Strain Fitness in Escherichia coli BL21 around ECD_03690

Experiment: Bas52

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03689 and ECD_03690 are separated by 54 nucleotidesECD_03690 and ECD_03691 are separated by 82 nucleotides ECD_03689: ECD_03689 - DNA-dependent ATPase I and helicase II, at 3,888,260 to 3,890,422 _03689 ECD_03690: ECD_03690 - hypothetical protein, at 3,890,477 to 3,891,379 _03690 ECD_03691: ECD_03691 - DUF2233 family protein, at 3,891,462 to 3,892,226 _03691 Position (kb) 3890 3891 3892Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3890.233 kb on + strandat 3890.268 kb on - strandat 3890.345 kb on - strandat 3890.400 kb on - strandat 3890.420 kb on + strandat 3890.420 kb on + strandat 3890.420 kb on + strandat 3890.421 kb on - strandat 3890.478 kb on + strandat 3890.478 kb on + strandat 3890.478 kb on + strandat 3890.479 kb on - strandat 3890.479 kb on - strandat 3890.479 kb on - strandat 3890.479 kb on - strandat 3890.512 kb on + strandat 3890.579 kb on + strand, within ECD_03690at 3890.579 kb on + strand, within ECD_03690at 3890.580 kb on - strand, within ECD_03690at 3890.580 kb on - strand, within ECD_03690at 3890.592 kb on + strand, within ECD_03690at 3890.592 kb on + strand, within ECD_03690at 3890.592 kb on + strand, within ECD_03690at 3890.593 kb on - strand, within ECD_03690at 3890.638 kb on - strand, within ECD_03690at 3890.684 kb on + strand, within ECD_03690at 3890.907 kb on + strand, within ECD_03690at 3890.907 kb on + strand, within ECD_03690at 3890.908 kb on - strand, within ECD_03690at 3890.908 kb on - strand, within ECD_03690at 3890.913 kb on + strand, within ECD_03690at 3890.913 kb on + strand, within ECD_03690at 3890.914 kb on - strand, within ECD_03690at 3890.914 kb on - strand, within ECD_03690at 3890.914 kb on - strand, within ECD_03690at 3890.914 kb on - strand, within ECD_03690at 3890.914 kb on - strand, within ECD_03690at 3890.915 kb on + strand, within ECD_03690at 3890.915 kb on + strand, within ECD_03690at 3890.916 kb on - strand, within ECD_03690at 3890.916 kb on - strand, within ECD_03690at 3890.916 kb on - strand, within ECD_03690at 3890.916 kb on - strand, within ECD_03690at 3890.916 kb on - strand, within ECD_03690at 3890.916 kb on - strand, within ECD_03690at 3890.916 kb on - strand, within ECD_03690at 3890.916 kb on - strand, within ECD_03690at 3890.916 kb on - strand, within ECD_03690at 3890.935 kb on + strand, within ECD_03690at 3890.936 kb on - strand, within ECD_03690at 3890.936 kb on - strand, within ECD_03690at 3890.937 kb on + strand, within ECD_03690at 3891.052 kb on - strand, within ECD_03690at 3891.190 kb on - strand, within ECD_03690at 3891.190 kb on - strand, within ECD_03690at 3891.398 kb on - strandat 3891.455 kb on - strandat 3891.463 kb on + strandat 3891.463 kb on + strandat 3891.533 kb on + strandat 3891.534 kb on - strandat 3891.535 kb on + strandat 3891.535 kb on + strandat 3891.535 kb on + strandat 3891.535 kb on + strandat 3891.535 kb on + strandat 3891.535 kb on + strandat 3891.536 kb on - strandat 3891.536 kb on - strandat 3891.536 kb on - strandat 3891.536 