Strain Fitness in Escherichia coli BL21 around ECD_02283

Experiment: Bas52

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02282 and ECD_02283 are separated by 69 nucleotidesECD_02283 and ECD_02284 are separated by 53 nucleotides ECD_02282: ECD_02282 - putative transporter, at 2,367,130 to 2,368,074 _02282 ECD_02283: ECD_02283 - oxalyl CoA decarboxylase, ThDP-dependent, at 2,368,144 to 2,369,838 _02283 ECD_02284: ECD_02284 - formyl-CoA transferase, NAD(P)-binding, at 2,369,892 to 2,371,142 _02284 Position (kb) 2368 2369 2370Strain fitness (log2 ratio) -1 0 1at 2367.152 kb on + strandat 2368.224 kb on + strandat 2368.298 kb on + strandat 2368.450 kb on - strand, within ECD_02283at 2368.954 kb on - strand, within ECD_02283at 2368.975 kb on - strand, within ECD_02283at 2369.076 kb on + strand, within ECD_02283at 2369.487 kb on - strand, within ECD_02283at 2369.760 kb on - strandat 2370.507 kb on + strand, within ECD_02284at 2370.735 kb on + strand, within ECD_02284at 2370.736 kb on - strand, within ECD_02284

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas52
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2,367,152 + +0.3
2,368,224 + +1.2
2,368,298 + +0.4
2,368,450 - ECD_02283 0.18 -0.9
2,368,954 - ECD_02283 0.48 +0.5
2,368,975 - ECD_02283 0.49 +1.3
2,369,076 + ECD_02283 0.55 +0.6
2,369,487 - ECD_02283 0.79 +0.9
2,369,760 - -0.2
2,370,507 + ECD_02284 0.49 -0.4
2,370,735 + ECD_02284 0.67 +1.2
2,370,736 - ECD_02284 0.67 +1.3

Or see this region's nucleotide sequence