Experiment: Bas52
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03936 and ECD_03937 are separated by 151 nucleotides
ECD_03936: ECD_03936 - guanine/hypoxanthine permease, high affinity; guanine/hypoxanthine:H+ symporter, at 4,185,889 to 4,187,238
_03936
ECD_03937: ECD_03937 - putative cation/proton antiporter, at 4,187,390 to 4,189,039
_03937
Position (kb)
4187
4188
4189
4190 Strain fitness (log2 ratio)
-2
-1
0
1 at 4186.443 kb on + strand, within ECD_03936 at 4186.443 kb on + strand, within ECD_03936 at 4186.443 kb on + strand, within ECD_03936 at 4186.443 kb on + strand, within ECD_03936 at 4186.444 kb on - strand, within ECD_03936 at 4186.444 kb on - strand, within ECD_03936 at 4186.444 kb on - strand, within ECD_03936 at 4186.455 kb on - strand, within ECD_03936 at 4186.455 kb on - strand, within ECD_03936 at 4186.636 kb on - strand, within ECD_03936 at 4186.655 kb on + strand, within ECD_03936 at 4186.844 kb on + strand, within ECD_03936 at 4186.846 kb on + strand, within ECD_03936 at 4186.846 kb on + strand, within ECD_03936 at 4186.846 kb on + strand, within ECD_03936 at 4186.847 kb on - strand, within ECD_03936 at 4186.847 kb on - strand, within ECD_03936 at 4186.847 kb on - strand, within ECD_03936 at 4186.847 kb on - strand, within ECD_03936 at 4186.882 kb on - strand, within ECD_03936 at 4186.951 kb on + strand, within ECD_03936 at 4186.951 kb on + strand, within ECD_03936 at 4186.966 kb on + strand, within ECD_03936 at 4186.990 kb on + strand, within ECD_03936 at 4186.990 kb on + strand, within ECD_03936 at 4186.990 kb on + strand, within ECD_03936 at 4186.990 kb on + strand, within ECD_03936 at 4186.990 kb on + strand, within ECD_03936 at 4186.990 kb on + strand, within ECD_03936 at 4186.991 kb on - strand, within ECD_03936 at 4186.991 kb on - strand, within ECD_03936 at 4186.991 kb on - strand, within ECD_03936 at 4187.094 kb on + strand, within ECD_03936 at 4187.094 kb on + strand, within ECD_03936 at 4187.095 kb on - strand, within ECD_03936 at 4187.102 kb on + strand, within ECD_03936 at 4187.236 kb on + strand at 4187.236 kb on + strand at 4187.237 kb on - strand at 4187.237 kb on - strand at 4187.410 kb on - strand at 4187.416 kb on - strand at 4187.562 kb on + strand, within ECD_03937 at 4187.698 kb on + strand, within ECD_03937 at 4187.703 kb on - strand, within ECD_03937 at 4187.953 kb on - strand, within ECD_03937 at 4187.996 kb on + strand, within ECD_03937 at 4188.087 kb on - strand, within ECD_03937 at 4188.104 kb on - strand, within ECD_03937 at 4188.258 kb on + strand, within ECD_03937 at 4188.258 kb on + strand, within ECD_03937 at 4188.259 kb on - strand, within ECD_03937 at 4188.316 kb on + strand, within ECD_03937 at 4188.317 kb on - strand, within ECD_03937 at 4188.350 kb on - strand, within ECD_03937 at 4188.358 kb on - strand, within ECD_03937 at 4188.358 kb on - strand, within ECD_03937 at 4188.359 kb on + strand, within ECD_03937 at 4188.359 kb on + strand, within ECD_03937 at 4188.359 kb on + strand, within ECD_03937 at 4188.359 kb on + strand, within ECD_03937 at 4188.360 kb on - strand, within ECD_03937 at 4188.360 kb on - strand, within ECD_03937 at 4188.360 kb on - strand, within ECD_03937 at 4188.360 kb on - strand, within ECD_03937 at 4188.360 kb on - strand, within ECD_03937 at 4188.529 kb on + strand, within ECD_03937 