kb on - strandat 3891.536 kb on - strandat 3891.539 kb on + strand, within ECD_03691at 3891.539 kb on + strand, within ECD_03691at 3891.539 kb on + strand, within ECD_03691at 3891.539 kb on + strand, within ECD_03691at 3891.539 kb on + strand, within ECD_03691at 3891.539 kb on + strand, within ECD_03691at 3891.539 kb on + strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.540 kb on - strand, within ECD_03691at 3891.563 kb on - strand, within ECD_03691at 3891.599 kb on - strand, within ECD_03691at 3891.663 kb on - strand, within ECD_03691at 3891.714 kb on - strand, within ECD_03691at 3891.727 kb on - strand, within ECD_03691at 3891.832 kb on + strand, within ECD_03691at 3891.832 kb on + strand, within ECD_03691at 3891.833 kb on - strand, within ECD_03691at 3891.833 kb on - strand, within ECD_03691at 3891.833 kb on - strand, within ECD_03691at 3891.833 kb on - strand, within ECD_03691at 3891.917 kb on - strand, within ECD_03691at 3891.934 kb on + strand, within ECD_03691at 3891.934 kb on + strand, within ECD_03691at 3891.935 kb on - strand, within ECD_03691at 3891.946 kb on + strand, within ECD_03691at 3891.946 kb on + strand, within ECD_03691at 3891.946 kb on + strand, within ECD_03691at 3891.947 kb on - strand, within ECD_03691at 3891.947 kb on - strand, within ECD_03691at 3891.986 kb on + strand, within ECD_03691at 3892.012 kb on - strand, within ECD_03691at 3892.048 kb on + strand, within ECD_03691at 3892.049 kb on - strand, within ECD_03691at 3892.049 kb on - strand, within ECD_03691at 3892.082 kb on + strand, within ECD_03691at 3892.083 kb on - strand, within ECD_03691at 3892.083 kb on - strand, within ECD_03691at 3892.084 kb on + strand, within ECD_03691at 3892.084 kb on + strand, within ECD_03691at 3892.084 kb on + strand, within ECD_03691at 3892.085 kb on - strand, within ECD_03691at 3892.085 kb on - strand, within ECD_03691at 3892.152 kb on + strandat 3892.227 kb on + strandat 3892.229 kb on + strandat 3892.229 kb on + strandat 3892.229 kb on + strandat 3892.229 kb on + strandat 3892.229 kb on + strandat 3892.229 kb on + strandat 3892.230 kb on - strandat 3892.300 kb on + strandat 3892.301 kb on - strandat 3892.350 kb on + strandat 3892.350 kb on + strandat 3892.372 kb on + strandat 3892.372 kb on + strandat 3892.372 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas52
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3,890,233 + -1.9
3,890,268 - -1.9
3,890,345 - -3.4
3,890,400 - -0.7
3,890,420 + -0.2
3,890,420 + -0.1
3,890,420 + +0.1
3,890,421 - -0.1
3,890,478 + -0.9
3,890,478 + -0.2
3,890,478 + -0.4
3,890,479 - +1.1
3,890,479 - -0.3
3,890,479 - -0.6
3,890,479 - +0.3
3,890,512 + +0.0
3,890,579 + ECD_03690 0.11 +0.5
3,890,579 + ECD_03690 0.11 +0.2
3,890,580 - ECD_03690 0.11 +0.1
3,890,580 - ECD_03690 0.11 -1.1
3,890,592 + ECD_03690 0.13 +0.0
3,890,592 + ECD_03690 0.13 +0.3
3,890,592 + ECD_03690 0.13 +0.0
3,890,593 - ECD_03690 0.13 -0.1
3,890,638 - ECD_03690 0.18 -0.6
3,890,684 + ECD_03690 0.23 +0.9
3,890,907 + ECD_03690 0.48 +0.3
3,890,907 + ECD_03690 0.48 -0.5
3,890,908 - ECD_03690 0.48 +0.2
3,890,908 - ECD_03690 0.48 -2.7
