Experiment: Bas14
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02650 and ECD_02651 overlap by 50 nucleotides ECD_02651 and ECD_02652 are separated by 3 nucleotides
ECD_02650: ECD_02650 - D-ribose-binding periplasmic protein, at 2,769,884 to 2,770,957
_02650
ECD_02651: ECD_02651 - Ribose transport system permease protein rbsC, at 2,770,908 to 2,771,891
_02651
ECD_02652: ECD_02652 - hypothetical protein, at 2,771,895 to 2,773,394
_02652
Position (kb)
2770
2771
2772 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2770.088 kb on - strand, within ECD_02650 at 2770.088 kb on - strand, within ECD_02650 at 2770.088 kb on - strand, within ECD_02650 at 2770.284 kb on - strand, within ECD_02650 at 2770.376 kb on - strand, within ECD_02650 at 2770.396 kb on + strand, within ECD_02650 at 2770.660 kb on - strand, within ECD_02650 at 2770.660 kb on - strand, within ECD_02650 at 2770.761 kb on - strand, within ECD_02650 at 2770.806 kb on - strand, within ECD_02650 at 2770.812 kb on + strand, within ECD_02650 at 2770.813 kb on - strand, within ECD_02650 at 2770.816 kb on + strand, within ECD_02650 at 2770.817 kb on - strand, within ECD_02650 at 2770.905 kb on - strand at 2770.932 kb on - strand at 2771.136 kb on + strand, within ECD_02651 at 2771.137 kb on - strand, within ECD_02651 at 2771.197 kb on - strand, within ECD_02651 at 2771.197 kb on - strand, within ECD_02651 at 2771.278 kb on - strand, within ECD_02651 at 2771.285 kb on - strand, within ECD_02651 at 2771.320 kb on + strand, within ECD_02651 at 2771.321 kb on - strand, within ECD_02651 at 2771.321 kb on - strand, within ECD_02651 at 2771.337 kb on + strand, within ECD_02651 at 2771.426 kb on - strand, within ECD_02651 at 2771.454 kb on - strand, within ECD_02651 at 2771.460 kb on - strand, within ECD_02651 at 2771.496 kb on - strand, within ECD_02651 at 2771.496 kb on - strand, within ECD_02651 at 2771.573 kb on + strand, within ECD_02651 at 2771.577 kb on - strand, within ECD_02651 at 2771.703 kb on - strand, within ECD_02651 at 2772.569 kb on + strand, within ECD_02652 at 2772.606 kb on + strand, within ECD_02652 at 2772.715 kb on + strand, within ECD_02652 at 2772.734 kb on - strand, within ECD_02652 at 2772.734 kb on - strand, within ECD_02652 at 2772.772 kb on - strand, within ECD_02652 at 2772.803 kb on - strand, within ECD_02652 at 2772.884 kb on + strand, within ECD_02652
Per-strain Table
Position Strand Gene LocusTag Fraction Bas14 remove 2,770,088 - ECD_02650 0.19 +0.5 2,770,088 - ECD_02650 0.19 -2.8 2,770,088 - ECD_02650 0.19 -0.8 2,770,284 - ECD_02650 0.37 +0.1 2,770,376 - ECD_02650 0.46 -0.1 2,770,396 + ECD_02650 0.48 +0.5 2,770,660 - ECD_02650 0.72 -0.3 2,770,660 - ECD_02650 0.72 -0.2 2,770,761 - ECD_02650 0.82 +0.3 2,770,806 - ECD_02650 0.86 -0.3 2,770,812 + ECD_02650 0.86 +0.5 2,770,813 - ECD_02650 0.86 -0.7 2,770,816 + ECD_02650 0.87 -0.5 2,770,817 - ECD_02650 0.87 +1.1 2,770,905 - +0.2 2,770,932 - -0.3 2,771,136 + ECD_02651 0.23 +0.0 2,771,137 - ECD_02651 0.23 +0.6 2,771,197 - ECD_02651 0.29 +0.2 2,771,197 - ECD_02651 0.29 -1.1 2,771,278 - ECD_02651 0.38 +0.2 2,771,285 - ECD_02651 0.38 -0.3 2,771,320 + ECD_02651 0.42 -0.0 2,771,321 - ECD_02651 0.42 -0.9 2,771,321 - ECD_02651 0.42 +0.2 2,771,337 + ECD_02651 0.44 -0.9 2,771,426 - ECD_02651 0.53 -0.7 2,771,454 - ECD_02651 0.55 +0.6 2,771,460 - ECD_02651 0.56 -0.0 2,771,496 - ECD_02651 0.60 -0.2 2,771,496 - ECD_02651 0.60 -0.5 2,771,573 + ECD_02651 0.68 -1.5 2,771,577 - ECD_02651 0.68 -0.5 2,771,703 - ECD_02651 0.81 -1.0 2,772,569 + ECD_02652 0.45 -0.0 2,772,606 + ECD_02652 0.47 +0.3 2,772,715 + ECD_02652 0.55 +0.2 2,772,734 - ECD_02652 0.56 +0.3 2,772,734 - ECD_02652 0.56 -1.1 2,772,772 - ECD_02652 0.58 +0.9 2,772,803 - ECD_02652 0.61 -1.5 2,772,884 + ECD_02652 0.66 -0.2
Or see this region's nucleotide sequence