Strain Fitness in Escherichia coli BL21 around ECD_02643

Experiment: Bas52

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02642 and ECD_02643 are separated by 21 nucleotidesECD_02643 and ECD_02644 are separated by 54 nucleotides ECD_02642: ECD_02642 - L-serine dehydratase 2, at 2,762,166 to 2,763,533 _02642 ECD_02643: ECD_02643 - Ssb-binding protein, misidentified as ExoIX, at 2,763,555 to 2,764,400 _02643 ECD_02644: ECD_02644 - L-1,2-propanediol oxidoreductase, at 2,764,455 to 2,765,606 _02644 Position (kb) 2763 2764 2765Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 2762.580 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.592 kb on + strand, within ECD_02642at 2762.593 kb on - strand, within ECD_02642at 2762.593 kb on - strand, within ECD_02642at 2762.593 kb on - strand, within ECD_02642at 2762.593 kb on - strand, within ECD_02642at 2762.595 kb on + strand, within ECD_02642at 2762.595 kb on + strand, within ECD_02642at 2762.596 kb on - strand, within ECD_02642at 2762.596 kb on - strand, within ECD_02642at 2762.596 kb on - strand, within ECD_02642at 2762.596 kb on - strand, within ECD_02642at 2762.600 kb on + strand, within ECD_02642at 2762.600 kb on + strand, within ECD_02642at 2762.600 kb on + strand, within ECD_02642at 2762.601 kb on - strand, within ECD_02642at 2762.601 kb on - strand, within ECD_02642at 2762.893 kb on + strand, within ECD_02642at 2762.918 kb on + strand, within ECD_02642at 2762.918 kb on + strand, within ECD_02642at 2762.919 kb on - strand, within ECD_02642at 2763.042 kb on - strand, within ECD_02642at 2763.060 kb on + strand, within ECD_02642at 2763.060 kb on + strand, within ECD_02642at 2763.061 kb on - strand, within ECD_02642at 2763.063 kb on + strand, within ECD_02642at 2763.109 kb on - strand, within ECD_02642at 2763.141 kb on + strand, within ECD_02642at 2763.141 kb on + strand, within ECD_02642at 2763.142 kb on - strand, within ECD_02642at 2763.143 kb on + strand, within ECD_02642at 2763.144 kb on - strand, within ECD_02642at 2763.235 kb on + strand, within ECD_02642at 2763.235 kb on + strand, within ECD_02642at 2763.238 kb on + strand, within ECD_02642at 2763.328 kb on + strand, within ECD_02642at 2763.367 kb on + strand, within ECD_02642at 2763.389 kb on + strand, within ECD_02642at 2763.389 kb on + strand, within ECD_02642at 2763.450 kb on + strandat 2763.450 kb on + strandat 2763.450 kb on + strandat 2763.451 kb on - strandat 2763.451 kb on - strandat 2763.451 kb on - strandat 2763.461 kb on + strandat 2763.461 kb on + strandat 2763.462 kb on - strandat 2763.467 kb on + strandat 2763.467 kb on + strandat 2763.467 kb on + strandat 2763.467 kb on + strandat 2763.467 kb on + strandat 2763.467 kb on + strandat 2763.468 kb on - strandat 2763.468 kb on - strandat 2763.662 kb on + strand, within ECD_02643at 2763.684 kb on - strand, within ECD_02643at 