Strain Fitness in Escherichia coli BL21 around ECD_02829

Experiment: Bas52

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 nt ECD_02829: ECD_02829 - putative membrane-anchored secretion pathway M-type protein, at 2,962,869 to 2,963,405 _02829 Position (kb) 2962 2963 2964Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3 4at 2961.881 kb on - strandat 2961.935 kb on - strandat 2962.704 kb on + strandat 2962.777 kb on - strandat 2962.866 kb on + strandat 2962.866 kb on + strandat 2963.028 kb on - strand, within ECD_02829at 2963.028 kb on - strand, within ECD_02829at 2963.248 kb on + strand, within ECD_02829at 2963.248 kb on + strand, within ECD_02829at 2963.248 kb on + strand, within ECD_02829at 2963.249 kb on - strand, within ECD_02829at 2963.262 kb on - strand, within ECD_02829at 2963.275 kb on - strand, within ECD_02829at 2963.353 kb on - strandat 2963.353 kb on - strandat 2963.408 kb on + strandat 2963.408 kb on + strandat 2963.409 kb on - strandat 2963.409 kb on - strandat 2963.480 kb on + strandat 2963.480 kb on + strandat 2963.480 kb on + strandat 2963.480 kb on + strandat 2963.481 kb on - strandat 2963.481 kb on - strandat 2963.845 kb on + strandat 2963.942 kb on + strandat 2963.950 kb on - strandat 2964.008 kb on - strandat 2964.008 kb on - strandat 2964.163 kb on - strandat 2964.163 kb on - strandat 2964.249 kb on + strandat 2964.250 kb on - strandat 2964.271 kb on + strandat 2964.271 kb on + strandat 2964.272 kb on - strandat 2964.272 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas52
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2,961,881 - -0.5
2,961,935 - -1.0
2,962,704 + -4.2
2,962,777 - -0.9
2,962,866 + -1.0
2,962,866 + -1.0
2,963,028 - ECD_02829 0.30 +3.9
2,963,028 - ECD_02829 0.30 +0.6
2,963,248 + ECD_02829 0.71 +3.6
2,963,248 + ECD_02829 0.71 +3.7
2,963,248 + ECD_02829 0.71 +3.6
2,963,249 - ECD_02829 0.71 +1.9
2,963,262 - ECD_02829 0.73 +3.2
2,963,275 - ECD_02829 0.76 +3.4
2,963,353 - +3.9
2,963,353 - +3.4
2,963,408 + -1.4
2,963,408 + +1.3
2,963,409 - -0.1
2,963,409 - +2.8
2,963,480 + +2.9
2,963,480 + +2.8
2,963,480 + +3.1
2,963,480 + +3.0
2,963,481 - +3.8
2,963,481 - +3.4
2,963,845 + +3.0
2,963,942 + +3.8
2,963,950 - +3.4
2,964,008 - +3.4
2,964,008 - +3.7
2,964,163 - +3.3
2,964,163 - +3.3
2,964,249 + +4.7
2,964,250 - +3.5
2,964,271 + +4.3
2,964,271 + +3.7
2,964,272 - +3.3
2,964,272 - +3.7

Or see this region's nucleotide sequence