Strain Fitness in Escherichia coli BL21 around ECD_02923

Experiment: Bas52

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02922 and ECD_02923 are separated by 47 nucleotidesECD_02923 and ECD_02924 are separated by 22 nucleotides ECD_02922: ECD_02922 - heptose 7-phosphate kinase and heptose 1-phosphate adenyltransferase, at 3,061,419 to 3,062,852 _02922 ECD_02923: ECD_02923 - fused deadenylyltransferase/adenylyltransferase for glutamine synthetase, at 3,062,900 to 3,065,740 _02923 ECD_02924: ECD_02924 - inorganic triphosphatase, at 3,065,763 to 3,067,064 _02924 Position (kb) 3062 3063 3064 3065 3066Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 3062.892 kb on - strandat 3062.896 kb on + strandat 3062.897 kb on - strandat 3062.897 kb on - strandat 3062.897 kb on - strandat 3063.030 kb on + strandat 3063.030 kb on + strandat 3063.031 kb on - strandat 3063.031 kb on - strandat 3063.031 kb on - strandat 3063.031 kb on - strandat 3063.068 kb on - strandat 3063.086 kb on + strandat 3063.086 kb on + strandat 3063.098 kb on - strandat 3063.160 kb on - strandat 3063.185 kb on - strand, within ECD_02923at 3063.290 kb on - strand, within ECD_02923at 3063.310 kb on + strand, within ECD_02923at 3063.311 kb on - strand, within ECD_02923at 3063.365 kb on + strand, within ECD_02923at 3063.365 kb on + strand, within ECD_02923at 3063.365 kb on + strand, within ECD_02923at 3063.365 kb on + strand, within ECD_02923at 3063.366 kb on - strand, within ECD_02923at 3063.366 kb on - strand, within ECD_02923at 3063.496 kb on - strand, within ECD_02923at 3063.536 kb on - strand, within ECD_02923at 3063.536 kb on - strand, within ECD_02923at 3063.536 kb on - strand, within ECD_02923at 3063.559 kb on - strand, within ECD_02923at 3063.628 kb on + strand, within ECD_02923at 3063.629 kb on - strand, within ECD_02923at 3063.629 kb on - strand, within ECD_02923at 3063.629 kb on - strand, within ECD_02923at 3063.629 kb on - strand, within ECD_02923at 3063.629 kb on - strand, within ECD_02923at 3063.653 kb on + strand, within ECD_02923at 3063.779 kb on + strand, within ECD_02923at 3063.779 kb on + strand, within ECD_02923at 3063.780 kb on - strand, within ECD_02923at 3063.780 kb on - strand, within ECD_02923at 3063.780 kb on - strand, within ECD_02923at 3063.780 kb on - strand, within ECD_02923at 3063.780 kb on - strand, within ECD_02923at 3063.780 kb on - strand, within ECD_02923at 3063.804 kb on - strand, within ECD_02923at 3063.830 kb on + strand, within ECD_02923at 3063.961 kb on - strand, within ECD_02923at 3064.085 kb on - strand, within ECD_02923at 3064.115 kb on + strand, within ECD_02923at 3064.116 kb on - strand, within ECD_02923at 3064.119 kb on + strand, within ECD_02923at 3064.119 kb on + strand, within ECD_02923at 3064.119 kb on + strand, within ECD_02923at 3064.265 kb on - strand, within ECD_02923at 3064.444 kb on + strand, within ECD_02923at 3064.468 kb on + strand, within ECD_02923at 3064.468 kb on + strand, within ECD_02923at 3064.468 kb on + strand, within ECD_02923at 3064.469 kb on - strand, within ECD_02923at 3064.469 kb on - strand, within ECD_02923at 3064.469 kb on - strand, within ECD_02923at 3064.469 kb on - strand, within ECD_02923at 3064.469 kb