Strain Fitness in Bosea sp. OAE506 around ABIE41_RS02380

Experiment: R2A no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS02375 and ABIE41_RS02380 are separated by 138 nucleotidesABIE41_RS02380 and ABIE41_RS02385 are separated by 110 nucleotides ABIE41_RS02375: ABIE41_RS02375 - extracellular solute-binding protein, at 472,926 to 473,969 _RS02375 ABIE41_RS02380: ABIE41_RS02380 - DeoR/GlpR family DNA-binding transcription regulator, at 474,108 to 474,923 _RS02380 ABIE41_RS02385: ABIE41_RS02385 - SIS domain-containing protein, at 475,034 to 476,167 _RS02385 Position (kb) 474 475Strain fitness (log2 ratio) -1 0 1 2at 473.166 kb on - strand, within ABIE41_RS02375at 473.237 kb on - strand, within ABIE41_RS02375at 473.488 kb on + strand, within ABIE41_RS02375at 473.488 kb on + strand, within ABIE41_RS02375at 473.489 kb on - strand, within ABIE41_RS02375at 473.489 kb on - strand, within ABIE41_RS02375at 473.569 kb on + strand, within ABIE41_RS02375at 473.569 kb on + strand, within ABIE41_RS02375at 473.569 kb on + strand, within ABIE41_RS02375at 473.569 kb on + strand, within ABIE41_RS02375at 473.569 kb on + strand, within ABIE41_RS02375at 473.570 kb on - strand, within ABIE41_RS02375at 473.570 kb on - strand, within ABIE41_RS02375at 473.570 kb on - strand, within ABIE41_RS02375at 473.593 kb on + strand, within ABIE41_RS02375at 473.600 kb on - strand, within ABIE41_RS02375at 473.600 kb on - strand, within ABIE41_RS02375at 473.720 kb on - strand, within ABIE41_RS02375at 475.295 kb on + strand, within ABIE41_RS02385at 475.295 kb on + strand, within ABIE41_RS02385at 475.296 kb on - strand, within ABIE41_RS02385at 475.296 kb on - strand, within ABIE41_RS02385at 475.296 kb on - strand, within ABIE41_RS02385at 475.328 kb on + strand, within ABIE41_RS02385at 475.328 kb on + strand, within ABIE41_RS02385at 475.353 kb on - strand, within ABIE41_RS02385at 475.353 kb on - strand, within ABIE41_RS02385at 475.461 kb on - strand, within ABIE41_RS02385at 475.703 kb on + strand, within ABIE41_RS02385at 475.703 kb on + strand, within ABIE41_RS02385at 475.703 kb on + strand, within ABIE41_RS02385at 475.703 kb on + strand, within ABIE41_RS02385at 475.704 kb on - strand, within ABIE41_RS02385at 475.856 kb on + strand, within ABIE41_RS02385at 475.856 kb on + strand, within ABIE41_RS02385at 475.856 kb on + strand, within ABIE41_RS02385at 475.856 kb on + strand, within ABIE41_RS02385at 475.856 kb on + strand, within ABIE41_RS02385at 475.856 kb on + strand, within ABIE41_RS02385at 475.857 kb on - strand, within ABIE41_RS02385

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A no stress control
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473,166 - ABIE41_RS02375 0.23 -0.7
473,237 - ABIE41_RS02375 0.30 -0.1
473,488 + ABIE41_RS02375 0.54 +0.4
473,488 + ABIE41_RS02375 0.54 +0.8
473,489 - ABIE41_RS02375 0.54 +1.1
473,489 - ABIE41_RS02375 0.54 +1.8
473,569 + ABIE41_RS02375 0.62 +0.8
473,569 + ABIE41_RS02375 0.62 +0.2
473,569 + ABIE41_RS02375 0.62 -0.4
473,569 + ABIE41_RS02375 0.62 +0.4
473,569 + ABIE41_RS02375 0.62 +0.3
473,570 - ABIE41_RS02375 0.62 +0.7
473,570 - ABIE41_RS02375 0.62 -1.0
473,570 - ABIE41_RS02375 0.62 -0.6
473,593 + ABIE41_RS02375 0.64 -0.5
473,600 - ABIE41_RS02375 0.65 +0.2
473,600 - ABIE41_RS02375 0.65 -0.3
473,720 - ABIE41_RS02375 0.76 +0.7
475,295 + ABIE41_RS02385 0.23 -0.5
475,295 + ABIE41_RS02385 0.23 -0.3
475,296 - ABIE41_RS02385 0.23 -0.1
475,296 - ABIE41_RS02385 0.23 -0.0
475,296 - ABIE41_RS02385 0.23 +1.6
475,328 + ABIE41_RS02385 0.26 +0.5
475,328 + ABIE41_RS02385 0.26 +0.7
475,353 - ABIE41_RS02385 0.28 +0.1
475,353 - ABIE41_RS02385 0.28 +1.0
475,461 - ABIE41_RS02385 0.38 -0.0
475,703 + ABIE41_RS02385 0.59 +0.3
475,703 + ABIE41_RS02385 0.59 -0.3
475,703 + ABIE41_RS02385 0.59 +1.1
475,703 + ABIE41_RS02385 0.59 -0.5
475,704 - ABIE41_RS02385 0.59 -0.2
475,856 + ABIE41_RS02385 0.72 +0.8
475,856 + ABIE41_RS02385 0.72 +0.6
475,856 + ABIE41_RS02385 0.72 -0.2
475,856 + ABIE41_RS02385 0.72 -1.2
475,856 + ABIE41_RS02385 0.72 +0.1
475,856 + ABIE41_RS02385 0.72 -0.1
475,857 - ABIE41_RS02385 0.73 +0.0

Or see this region's nucleotide sequence