Experiment: Bas14
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03607 and ECD_03608 are separated by 285 nucleotides ECD_03608 and ECD_03609 are separated by 14 nucleotides ECD_03609 and ECD_03610 are separated by 182 nucleotides
ECD_03607: ECD_03607 - transcriptional antiterminator of the bgl operon, at 3,794,533 to 3,795,369
_03607
ECD_03608: ECD_03608 - negative regulator of PhoR/PhoB two-component regulator, at 3,795,655 to 3,796,380
_03608
ECD_03609: ECD_03609 - phosphate ABC transporter ATPase, at 3,796,395 to 3,797,168
_03609
ECD_03610: ECD_03610 - phosphate ABC transporter permease, at 3,797,351 to 3,798,241
_03610
Position (kb)
3795
3796
3797 Strain fitness (log2 ratio)
-1
0
1 at 3794.833 kb on + strand, within ECD_03607 at 3795.031 kb on + strand, within ECD_03607 at 3795.031 kb on + strand, within ECD_03607 at 3795.032 kb on - strand, within ECD_03607 at 3795.051 kb on + strand, within ECD_03607 at 3795.087 kb on - strand, within ECD_03607 at 3795.091 kb on - strand, within ECD_03607 at 3795.091 kb on - strand, within ECD_03607 at 3795.132 kb on + strand, within ECD_03607 at 3795.133 kb on - strand, within ECD_03607 at 3795.135 kb on + strand, within ECD_03607 at 3795.136 kb on - strand, within ECD_03607 at 3795.168 kb on + strand, within ECD_03607 at 3795.169 kb on - strand, within ECD_03607 at 3795.656 kb on + strand at 3796.418 kb on - strand at 3797.216 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas14 remove 3,794,833 + ECD_03607 0.36 -0.8 3,795,031 + ECD_03607 0.59 +0.5 3,795,031 + ECD_03607 0.59 -0.1 3,795,032 - ECD_03607 0.60 +0.1 3,795,051 + ECD_03607 0.62 +0.9 3,795,087 - ECD_03607 0.66 +0.2 3,795,091 - ECD_03607 0.67 -0.7 3,795,091 - ECD_03607 0.67 -1.3 3,795,132 + ECD_03607 0.72 -0.2 3,795,133 - ECD_03607 0.72 -1.0 3,795,135 + ECD_03607 0.72 -0.1 3,795,136 - ECD_03607 0.72 -0.4 3,795,168 + ECD_03607 0.76 -1.0 3,795,169 - ECD_03607 0.76 +0.1 3,795,656 + +0.1 3,796,418 - +1.4 3,797,216 - -0.2
Or see this region's nucleotide sequence