on - strand, within ECD_02923at 3064.469 kb on - strand, within ECD_02923at 3064.540 kb on + strand, within ECD_02923at 3064.541 kb on - strand, within ECD_02923at 3064.541 kb on - strand, within ECD_02923at 3064.541 kb on - strand, within ECD_02923at 3064.620 kb on + strand, within ECD_02923at 3064.621 kb on - strand, within ECD_02923at 3064.621 kb on - strand, within ECD_02923at 3064.695 kb on - strand, within ECD_02923at 3064.695 kb on - strand, within ECD_02923at 3064.756 kb on + strand, within ECD_02923at 3064.881 kb on + strand, within ECD_02923at 3064.881 kb on + strand, within ECD_02923at 3064.882 kb on - strand, within ECD_02923at 3064.882 kb on - strand, within ECD_02923at 3064.929 kb on + strand, within ECD_02923at 3064.930 kb on - strand, within ECD_02923at 3064.930 kb on - strand, within ECD_02923at 3064.930 kb on - strand, within ECD_02923at 3064.930 kb on - strand, within ECD_02923at 3064.930 kb on - strand, within ECD_02923at 3064.930 kb on - strand, within ECD_02923at 3064.930 kb on - strand, within ECD_02923at 3064.952 kb on - strand, within ECD_02923at 3065.005 kb on - strand, within ECD_02923at 3065.008 kb on - strand, within ECD_02923at 3065.120 kb on - strand, within ECD_02923at 3065.185 kb on + strand, within ECD_02923at 3065.186 kb on - strand, within ECD_02923at 3065.397 kb on - strand, within ECD_02923at 3065.450 kb on - strand, within ECD_02923at 3065.465 kb on + strandat 3065.507 kb on - strandat 3065.507 kb on - strandat 3065.507 kb on - strandat 3065.507 kb on - strandat 3065.507 kb on - strandat 3065.632 kb on + strandat 3065.636 kb on + strandat 3065.741 kb on - strandat 3065.741 kb on - strandat 3065.750 kb on + strandat 3065.853 kb on - strandat 3065.908 kb on + strand, within ECD_02924at 3065.908 kb on + strand, within ECD_02924at 3065.909 kb on - strand, within ECD_02924at 3065.909 kb on - strand, within ECD_02924at 3065.909 kb on - strand, within ECD_02924at 3065.909 kb on - strand, within ECD_02924at 3065.909 kb on - strand, within ECD_02924at 3065.909 kb on - strand, within ECD_02924at 3065.909 kb on - strand, within ECD_02924at 3065.909 kb on - strand, within ECD_02924at 3065.940 kb on - strand, within ECD_02924at 3066.087 kb on + strand, within ECD_02924at 3066.111 kb on + strand, within ECD_02924at 3066.111 kb on + strand, within ECD_02924at 3066.161 kb on - strand, within ECD_02924at 3066.225 kb on + strand, within ECD_02924at 3066.226 kb on - strand, within ECD_02924at 3066.276 kb on - strand, within ECD_02924at 3066.276 kb on - strand, within ECD_02924at 3066.353 kb on - strand, within ECD_02924

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas52
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3,062,892 - -0.5
3,062,896 + -0.7
3,062,897 - -2.4
3,062,897 - +2.2
3,062,897 - -0.7
3,063,030 + -1.0
3,063,030 + +0.4
3,063,031 - +2.2
3,063,031 - -0.8
3,063,031 - -1.0
3,063,031 - -0.6
3,063,068 - -1.0
3,063,086 + -0.5
3,063,086 + -2.3
3,063,098 - +0.0
3,063,160 - +0.0
3,063,185 - ECD_02923 0.10 -2.3
3,063,290 - ECD_02923 0.14 +1.0
3,063,310 + ECD_02923 0.14 -2.7
3,063,311 - ECD_02923 0.14 +2.3
3,063,365 + ECD_02923 0.16 -2.2
3,063,365 + ECD_02923 0.16 +4.5
3,063,365 + ECD_02923 0.16 -1.5