2763.756 kb on - strand, within ECD_02643at 2763.810 kb on - strand, within ECD_02643at 2763.841 kb on - strand, within ECD_02643at 2763.896 kb on - strand, within ECD_02643at 2764.025 kb on + strand, within ECD_02643at 2764.025 kb on + strand, within ECD_02643at 2764.026 kb on - strand, within ECD_02643at 2764.026 kb on - strand, within ECD_02643at 2764.026 kb on - strand, within ECD_02643at 2764.032 kb on + strand, within ECD_02643at 2764.032 kb on + strand, within ECD_02643at 2764.057 kb on + strand, within ECD_02643at 2764.057 kb on + strand, within ECD_02643at 2764.057 kb on + strand, within ECD_02643at 2764.057 kb on + strand, within ECD_02643at 2764.057 kb on + strand, within ECD_02643at 2764.057 kb on + strand, within ECD_02643at 2764.057 kb on + strand, within ECD_02643at 2764.058 kb on - strand, within ECD_02643at 2764.058 kb on - strand, within ECD_02643at 2764.058 kb on - strand, within ECD_02643at 2764.058 kb on - strand, within ECD_02643at 2764.058 kb on - strand, within ECD_02643at 2764.058 kb on - strand, within ECD_02643at 2764.061 kb on + strand, within ECD_02643at 2764.062 kb on - strand, within ECD_02643at 2764.062 kb on - strand, within ECD_02643at 2764.062 kb on - strand, within ECD_02643at 2764.071 kb on + strand, within ECD_02643at 2764.071 kb on + strand, within ECD_02643at 2764.072 kb on - strand, within ECD_02643at 2764.104 kb on - strand, within ECD_02643at 2764.104 kb on - strand, within ECD_02643at 2764.252 kb on + strand, within ECD_02643at 2764.254 kb on + strand, within ECD_02643at 2764.254 kb on + strand, within ECD_02643at 2764.254 kb on + strand, within ECD_02643at 2764.254 kb on + strand, within ECD_02643at 2764.255 kb on - strand, within ECD_02643at 2764.255 kb on - strand, within ECD_02643at 2764.255 kb on - strand, within ECD_02643at 2764.255 kb on - strand, within ECD_02643at 2764.307 kb on + strand, within ECD_02643at 2764.345 kb on + strandat 2764.467 kb on - strandat 2764.472 kb on - strandat 2764.479 kb on + strandat 2764.480 kb on - strandat 2764.480 kb on - strandat 2764.485 kb on - strandat 2764.573 kb on - strand, within ECD_02644at 2764.647 kb on - strand, within ECD_02644at 2764.647 kb on - strand, within ECD_02644at 2764.667 kb on + strand, within ECD_02644at 2764.667 kb on + strand, within ECD_02644at 2764.667 kb on + strand, within ECD_02644at 2764.668 kb on - strand, within ECD_02644at 2764.668 kb on - strand, within ECD_02644at 2764.668 kb on - strand, within ECD_02644at 2764.668 kb on - strand, within ECD_02644at 2764.668 kb on - strand, within ECD_02644at 2764.668 kb on - strand, within ECD_02644at 2764.709 kb on - strand, within ECD_02644at 2764.734 kb on - strand, within ECD_02644at 2764.734 kb on - strand, within ECD_02644at 2764.736 kb on - strand, within ECD_02644at 2764.736 kb on - strand, within ECD_02644at 2764.736 kb on - strand, within