Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04150

Experiment: plant=Cucumber; plant sample=CP3; plant location=NA

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	plant=Cucumber; plant sample=CP3; plant location=NA
822,988	+	istB	LU632_RS04150	0.60	-0.9
823,392	-				-0.3
823,550	+				-0.1
823,551	-				-0.1
823,890	+				-0.2
823,898	+				+1.9
823,994	+				+1.1
823,994	+				-0.6
823,995	-				-0.6
824,016	-		LU632_RS04155	0.10	-1.2
824,157	-		LU632_RS04155	0.19	-0.3
824,168	+		LU632_RS04155	0.19	-1.2
824,210	+		LU632_RS04155	0.22	-1.2
824,211	-		LU632_RS04155	0.22	-0.1
824,236	-		LU632_RS04155	0.23	+0.2
824,238	-		LU632_RS04155	0.23	-0.2
824,238	-		LU632_RS04155	0.23	-0.2
824,238	-		LU632_RS04155	0.23	-1.9
824,238	-		LU632_RS04155	0.23	-0.2
824,238	-		LU632_RS04155	0.23	+0.3
824,242	-		LU632_RS04155	0.24	+0.9