Experiment: Bas52
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00351 and ECD_00352 are separated by 4 nucleotides ECD_00352 and ECD_00353 are separated by 92 nucleotides
ECD_00351: ECD_00351 - maltodextrin glucosidase, at 387,917 to 389,734
_00351
ECD_00352: ECD_00352 - acyl carrier protein (ACP) phosphodiesterase; ACP hydrolyase, at 389,739 to 390,320
_00352
ECD_00353: ECD_00353 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 390,413 to 391,483
_00353
Position (kb) 389
390
391 Strain fitness (log2 ratio) -1
0
1
2
3 at 388.761 kb on - strand, within ECD_00351 at 388.768 kb on + strand, within ECD_00351 at 388.803 kb on - strand, within ECD_00351 at 388.826 kb on + strand, within ECD_00351 at 388.873 kb on + strand, within ECD_00351 at 388.936 kb on + strand, within ECD_00351 at 388.937 kb on - strand, within ECD_00351 at 388.967 kb on - strand, within ECD_00351 at 388.969 kb on + strand, within ECD_00351 at 388.970 kb on - strand, within ECD_00351 at 389.025 kb on - strand, within ECD_00351 at 389.025 kb on - strand, within ECD_00351 at 389.097 kb on - strand, within ECD_00351 at 389.097 kb on - strand, within ECD_00351 at 389.097 kb on - strand, within ECD_00351 at 389.097 kb on - strand, within ECD_00351 at 389.097 kb on - strand, within ECD_00351 at 389.182 kb on + strand, within ECD_00351 at 389.198 kb on - strand, within ECD_00351 at 389.232 kb on + strand, within ECD_00351 at 389.232 kb on + strand, within ECD_00351 at 389.233 kb on - strand, within ECD_00351 at 389.233 kb on - strand, within ECD_00351 at 389.236 kb on + strand, within ECD_00351 at 389.237 kb on - strand, within ECD_00351 at 389.237 kb on - strand, within ECD_00351 at 389.242 kb on + strand, within ECD_00351 at 389.263 kb on + strand, within ECD_00351 at 389.346 kb on + strand, within ECD_00351 at 389.358 kb on - strand, within ECD_00351 at 389.440 kb on + strand, within ECD_00351 at 389.459 kb on + strand, within ECD_00351 at 389.525 kb on + strand, within ECD_00351 at 389.526 kb on - strand, within ECD_00351 at 389.537 kb on - strand, within ECD_00351 at 389.733 kb on - strand at 389.740 kb on + strand at 389.945 kb on - strand, within ECD_00352 at 390.099 kb on - strand, within ECD_00352 at 390.172 kb on - strand, within ECD_00352 at 390.172 kb on - strand, within ECD_00352 at 390.172 kb on - strand, within ECD_00352 at 390.191 kb on + strand, within ECD_00352 at 390.191 kb on + strand, within ECD_00352 at 390.192 kb on - strand, within ECD_00352 at 390.192 kb on - strand, within ECD_00352 at 390.192 kb on - strand, within ECD_00352 at 390.259 kb on - strand, within ECD_00352 at 390.294 kb on + strand at 390.326 kb on - strand at 390.327 kb on + strand at 390.327 kb on + strand at 390.332 kb on + strand at 390.332 kb on + strand at 390.484 kb on + strand at 390.536 kb on - strand, within ECD_00353 at 390.866 kb on + strand, within ECD_00353 at 390.866 kb on + strand, within ECD_00353 at 391.186 kb on - strand, within ECD_00353 at 391.261 kb on + strand, within ECD_00353
Per-strain Table
Position Strand Gene LocusTag Fraction Bas52 remove 388,761 - ECD_00351 0.46 -0.3 388,768 + ECD_00351 0.47 +0.2 388,803 - ECD_00351 0.49 -1.3 388,826 + ECD_00351 0.50 -0.7 388,873 + ECD_00351 0.53 +0.3 388,936 + ECD_00351 0.56 +1.0 388,937 - ECD_00351 0.56 -0.1 388,967 - ECD_00351 0.58 -0.0 388,969 + ECD_00351 0.58 -0.1 388,970 - ECD_00351 0.58 +0.7 389,025 - ECD_00351 0.61 -0.3 389,025 - ECD_00351 0.61 +0.1 389,097 - ECD_00351 0.65 +0.7 389,097 - ECD_00351 0.65 +0.2 389,097 - ECD_00351 0.65 -0.0 389,097 - ECD_00351 0.65 -0.3 389,097 - ECD_00351 0.65 -0.3 389,182 + ECD_00351 0.70 +2.3 389,198 - ECD_00351 0.70 -0.3 389,232 + ECD_00351 0.72 +0.2 389,232 + ECD_00351 0.72 +0.3 389,233 - ECD_00351 0.72 -0.3 389,233 - ECD_00351 0.72 -1.2 389,236 + ECD_00351 0.73 -0.3 389,237 - ECD_00351 0.73 +0.0 389,237 - ECD_00351 0.73 -0.9 389,242 + ECD_00351 0.73 +0.4 389,263 + ECD_00351 0.74 -0.1 389,346 + ECD_00351 0.79 -0.0 389,358 - ECD_00351 0.79 +0.5 389,440 + ECD_00351 0.84 +0.1 389,459 + ECD_00351 0.85 -0.4 389,525 + ECD_00351 0.88 -0.8 389,526 - ECD_00351 0.89 -1.0 389,537 - ECD_00351 0.89 +0.9 389,733 - +0.2 389,740 + +2.8 389,945 - ECD_00352 0.35 -0.7 390,099 - ECD_00352 0.62 +0.1 390,172 - ECD_00352 0.74 -0.9 390,172 - ECD_00352 0.74 -0.6 390,172 - ECD_00352 0.74 -0.8 390,191 + ECD_00352 0.78 -1.5 390,191 + ECD_00352 0.78 +1.1 390,192 - ECD_00352 0.78 -0.7 390,192 - ECD_00352 0.78 +0.3 390,192 - ECD_00352 0.78 +1.1 390,259 - ECD_00352 0.89 +0.3 390,294 + +0.4 390,326 - -0.4 390,327 + -0.2 390,327 + +1.1 390,332 + +0.1 390,332 + +0.2 390,484 + -1.3 390,536 - ECD_00353 0.11 -0.5 390,866 + ECD_00353 0.42 -1.1 390,866 + ECD_00353 0.42 -0.2 391,186 - ECD_00353 0.72 -1.3 391,261 + ECD_00353 0.79 +2.2
Or see this region's nucleotide sequence