ECD_02644at 2764.736 kb on - strand, within ECD_02644at 2764.788 kb on - strand, within ECD_02644at 2764.788 kb on - strand, within ECD_02644at 2764.788 kb on - strand, within ECD_02644at 2764.789 kb on + strand, within ECD_02644at 2764.790 kb on - strand, within ECD_02644at 2764.815 kb on - strand, within ECD_02644at 2764.864 kb on + strand, within ECD_02644at 2764.864 kb on + strand, within ECD_02644at 2764.865 kb on - strand, within ECD_02644at 2764.865 kb on - strand, within ECD_02644at 2764.898 kb on + strand, within ECD_02644at 2764.949 kb on + strand, within ECD_02644at 2764.950 kb on - strand, within ECD_02644at 2764.989 kb on - strand, within ECD_02644at 2764.991 kb on + strand, within ECD_02644at 2764.991 kb on + strand, within ECD_02644at 2764.991 kb on + strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.992 kb on - strand, within ECD_02644at 2764.993 kb on + strand, within ECD_02644at 2764.994 kb on - strand, within ECD_02644at 2764.994 kb on - strand, within ECD_02644at 2764.994 kb on - strand, within ECD_02644at 2764.994 kb on - strand, within ECD_02644at 2764.994 kb on - strand, within ECD_02644at 2764.994 kb on - strand, within ECD_02644at 2765.004 kb on - strand, within ECD_02644at 2765.004 kb on - strand, within ECD_02644at 2765.054 kb on + strand, within ECD_02644at 2765.079 kb on - strand, within ECD_02644at 2765.152 kb on + strand, within ECD_02644at 2765.152 kb on + strand, within ECD_02644at 2765.153 kb on - strand, within ECD_02644at 2765.153 kb on - strand, within ECD_02644at 2765.153 kb on - strand, within ECD_02644at 2765.157 kb on - strand, within ECD_02644at 2765.208 kb on + strand, within ECD_02644at 2765.294 kb on + strand, within ECD_02644at 2765.295 kb on - strand, within ECD_02644at 2765.295 kb on - strand, within ECD_02644at 2765.301 kb on - strand, within ECD_02644at 2765.301 kb on - strand, within ECD_02644at 2765.359 kb on - strand, within ECD_02644at 2765.384 kb on + strand, within ECD_02644at 2765.384 kb on + strand, within ECD_02644at 2765.384 kb on + strand, within ECD_02644at 2765.384 kb on + strand, within ECD_02644at 2765.385 kb on - strand, within ECD_02644at 2765.385 kb on - strand, within ECD_02644at 2765.385 kb on - strand, within ECD_02644at 2765.385 kb on - strand, within ECD_02644at 2765.385 kb on - strand, within ECD_02644at 2765.385 kb on - strand, within ECD_02644

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas52
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2,762,580 + ECD_02642 0.30 -1.6
2,762,592 + ECD_02642 0.31 -1.1
2,762,592 + ECD_02642 0.31 -2.2
2,762,592 + ECD_02642 0.31 -1.8
2,762,592 + ECD_02642 0.31 -1.4
2,762,592 + ECD_02642 0.31 -0.6
2,762,592 + ECD_02642 0.31 -0.6
2,762,592 + ECD_02642 0.31 -1.1
2,762,592 + ECD_02642 0.31 -0.7
2,762,592 + ECD_02642 0.31 +3.4
2,762,592 + ECD_02642 0.31 -2.3
2,762,592 + ECD_02642 0.31 -0.7
