Experiment: Bas52
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03509 and ECD_03510 overlap by 16 nucleotides ECD_03510 and ECD_03511 are separated by 74 nucleotides
ECD_03509: ECD_03509 - ATP-dependent DNA helicase, at 3,692,002 to 3,694,083
_03509
ECD_03510: ECD_03510 - hypothetical protein, at 3,694,068 to 3,694,862
_03510
ECD_03511: ECD_03511 - glutamate transporter, at 3,694,937 to 3,696,142
_03511
Position (kb)
3694
3695 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3693.073 kb on - strand, within ECD_03509 at 3693.320 kb on - strand, within ECD_03509 at 3693.344 kb on + strand, within ECD_03509 at 3693.460 kb on + strand, within ECD_03509 at 3693.461 kb on - strand, within ECD_03509 at 3693.471 kb on + strand, within ECD_03509 at 3693.472 kb on - strand, within ECD_03509 at 3693.472 kb on - strand, within ECD_03509 at 3693.472 kb on - strand, within ECD_03509 at 3693.632 kb on + strand, within ECD_03509 at 3693.699 kb on + strand, within ECD_03509 at 3693.755 kb on + strand, within ECD_03509 at 3693.756 kb on - strand, within ECD_03509 at 3693.882 kb on - strand at 3693.908 kb on + strand at 3694.003 kb on - strand at 3694.040 kb on + strand at 3694.069 kb on + strand at 3694.070 kb on - strand at 3694.153 kb on + strand, within ECD_03510 at 3694.154 kb on - strand, within ECD_03510 at 3694.305 kb on + strand, within ECD_03510 at 3694.356 kb on + strand, within ECD_03510 at 3694.368 kb on + strand, within ECD_03510 at 3694.369 kb on - strand, within ECD_03510 at 3694.369 kb on - strand, within ECD_03510 at 3694.382 kb on - strand, within ECD_03510 at 3694.473 kb on - strand, within ECD_03510 at 3694.473 kb on - strand, within ECD_03510 at 3694.526 kb on + strand, within ECD_03510 at 3694.526 kb on + strand, within ECD_03510 at 3694.603 kb on + strand, within ECD_03510 at 3694.662 kb on + strand, within ECD_03510 at 3694.719 kb on + strand, within ECD_03510 at 3694.720 kb on - strand, within ECD_03510 at 3694.720 kb on - strand, within ECD_03510 at 3694.720 kb on - strand, within ECD_03510 at 3694.737 kb on - strand, within ECD_03510 at 3694.752 kb on + strand, within ECD_03510 at 3694.752 kb on + strand, within ECD_03510 at 3694.753 kb on - strand, within ECD_03510 at 3694.756 kb on + strand, within ECD_03510 at 3694.756 kb on + strand, within ECD_03510 at 3694.756 kb on + strand, within ECD_03510 at 3694.756 kb on + strand, within ECD_03510 at 3694.756 kb on + strand, within ECD_03510 at 3694.757 kb on - strand, within ECD_03510 at 3694.757 kb on - strand, within ECD_03510 at 3694.757 kb on - strand, within ECD_03510 at 3694.757 kb on - strand, within ECD_03510 at 3694.757 kb on - strand, within ECD_03510 at 3694.757 kb on - strand, within ECD_03510 at 3694.757 kb on - strand, within ECD_03510 at 3694.757 kb on - strand, within ECD_03510 at 3694.757 kb on - strand, within ECD_03510 at 3694.759 kb on + strand, within ECD_03510 at 3694.760 kb on - strand, within ECD_03510 at 3694.760 kb on - strand, within ECD_03510 at 3694.902 kb on + strand at 3694.965 kb on + strand at 3694.966 kb on - strand at 3694.972 kb on + strand at 3694.973 kb on - strand at 3694.973 kb on - strand at 3694.973 kb on - strand at 3695.000 kb on - strand at 3695.184 kb on + strand, within ECD_03511 at 3695.185 