Experiment: Bas52
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02922 and ECD_02923 are separated by 47 nucleotides ECD_02923 and ECD_02924 are separated by 22 nucleotides
ECD_02922: ECD_02922 - heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase, at 3,061,419 to 3,062,852
_02922
ECD_02923: ECD_02923 - fused deadenylyltransferase/adenylyltransferase for glutamine synthetase, at 3,062,900 to 3,065,740
_02923
ECD_02924: ECD_02924 - inorganic triphosphatase, at 3,065,763 to 3,067,064
_02924
Position (kb)
3062
3063
3064
3065
3066 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3062.892 kb on - strand at 3062.896 kb on + strand at 3062.897 kb on - strand at 3062.897 kb on - strand at 3062.897 kb on - strand at 3063.030 kb on + strand at 3063.030 kb on + strand at 3063.031 kb on - strand at 3063.031 kb on - strand at 3063.031 kb on - strand at 3063.031 kb on - strand at 3063.068 kb on - strand at 3063.086 kb on + strand at 3063.086 kb on + strand at 3063.098 kb on - strand at 3063.160 kb on - strand at 3063.185 kb on - strand, within ECD_02923 at 3063.290 kb on - strand, within ECD_02923 at 3063.310 kb on + strand, within ECD_02923 at 3063.311 kb on - strand, within ECD_02923 at 3063.365 kb on + strand, within ECD_02923 at 3063.365 kb on + strand, within ECD_02923 at 3063.365 kb on + strand, within ECD_02923 at 3063.365 kb on + strand, within ECD_02923 at 3063.366 kb on - strand, within ECD_02923 at 3063.366 kb on - strand, within ECD_02923 at 3063.496 kb on - strand, within ECD_02923 at 3063.536 kb on - strand, within ECD_02923 at 3063.536 kb on - strand, within ECD_02923 at 3063.536 kb on - strand, within ECD_02923 at 3063.559 kb on - strand, within ECD_02923 at 3063.628 kb on + strand, within ECD_02923 at 3063.629 kb on - strand, within ECD_02923 at 3063.629 kb on - strand, within ECD_02923 at 3063.629 kb on - strand, within ECD_02923 at 3063.629 kb on - strand, within ECD_02923 at 3063.629 kb on - strand, within ECD_02923 at 3063.653 kb on + strand, within ECD_02923 at 3063.779 kb on + strand, within ECD_02923 at 3063.779 kb on + strand, within ECD_02923 at 3063.780 kb on - strand, within ECD_02923 at 3063.780 kb on - strand, within ECD_02923 at 3063.780 kb on - strand, within ECD_02923 at 3063.780 kb on - strand, within ECD_02923 at 3063.780 kb on - strand, within ECD_02923 at 3063.780 kb on - strand, within ECD_02923 at 3063.804 kb on - strand, within ECD_02923 at 3063.830 kb on + strand, within ECD_02923 at 3063.961 kb on - strand, within ECD_02923 at 3064.085 kb on - strand, within ECD_02923 at 3064.115 kb on + strand, within ECD_02923 at 3064.116 kb on - strand, within ECD_02923 at 3064.119 kb on + strand, within ECD_02923 at 3064.119 kb on + strand, within ECD_02923 at 3064.119 kb on + strand, within ECD_02923 at 3064.265 kb on - strand, within ECD_02923 at 3064.444 kb on + strand, within ECD_02923 at 3064.468 kb on + strand, within ECD_02923 at 3064.468 kb on + strand, within ECD_02923 at 3064.468 kb on + strand, within ECD_02923 at 3064.469 kb on - strand, within ECD_02923 at 3064.469 kb on - strand, within ECD_02923 at 3064.469 kb on - strand, within ECD_02923 at 3064.469 kb on - strand, within ECD_02923 at 3064.469 kb on - strand, within ECD_02923 at 3064.469 kb on - strand, within ECD_02923 at 3064.540 kb on + strand, within ECD_02923 at 3064.541 kb on - strand, within ECD_02923 at 3064.541 kb on - strand, within ECD_02923 at 3064.541 kb on - strand, within ECD_02923 at 3064.620 kb on + strand, within ECD_02923 at 3064.621 kb on - strand, within ECD_02923 at 3064.621 kb on - strand, within ECD_02923 at 3064.695 kb on - strand, within ECD_02923 at 3064.695 kb on - strand, within ECD_02923 at 3064.756 kb on + strand, within ECD_02923 at 3064.881 kb on + strand, within ECD_02923 at 3064.881 kb on + strand, within ECD_02923 at 3064.882 kb on - strand, within ECD_02923 at 3064.882 kb on - strand, within ECD_02923 at 3064.929 kb on + strand, within ECD_02923 at 3064.930 kb on - strand, within ECD_02923 at 3064.930 kb on - strand, within ECD_02923 at 3064.930 kb on - strand, within ECD_02923 at 3064.930 kb on - strand, within ECD_02923 at 3064.930 kb on - strand, within ECD_02923 at 3064.930 kb on - strand, within ECD_02923 at 3064.930 kb on - strand, within ECD_02923 at 3064.952 kb on - strand, within ECD_02923 at 3065.005 kb on - strand, within ECD_02923 at 3065.008 kb on - strand, within ECD_02923 at 3065.120 kb on - strand, within ECD_02923 at 3065.185 kb on + strand, within ECD_02923 at 3065.186 kb on - strand, within ECD_02923 at 3065.397 kb on - strand, within ECD_02923 at 3065.450 kb on - strand, within ECD_02923 at 3065.465 kb on + strand at 3065.507 kb on - strand at 3065.507 kb on - strand at 3065.507 kb on - strand at 3065.507 kb on - strand at 3065.507 kb on - strand at 3065.632 kb on + strand at 3065.636 kb on + strand at 3065.741 kb on - strand at 3065.741 kb on - strand at 3065.750 kb on + strand at 3065.853 kb on - strand at 3065.908 kb on + strand, within ECD_02924 at 3065.908 kb on + strand, within ECD_02924 at 3065.909 kb on - strand, within ECD_02924 at 3065.909 kb on - strand, within ECD_02924 at 3065.909 kb on - strand, within ECD_02924 at 3065.909 kb on - strand, within ECD_02924 at 3065.909 kb on - strand, within ECD_02924 at 3065.909 kb on - strand, within ECD_02924 at 3065.909 kb on - strand, within ECD_02924 at 3065.909 kb on - strand, within ECD_02924 at 3065.940 kb on - strand, within ECD_02924 at 3066.087 kb on + strand, within ECD_02924 at 3066.111 kb on + strand, within ECD_02924 at 3066.111 kb on + strand, within ECD_02924 at 3066.161 kb on - strand, within ECD_02924 at 3066.225 kb on + strand, within ECD_02924 at 3066.226 kb on - strand, within ECD_02924 at 3066.276 kb on - strand, within ECD_02924 at 3066.276 kb on - strand, within ECD_02924 at 3066.353 kb on - strand, within ECD_02924
Per-strain Table
Position Strand Gene LocusTag Fraction Bas52 remove 3,062,892 - -0.5 3,062,896 + -0.7 3,062,897 - -2.4 3,062,897 - +2.2 3,062,897 - -0.7 3,063,030 + -1.0 3,063,030 + +0.4 3,063,031 - +2.2 3,063,031 - -0.8 3,063,031 - -1.0 3,063,031 - -0.6 3,063,068 - -1.0 3,063,086 + -0.5 3,063,086 + -2.3 3,063,098 - +0.0 3,063,160 - +0.0 3,063,185 - ECD_02923 0.10 -2.3 3,063,290 - ECD_02923 0.14 +1.0 3,063,310 + ECD_02923 0.14 -2.7 3,063,311 - ECD_02923 0.14 +2.3 3,063,365 + ECD_02923 0.16 -2.2 3,063,365 + ECD_02923 0.16 +4.5 3,063,365 + ECD_02923 0.16 -1.5 3,063,365 + ECD_02923 0.16 -1.5 3,063,366 - ECD_02923 0.16 -2.1 3,063,366 - ECD_02923 0.16 -0.3 3,063,496 - ECD_02923 0.21 -1.9 3,063,536 - ECD_02923 0.22 -1.0 3,063,536 - ECD_02923 0.22 -0.6 3,063,536 - ECD_02923 0.22 -2.8 3,063,559 - ECD_02923 0.23 -3.0 3,063,628 + ECD_02923 0.26 -2.5 3,063,629 - ECD_02923 0.26 -1.7 3,063,629 - ECD_02923 0.26 -1.1 3,063,629 - ECD_02923 0.26 -0.5 3,063,629 - ECD_02923 0.26 -1.6 3,063,629 - ECD_02923 0.26 -1.1 3,063,653 + ECD_02923 0.27 -0.5 3,063,779 + ECD_02923 0.31 -1.9 3,063,779 + ECD_02923 0.31 -0.6 3,063,780 - ECD_02923 0.31 -2.0 3,063,780 - ECD_02923 0.31 -0.7 3,063,780 - ECD_02923 0.31 -1.8 3,063,780 - ECD_02923 0.31 -1.8 3,063,780 - ECD_02923 0.31 -1.6 3,063,780 - ECD_02923 0.31 -1.3 3,063,804 - ECD_02923 0.32 -1.7 3,063,830 + ECD_02923 0.33 +1.3 3,063,961 - ECD_02923 0.37 +0.0 3,064,085 - ECD_02923 0.42 -1.0 3,064,115 + ECD_02923 0.43 +2.0 3,064,116 - ECD_02923 0.43 +0.5 3,064,119 + ECD_02923 0.43 -0.3 3,064,119 + ECD_02923 0.43 -1.0 3,064,119 + ECD_02923 0.43 -1.2 3,064,265 - ECD_02923 0.48 -0.4 3,064,444 + ECD_02923 0.54 +0.5 3,064,468 + ECD_02923 0.55 -2.0 3,064,468 + ECD_02923 0.55 -0.5 3,064,468 + ECD_02923 0.55 -1.0 3,064,469 - ECD_02923 0.55 +3.2 3,064,469 - ECD_02923 0.55 +0.5 3,064,469 - ECD_02923 0.55 -0.9 3,064,469 - ECD_02923 0.55 -0.6 3,064,469 - ECD_02923 0.55 -1.7 3,064,469 - ECD_02923 0.55 -1.4 3,064,540 + ECD_02923 0.58 -2.5 3,064,541 - ECD_02923 0.58 -0.9 3,064,541 - ECD_02923 0.58 -2.0 3,064,541 - ECD_02923 0.58 -2.1 3,064,620 + ECD_02923 0.61 +0.7 3,064,621 - ECD_02923 0.61 +0.4 3,064,621 - ECD_02923 0.61 -1.1 3,064,695 - ECD_02923 0.63 -0.7 3,064,695 - ECD_02923 0.63 -0.7 3,064,756 + ECD_02923 0.65 -2.4 3,064,881 + ECD_02923 0.70 -1.4 3,064,881 + ECD_02923 0.70 -1.4 3,064,882 - ECD_02923 0.70 +0.6 3,064,882 - ECD_02923 0.70 -0.7 3,064,929 + ECD_02923 0.71 -0.5 3,064,930 - ECD_02923 0.71 -1.2 3,064,930 - ECD_02923 0.71 -1.6 3,064,930 - ECD_02923 0.71 +3.3 3,064,930 - ECD_02923 0.71 +2.7 3,064,930 - ECD_02923 0.71 -0.3 3,064,930 - ECD_02923 0.71 -2.3 3,064,930 - ECD_02923 0.71 -2.0 3,064,952 - ECD_02923 0.72 -0.5 3,065,005 - ECD_02923 0.74 +0.7 3,065,008 - ECD_02923 0.74 -1.7 3,065,120 - ECD_02923 0.78 +2.3 3,065,185 + ECD_02923 0.80 -2.5 3,065,186 - ECD_02923 0.80 -3.0 3,065,397 - ECD_02923 0.88 -1.3 3,065,450 - ECD_02923 0.90 -1.1 3,065,465 + -0.5 3,065,507 - -0.6 3,065,507 - -1.5 3,065,507 - -1.9 3,065,507 - +2.7 3,065,507 - -1.7 3,065,632 + -1.3 3,065,636 + -0.1 3,065,741 - -3.4 3,065,741 - -1.1 3,065,750 + -0.4 3,065,853 - -1.8 3,065,908 + ECD_02924 0.11 -2.0 3,065,908 + ECD_02924 0.11 +4.3 3,065,909 - ECD_02924 0.11 +0.7 3,065,909 - ECD_02924 0.11 -0.5 3,065,909 - ECD_02924 0.11 -0.4 3,065,909 - ECD_02924 0.11 +3.2 3,065,909 - ECD_02924 0.11 +2.2 3,065,909 - ECD_02924 0.11 -0.0 3,065,909 - ECD_02924 0.11 -2.0 3,065,909 - ECD_02924 0.11 -0.1 3,065,940 - ECD_02924 0.14 -0.1 3,066,087 + ECD_02924 0.25 +1.6 3,066,111 + ECD_02924 0.27 -0.3 3,066,111 + ECD_02924 0.27 -1.8 3,066,161 - ECD_02924 0.31 -0.3 3,066,225 + ECD_02924 0.35 +1.6 3,066,226 - ECD_02924 0.36 -0.4 3,066,276 - ECD_02924 0.39 -1.0 3,066,276 - ECD_02924 0.39 +1.8 3,066,353 - ECD_02924 0.45 +2.0
Or see this region's nucleotide sequence