3,063,365 + ECD_02923 0.16 -1.5
3,063,366 - ECD_02923 0.16 -2.1
3,063,366 - ECD_02923 0.16 -0.3
3,063,496 - ECD_02923 0.21 -1.9
3,063,536 - ECD_02923 0.22 -1.0
3,063,536 - ECD_02923 0.22 -0.6
3,063,536 - ECD_02923 0.22 -2.8
3,063,559 - ECD_02923 0.23 -3.0
3,063,628 + ECD_02923 0.26 -2.5
3,063,629 - ECD_02923 0.26 -1.7
3,063,629 - ECD_02923 0.26 -1.1
3,063,629 - ECD_02923 0.26 -0.5
3,063,629 - ECD_02923 0.26 -1.6
3,063,629 - ECD_02923 0.26 -1.1
3,063,653 + ECD_02923 0.27 -0.5
3,063,779 + ECD_02923 0.31 -1.9
3,063,779 + ECD_02923 0.31 -0.6
3,063,780 - ECD_02923 0.31 -2.0
3,063,780 - ECD_02923 0.31 -0.7
3,063,780 - ECD_02923 0.31 -1.8
3,063,780 - ECD_02923 0.31 -1.8
3,063,780 - ECD_02923 0.31 -1.6
3,063,780 - ECD_02923 0.31 -1.3
3,063,804 - ECD_02923 0.32 -1.7
3,063,830 + ECD_02923 0.33 +1.3
3,063,961 - ECD_02923 0.37 +0.0
3,064,085 - ECD_02923 0.42 -1.0
3,064,115 + ECD_02923 0.43 +2.0
3,064,116 - ECD_02923 0.43 +0.5
3,064,119 + ECD_02923 0.43 -0.3
3,064,119 + ECD_02923 0.43 -1.0
3,064,119 + ECD_02923 0.43 -1.2
3,064,265 - ECD_02923 0.48 -0.4
3,064,444 + ECD_02923 0.54 +0.5
3,064,468 + ECD_02923 0.55 -2.0
3,064,468 + ECD_02923 0.55 -0.5
3,064,468 + ECD_02923 0.55 -1.0
3,064,469 - ECD_02923 0.55 +3.2
3,064,469 - ECD_02923 0.55 +0.5
3,064,469 - ECD_02923 0.55 -0.9
3,064,469 - ECD_02923 0.55 -0.6
3,064,469 - ECD_02923 0.55 -1.7
3,064,469 - ECD_02923 0.55 -1.4
3,064,540 + ECD_02923 0.58 -2.5
3,064,541 - ECD_02923 0.58 -0.9
3,064,541 - ECD_02923 0.58 -2.0
3,064,541 - ECD_02923 0.58 -2.1
3,064,620 + ECD_02923 0.61 +0.7
3,064,621 - ECD_02923 0.61 +0.4
3,064,621 - ECD_02923 0.61 -1.1
3,064,695 - ECD_02923 0.63 -0.7
3,064,695 - ECD_02923 0.63 -0.7
3,064,756 + ECD_02923 0.65 -2.4
3,064,881 + ECD_02923 0.70 -1.4
3,064,881 + ECD_02923 0.70 -1.4
3,064,882 - ECD_02923 0.70 +0.6
3,064,882 - ECD_02923 0.70 -0.7
3,064,929 + ECD_02923 0.71 -0.5
3,064,930 - ECD_02923 0.71 -1.2
3,064,930 - ECD_02923 0.71 -1.6
3,064,930 - ECD_02923 0.71 +3.3
3,064,930 - ECD_02923 0.71 +2.7
3,064,930 - ECD_02923 0.71 -0.3
3,064,930 - ECD_02923 0.71 -2.3
3,064,930 - ECD_02923 0.71 -2.0
3,064,952 - ECD_02923 0.72 -0.5
3,065,005 - ECD_02923 0.74 +0.7
3,065,008 - ECD_02923 0.74 -1.7
3,065,120 - ECD_02923 0.78 +2.3
3,065,185 + ECD_02923 0.80 -2.5
3,065,186 - ECD_02923 0.80 -3.0
3,065,397 - ECD_02923 0.88 -1.3
3,065,450 - ECD_02923 0.90 -1.1
3,065,465 + -0.5
3,065,507 - -0.6
3,065,507 - -1.5
3,065,507 - -1.9
3,065,507 - +2.7
3,065,507 - -1.7
3,065,632 + -1.3
3,065,636 + -0.1
3,065,741 - -3.4
3,065,741 - -1.1
3,065,750 + -0.4
3,065,853 - -1.8
3,065,908 + ECD_02924 0.11 -2.0
3,065,908 + ECD_02924 0.11 +4.3
3,065,909 - ECD_02924 0.11 +0.7
3,065,909 - ECD_02924 0.11 -0.5
3,065,909 - ECD_02924 0.11 -0.4
3,065,909 - ECD_02924 0.11 +3.2
3,065,909 - ECD_02924 0.11 +2.2
3,065,909 - ECD_02924 0.11 -0.0
3,065,909 - ECD_02924 0.11 -2.0
3,065,909 - ECD_02924 0.11 -0.1
3,065,940 - ECD_02924 0.14 -0.1
3,066,087 + ECD_02924 0.25 +1.6
3,066,111 + ECD_02924 0.27 -0.3
3,066,111 + ECD_02924 0.27 -1.8
3,066,161 - ECD_02924 0.31 -0.3
3,066,225 + ECD_02924 0.35 +1.6
3,066,226 - ECD_02924 0.36 -0.4
3,066,276 - ECD_02924 0.39 -1.0
3,066,276 - ECD_02924 0.39 +1.8
3,066,353 - ECD_02924 0.45 +2.0

Or see this region's nucleotide sequence