kb on - strand, within ECD_03511 at 3695.185 kb on - strand, within ECD_03511 at 3695.185 kb on - strand, within ECD_03511 at 3695.300 kb on + strand, within ECD_03511 at 3695.300 kb on + strand, within ECD_03511 at 3695.300 kb on + strand, within ECD_03511 at 3695.468 kb on - strand, within ECD_03511 at 3695.566 kb on + strand, within ECD_03511 at 3695.599 kb on - strand, within ECD_03511 at 3695.708 kb on - strand, within ECD_03511 at 3695.749 kb on + strand, within ECD_03511 at 3695.750 kb on - strand, within ECD_03511 at 3695.750 kb on - strand, within ECD_03511 at 3695.794 kb on + strand, within ECD_03511 at 3695.795 kb on - strand, within ECD_03511 at 3695.800 kb on + strand, within ECD_03511
Per-strain Table
Position Strand Gene LocusTag Fraction Bas52 remove 3,693,073 - ECD_03509 0.51 -1.3 3,693,320 - ECD_03509 0.63 -0.0 3,693,344 + ECD_03509 0.64 -1.3 3,693,460 + ECD_03509 0.70 +0.4 3,693,461 - ECD_03509 0.70 -0.8 3,693,471 + ECD_03509 0.71 -0.5 3,693,472 - ECD_03509 0.71 -1.2 3,693,472 - ECD_03509 0.71 -0.6 3,693,472 - ECD_03509 0.71 +0.8 3,693,632 + ECD_03509 0.78 -0.4 3,693,699 + ECD_03509 0.82 -1.2 3,693,755 + ECD_03509 0.84 -0.8 3,693,756 - ECD_03509 0.84 -1.2 3,693,882 - -1.4 3,693,908 + +0.3 3,694,003 - +1.8 3,694,040 + -0.0 3,694,069 + +0.5 3,694,070 - -0.3 3,694,153 + ECD_03510 0.11 +0.2 3,694,154 - ECD_03510 0.11 +1.1 3,694,305 + ECD_03510 0.30 -0.5 3,694,356 + ECD_03510 0.36 +1.4 3,694,368 + ECD_03510 0.38 -1.0 3,694,369 - ECD_03510 0.38 -0.2 3,694,369 - ECD_03510 0.38 -0.4 3,694,382 - ECD_03510 0.39 +1.1 3,694,473 - ECD_03510 0.51 +0.3 3,694,473 - ECD_03510 0.51 -0.3 3,694,526 + ECD_03510 0.58 +0.0 3,694,526 + ECD_03510 0.58 +1.7 3,694,603 + ECD_03510 0.67 -0.7 3,694,662 + ECD_03510 0.75 +0.0 3,694,719 + ECD_03510 0.82 +0.8 3,694,720 - ECD_03510 0.82 +0.8 3,694,720 - ECD_03510 0.82 -0.6 3,694,720 - ECD_03510 0.82 -0.1 3,694,737 - ECD_03510 0.84 -0.8 3,694,752 + ECD_03510 0.86 +0.4 3,694,752 + ECD_03510 0.86 +0.2 3,694,753 - ECD_03510 0.86 +0.3 3,694,756 + ECD_03510 0.87 +0.2 3,694,756 + ECD_03510 0.87 -0.6 3,694,756 + ECD_03510 0.87 +0.9 3,694,756 + ECD_03510 0.87 +0.2 3,694,756 + ECD_03510 0.87 -1.2 3,694,757 - ECD_03510 0.87 -0.6 3,694,757 - ECD_03510 0.87 -0.3 3,694,757 - ECD_03510 0.87 -2.0 3,694,757 - ECD_03510 0.87 +0.5 3,694,757 - ECD_03510 0.87 +0.6 3,694,757 - ECD_03510 0.87 -0.8 3,694,757 - ECD_03510 0.87 -0.0 3,694,757 - ECD_03510 0.87 +0.1 3,694,757 - ECD_03510 0.87 +1.1 3,694,759 + ECD_03510 0.87 +0.2 3,694,760 - ECD_03510 0.87 +0.6 3,694,760 - ECD_03510 0.87 +0.6 3,694,902 + -0.3 3,694,965 + -1.8 3,694,966 - +1.7 3,694,972 + +0.3 3,694,973 - +1.3 3,694,973 - +1.2 3,694,973 - +0.6 3,695,000 - +0.9 3,695,184 + ECD_03511 0.20 +1.4 3,695,185 - ECD_03511 0.21 +1.5 3,695,185 - ECD_03511 0.21 +1.2 3,695,185 - ECD_03511 0.21 +0.8 3,695,300 + ECD_03511 0.30 +3.5 3,695,300 + ECD_03511 0.30 +0.2 3,695,300 + ECD_03511 0.30 +1.7 3,695,468 - ECD_03511 0.44 +0.0 3,695,566 + ECD_03511 0.52 +1.8 3,695,599 - ECD_03511 0.55 +1.1 3,695,708 - ECD_03511 0.64 +1.5 3,695,749 + ECD_03511 0.67 +1.8 3,695,750 - ECD_03511 0.67 +0.7 3,695,750 - ECD_03511 0.67 +0.9 3,695,794 + ECD_03511 0.71 +0.9 3,695,795 - ECD_03511 0.71 +0.8 3,695,800 + ECD_03511 0.72 +1.9
Or see this region's nucleotide sequence