at 4188.553 kb on + strand, within ECD_03937 at 4188.573 kb on - strand, within ECD_03937 at 4188.640 kb on + strand, within ECD_03937 at 4188.641 kb on - strand, within ECD_03937 at 4188.641 kb on - strand, within ECD_03937 at 4188.648 kb on + strand, within ECD_03937 at 4188.649 kb on - strand, within ECD_03937 at 4188.697 kb on + strand, within ECD_03937 at 4188.697 kb on + strand, within ECD_03937 at 4188.787 kb on + strand, within ECD_03937 at 4188.853 kb on + strand, within ECD_03937 at 4188.854 kb on - strand, within ECD_03937 at 4188.938 kb on + strand at 4189.021 kb on - strand at 4189.021 kb on - strand at 4189.142 kb on + strand at 4189.142 kb on + strand at 4189.247 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas52 remove 4,186,443 + ECD_03936 0.41 +0.0 4,186,443 + ECD_03936 0.41 +0.7 4,186,443 + ECD_03936 0.41 -0.2 4,186,443 + ECD_03936 0.41 +0.2 4,186,444 - ECD_03936 0.41 +0.0 4,186,444 - ECD_03936 0.41 -0.3 4,186,444 - ECD_03936 0.41 -0.2 4,186,455 - ECD_03936 0.42 -0.5 4,186,455 - ECD_03936 0.42 +0.2 4,186,636 - ECD_03936 0.55 -0.2 4,186,655 + ECD_03936 0.57 -1.8 4,186,844 + ECD_03936 0.71 -0.3 4,186,846 + ECD_03936 0.71 +0.1 4,186,846 + ECD_03936 0.71 -0.4 4,186,846 + ECD_03936 0.71 -0.6 4,186,847 - ECD_03936 0.71 -1.6 4,186,847 - ECD_03936 0.71 -1.2 4,186,847 - ECD_03936 0.71 +0.5 4,186,847 - ECD_03936 0.71 -0.6 4,186,882 - ECD_03936 0.74 -0.7 4,186,951 + ECD_03936 0.79 +0.6 4,186,951 + ECD_03936 0.79 +1.3 4,186,966 + ECD_03936 0.80 -0.6 4,186,990 + ECD_03936 0.82 +0.3 4,186,990 + ECD_03936 0.82 +0.9 4,186,990 + ECD_03936 0.82 -1.1 4,186,990 + ECD_03936 0.82 +0.0 4,186,990 + ECD_03936 0.82 -0.1 4,186,990 + ECD_03936 0.82 -0.5 4,186,991 - ECD_03936 0.82 +0.4 4,186,991 - ECD_03936 0.82 +0.2 4,186,991 - ECD_03936 0.82 -0.7 4,187,094 + ECD_03936 0.89 +1.3 4,187,094 + ECD_03936 0.89 +0.3 4,187,095 - ECD_03936 0.89 +1.0 4,187,102 + ECD_03936 0.90 -0.1 4,187,236 + -0.3 4,187,236 + +0.6 4,187,237 - -0.0 4,187,237 - +0.0 4,187,410 - -1.2 4,187,416 - +0.5 4,187,562 + ECD_03937 0.10 +1.3 4,187,698 + ECD_03937 0.19 +0.6 4,187,703 - ECD_03937 0.19 +0.6 4,187,953 - ECD_03937 0.34 -1.8 4,187,996 + ECD_03937 0.37 +0.8 4,188,087 - ECD_03937 0.42 +0.3 4,188,104 - ECD_03937 0.43 -0.8 4,188,258 + ECD_03937 0.53 +1.5 4,188,258 + ECD_03937 0.53 -0.4 4,188,259 - ECD_03937 0.53 -0.5 4,188,316 + ECD_03937 0.56 +0.7 4,188,317 - ECD_03937 0.56 -1.2 4,188,350 - ECD_03937 0.58 -0.3 4,188,358 - ECD_03937 0.59 -0.5 4,188,358 - ECD_03937 0.59 +0.3 4,188,359 + ECD_03937 0.59 +0.3 4,188,359 + ECD_03937 0.59 -0.8 4,188,359 + ECD_03937 0.59 -1.2 4,188,359 + ECD_03937 0.59 -0.2 4,188,360 - ECD_03937 0.59 -0.4 4,188,360 - ECD_03937 0.59 -0.7 4,188,360 - ECD_03937 0.59 -0.5 4,188,360 - ECD_03937 0.59 +0.5 4,188,360 - ECD_03937 0.59 -0.3 4,188,529 + ECD_03937 0.69 -0.5 4,188,553 + ECD_03937 0.70 +0.7 4,188,573 - ECD_03937 0.72 +0.0 4,188,640 + ECD_03937 0.76 -0.6 4,188,641 - ECD_03937 0.76 +0.2 4,188,641 - ECD_03937 0.76 +0.4 4,188,648 + ECD_03937 0.76 +0.0 4,188,649 - ECD_03937 0.76 -0.6 4,188,697 + ECD_03937 0.79 -0.8 4,188,697 + ECD_03937 0.79 -0.1 4,188,787 + ECD_03937 0.85 +0.4 4,188,853 + ECD_03937 0.89 -0.2 4,188,854 - ECD_03937 0.89 +0.4 4,188,938 + -0.1 4,189,021 - +1.0 4,189,021 - -0.2 4,189,142 + +0.4 4,189,142 + +1.0 4,189,247 - +0.5
Or see this region's nucleotide sequence