+				-0.3
2,271,556	+				-0.9
2,271,557	-				-1.7
2,271,558	+				+2.2
2,271,558	+				-0.9
2,271,558	+				-0.6
2,271,559	-				-2.0
2,271,559	-				+2.9
2,271,559	-				+0.1
2,271,559	-				-0.1
2,271,559	-				+0.3
2,271,563	+				-1.0
2,271,564	-				-0.9
2,271,569	-				-0.2
2,271,650	+				-0.3
2,273,117	-				+1.9
2,273,150	+				+0.8
2,273,297	-		LU632_RS11975	0.20	+0.4
2,273,331	-		LU632_RS11975	0.23	+1.3