2,762,592 + ECD_02642 0.31 -1.4
2,762,592 + ECD_02642 0.31 -1.0
2,762,592 + ECD_02642 0.31 -0.3
2,762,593 - ECD_02642 0.31 +0.4
2,762,593 - ECD_02642 0.31 -1.5
2,762,593 - ECD_02642 0.31 -0.0
2,762,593 - ECD_02642 0.31 -0.8
2,762,595 + ECD_02642 0.31 +1.1
2,762,595 + ECD_02642 0.31 +0.3
2,762,596 - ECD_02642 0.31 -0.7
2,762,596 - ECD_02642 0.31 -0.2
2,762,596 - ECD_02642 0.31 -0.0
2,762,596 - ECD_02642 0.31 +2.5
2,762,600 + ECD_02642 0.32 -0.8
2,762,600 + ECD_02642 0.32 -0.3
2,762,600 + ECD_02642 0.32 -0.4
2,762,601 - ECD_02642 0.32 -1.0
2,762,601 - ECD_02642 0.32 -2.8
2,762,893 + ECD_02642 0.53 +3.5
2,762,918 + ECD_02642 0.55 -0.3
2,762,918 + ECD_02642 0.55 -0.8
2,762,919 - ECD_02642 0.55 +1.4
2,763,042 - ECD_02642 0.64 -1.4
2,763,060 + ECD_02642 0.65 -1.6
2,763,060 + ECD_02642 0.65 -0.7
2,763,061 - ECD_02642 0.65 +3.9
2,763,063 + ECD_02642 0.66 -2.2
2,763,109 - ECD_02642 0.69 -0.3
2,763,141 + ECD_02642 0.71 -0.7
2,763,141 + ECD_02642 0.71 -0.3
2,763,142 - ECD_02642 0.71 -2.6
2,763,143 + ECD_02642 0.71 -0.0
2,763,144 - ECD_02642 0.71 -1.4
2,763,235 + ECD_02642 0.78 -1.4
2,763,235 + ECD_02642 0.78 -1.4
2,763,238 + ECD_02642 0.78 -0.2
2,763,328 + ECD_02642 0.85 +3.1
2,763,367 + ECD_02642 0.88 -1.6
2,763,389 + ECD_02642 0.89 +0.3
2,763,389 + ECD_02642 0.89 -1.6
2,763,450 + -0.8
2,763,450 + -0.0
2,763,450 + -0.0
2,763,451 - -0.0
2,763,451 - -0.5
2,763,451 - +3.3
2,763,461 + -0.9
2,763,461 + +0.4
2,763,462 - +2.9
2,763,467 + -0.7
2,763,467 + -0.8
2,763,467 + -0.5
2,763,467 + -0.8
2,763,467 + +0.2
2,763,467 + -0.6
2,763,468 - +2.0
2,763,468 - -2.4
2,763,662 + ECD_02643 0.13 +0.3
2,763,684 - ECD_02643 0.15 -0.8
2,763,756 - ECD_02643 0.24 -1.0
2,763,810 - ECD_02643 0.30 +0.3
2,763,841 - ECD_02643 0.34 +1.3
2,763,896 - ECD_02643 0.40 -0.4
2,764,025 + ECD_02643 0.56 -0.4
2,764,025 + ECD_02643 0.56 -0.8
2,764,026 - ECD_02643 0.56 -1.3
2,764,026 - ECD_02643 0.56 -1.3
2,764,026 - ECD_02643 0.56 +0.2
2,764,032 + ECD_02643 0.56 -1.0
2,764,032 + ECD_02643 0.56 -1.6
2,764,057 + ECD_02643 0.59 -1.5
2,764,057 + ECD_02643 0.59 -0.3
2,764,057 + ECD_02643 0.59 +3.5
2,764,057 + ECD_02643 0.59 -0.3
2,764,057 + ECD_02643 0.59 -1.6
2,764,057 + ECD_02643 0.59 -0.9
2,764,057 + ECD_02643 0.59 -1.5
2,764,058 - ECD_02643 0.59 -0.4
2,764,058 - ECD_02643 0.59 -1.0
2,764,058 - ECD_02643 0.59 +0.7
2,764,058 - ECD_02643 0.59 -0.8
2,764,058 - ECD_02643 0.59 -1.3
2,764,058 - ECD_02643 0.59 -1.8
2,764,061 + ECD_02643 0.60 +2.9
2,764,062 - ECD_02643 0.60 -1.1
2,764,062 - ECD_02643 0.60 -2.8
2,764,062 - ECD_02643 0.60 -1.0
2,764,071 + ECD_02643 0.61 +0.5
2,764,071 + ECD_02643 0.61 -2.2
2,764,072 - ECD_02643 0.61 +0.4
2,764,104 - ECD_02643 0.65 -2.6
2,764,104 - ECD_02643 0.65 -0.7
2,764,252 + ECD_02643 0.82 -0.2
2,764,254 + ECD_02643 0.83 +3.9
2,764,254 + ECD_02643 0.83 -0.7
2,764,254 + ECD_02643 0.83 -0.7
2,764,254 + ECD_02643 0.83 -2.4