3,890,913 + ECD_03690 0.48 +1.1
3,890,913 + ECD_03690 0.48 -0.1
3,890,914 - ECD_03690 0.48 -0.1
3,890,914 - ECD_03690 0.48 -1.2
3,890,914 - ECD_03690 0.48 -0.7
3,890,914 - ECD_03690 0.48 +0.7
3,890,914 - ECD_03690 0.48 -0.1
3,890,915 + ECD_03690 0.49 +0.1
3,890,915 + ECD_03690 0.49 -0.4
3,890,916 - ECD_03690 0.49 -0.4
3,890,916 - ECD_03690 0.49 -1.1
3,890,916 - ECD_03690 0.49 -0.9
3,890,916 - ECD_03690 0.49 +0.1
3,890,916 - ECD_03690 0.49 +0.2
3,890,916 - ECD_03690 0.49 -0.7
3,890,916 - ECD_03690 0.49 -0.3
3,890,916 - ECD_03690 0.49 -0.4
3,890,916 - ECD_03690 0.49 +1.2
3,890,935 + ECD_03690 0.51 +0.6
3,890,936 - ECD_03690 0.51 -0.4
3,890,936 - ECD_03690 0.51 -2.1
3,890,937 + ECD_03690 0.51 -0.2
3,891,052 - ECD_03690 0.64 -0.4
3,891,190 - ECD_03690 0.79 -0.1
3,891,190 - ECD_03690 0.79 -0.2
3,891,398 - -0.5
3,891,455 - -0.3
3,891,463 + -0.2
3,891,463 + +0.8
3,891,533 + +0.1
3,891,534 - +0.8
3,891,535 + -0.7
3,891,535 + -0.5
3,891,535 + -0.9
3,891,535 + +0.6
3,891,535 + +0.0
3,891,535 + -1.7
3,891,536 - -0.3
3,891,536 - -0.5
3,891,536 - +0.6
3,891,536 - -0.5
3,891,536 - -1.1
3,891,539 + ECD_03691 0.10 +0.9
3,891,539 + ECD_03691 0.10 -0.1
3,891,539 + ECD_03691 0.10 +0.1
3,891,539 + ECD_03691 0.10 -0.3
3,891,539 + ECD_03691 0.10 +0.0
3,891,539 + ECD_03691 0.10 +0.8
3,891,539 + ECD_03691 0.10 +0.6
3,891,540 - ECD_03691 0.10 -0.8
3,891,540 - ECD_03691 0.10 -1.9
3,891,540 - ECD_03691 0.10 -0.9
3,891,540 - ECD_03691 0.10 +0.4
3,891,540 - ECD_03691 0.10 -0.5
3,891,540 - ECD_03691 0.10 +1.9
3,891,540 - ECD_03691 0.10 +0.5
3,891,540 - ECD_03691 0.10 +0.7
3,891,540 - ECD_03691 0.10 -1.6
3,891,540 - ECD_03691 0.10 -1.1
3,891,540 - ECD_03691 0.10 -0.1
3,891,540 - ECD_03691 0.10 +0.8
3,891,540 - ECD_03691 0.10 +0.3
3,891,563 - ECD_03691 0.13 -0.6
3,891,599 - ECD_03691 0.18 -0.6
3,891,663 - ECD_03691 0.26 -0.1
3,891,714 - ECD_03691 0.33 -0.0
3,891,727 - ECD_03691 0.35 -1.0
3,891,832 + ECD_03691 0.48 +1.0
3,891,832 + ECD_03691 0.48 -0.6
3,891,833 - ECD_03691 0.48 +0.3
3,891,833 - ECD_03691 0.48 -1.8
3,891,833 - ECD_03691 0.48 +0.5
3,891,833 - ECD_03691 0.48 -1.6
3,891,917 - ECD_03691 0.59 +0.5
3,891,934 + ECD_03691 0.62 -0.1
3,891,934 + ECD_03691 0.62 +0.7
3,891,935 - ECD_03691 0.62 +0.1
3,891,946 + ECD_03691 0.63 -1.7
3,891,946 + ECD_03691 0.63 -2.0
3,891,946 + ECD_03691 0.63 +0.3
3,891,947 - ECD_03691 0.63 -1.5
3,891,947 - ECD_03691 0.63 -0.8
3,891,986 + ECD_03691 0.68 -0.5
3,892,012 - ECD_03691 0.72 -0.8
3,892,048 + ECD_03691 0.77 -0.5
3,892,049 - ECD_03691 0.77 -0.6
3,892,049 - ECD_03691 0.77 -1.1
3,892,082 + ECD_03691 0.81 +0.5
3,892,083 - ECD_03691 0.81 -0.5
3,892,083 - ECD_03691 0.81 -0.5
3,892,084 + ECD_03691 0.81 +0.9
3,892,084 + ECD_03691 0.81 -0.1
3,892,084 + ECD_03691 0.81 -0.5
3,892,085 - ECD_03691 0.81 -1.3
3,892,085 - ECD_03691 0.81 -0.9
3,892,152 + -1.9
3,892,227 + +1.2
3,892,229 + -0.2
3,892,229 + -0.3
3,892,229 + -0.3
3,892,229 + -0.1
3,892,229 + +0.2
3,892,229 + +0.1
3,892,230 - -0.0
3,892,300 + -0.0
3,892,301 - -0.3
3,892,350 + +3.1
3,892,350 + +3.1
3,892,372 + +0.1
3,892,372 + +1.3
3,892,372 + +1.5

Or see this region's nucleotide sequence