2,764,255 - ECD_02643 0.83 -1.3
2,764,255 - ECD_02643 0.83 +2.9
2,764,255 - ECD_02643 0.83 -1.0
2,764,255 - ECD_02643 0.83 -0.7
2,764,307 + ECD_02643 0.89 +0.1
2,764,345 + -1.0
2,764,467 - -0.2
2,764,472 - +0.5
2,764,479 + +1.5
2,764,480 - -0.8
2,764,480 - -0.8
2,764,485 - -0.2
2,764,573 - ECD_02644 0.10 -1.2
2,764,647 - ECD_02644 0.17 -0.1
2,764,647 - ECD_02644 0.17 -1.4
2,764,667 + ECD_02644 0.18 -1.0
2,764,667 + ECD_02644 0.18 -1.0
2,764,667 + ECD_02644 0.18 +4.2
2,764,668 - ECD_02644 0.18 -0.0
2,764,668 - ECD_02644 0.18 -0.0
2,764,668 - ECD_02644 0.18 -1.0
2,764,668 - ECD_02644 0.18 -0.5
2,764,668 - ECD_02644 0.18 -1.1
2,764,668 - ECD_02644 0.18 +2.3
2,764,709 - ECD_02644 0.22 +0.3
2,764,734 - ECD_02644 0.24 -0.0
2,764,734 - ECD_02644 0.24 -1.0
2,764,736 - ECD_02644 0.24 +2.8
2,764,736 - ECD_02644 0.24 -1.2
2,764,736 - ECD_02644 0.24 +0.0
2,764,736 - ECD_02644 0.24 -0.5
2,764,788 - ECD_02644 0.29 +0.7
2,764,788 - ECD_02644 0.29 -1.4
2,764,788 - ECD_02644 0.29 -0.2
2,764,789 + ECD_02644 0.29 -0.2
2,764,790 - ECD_02644 0.29 +2.3
2,764,815 - ECD_02644 0.31 -1.7
2,764,864 + ECD_02644 0.36 -0.5
2,764,864 + ECD_02644 0.36 -0.0
2,764,865 - ECD_02644 0.36 -0.9
2,764,865 - ECD_02644 0.36 -1.9
2,764,898 + ECD_02644 0.38 -1.0
2,764,949 + ECD_02644 0.43 -1.6
2,764,950 - ECD_02644 0.43 +2.3
2,764,989 - ECD_02644 0.46 +0.4
2,764,991 + ECD_02644 0.47 -1.6
2,764,991 + ECD_02644 0.47 +0.1
2,764,991 + ECD_02644 0.47 +0.3
2,764,992 - ECD_02644 0.47 -0.7
2,764,992 - ECD_02644 0.47 -0.0
2,764,992 - ECD_02644 0.47 +3.7
2,764,992 - ECD_02644 0.47 -0.2
2,764,992 - ECD_02644 0.47 +2.4
2,764,992 - ECD_02644 0.47 +0.1
2,764,992 - ECD_02644 0.47 -0.9
2,764,992 - ECD_02644 0.47 -0.3
2,764,992 - ECD_02644 0.47 -3.2
2,764,993 + ECD_02644 0.47 +2.7
2,764,994 - ECD_02644 0.47 -0.5
2,764,994 - ECD_02644 0.47 -2.0
2,764,994 - ECD_02644 0.47 -0.8
2,764,994 - ECD_02644 0.47 +2.7
2,764,994 - ECD_02644 0.47 +3.2
2,764,994 - ECD_02644 0.47 -0.6
2,765,004 - ECD_02644 0.48 -2.9
2,765,004 - ECD_02644 0.48 -1.7
2,765,054 + ECD_02644 0.52 +3.3
2,765,079 - ECD_02644 0.54 -0.5
2,765,152 + ECD_02644 0.61 -0.4
2,765,152 + ECD_02644 0.61 +0.1
2,765,153 - ECD_02644 0.61 -0.2
2,765,153 - ECD_02644 0.61 +0.5
2,765,153 - ECD_02644 0.61 -1.9
2,765,157 - ECD_02644 0.61 +0.1
2,765,208 + ECD_02644 0.65 -0.4
2,765,294 + ECD_02644 0.73 +2.3
2,765,295 - ECD_02644 0.73 +3.6
2,765,295 - ECD_02644 0.73 +0.7
2,765,301 - ECD_02644 0.73 -0.0
2,765,301 - ECD_02644 0.73 -0.5
2,765,359 - ECD_02644 0.78 -1.4
2,765,384 + ECD_02644 0.81 +4.1
2,765,384 + ECD_02644 0.81 -0.8
2,765,384 + ECD_02644 0.81 -1.6
2,765,384 + ECD_02644 0.81 +0.0
2,765,385 - ECD_02644 0.81 -1.0
2,765,385 - ECD_02644 0.81 -0.0
2,765,385 - ECD_02644 0.81 -0.7
2,765,385 - ECD_02644 0.81 -2.0
2,765,385 - ECD_02644 0.81 -1.0
2,765,385 - ECD_02644 0.81 +0.3

Or see this region's nucleotide sequence