Experiment: Bas52
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02642 and ECD_02643 are separated by 21 nucleotides ECD_02643 and ECD_02644 are separated by 54 nucleotides
ECD_02642: ECD_02642 - L-serine dehydratase 2, at 2,762,166 to 2,763,533
_02642
ECD_02643: ECD_02643 - Ssb-binding protein, misidentified as ExoIX, at 2,763,555 to 2,764,400
_02643
ECD_02644: ECD_02644 - L-1,2-propanediol oxidoreductase, at 2,764,455 to 2,765,606
_02644
Position (kb)
2763
2764
2765 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2762.580 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.592 kb on + strand, within ECD_02642 at 2762.593 kb on - strand, within ECD_02642 at 2762.593 kb on - strand, within ECD_02642 at 2762.593 kb on - strand, within ECD_02642 at 2762.593 kb on - strand, within ECD_02642 at 2762.595 kb on + strand, within ECD_02642 at 2762.595 kb on + strand, within ECD_02642 at 2762.596 kb on - strand, within ECD_02642 at 2762.596 kb on - strand, within ECD_02642 at 2762.596 kb on - strand, within ECD_02642 at 2762.596 kb on - strand, within ECD_02642 at 2762.600 kb on + strand, within ECD_02642 at 2762.600 kb on + strand, within ECD_02642 at 2762.600 kb on + strand, within ECD_02642 at 2762.601 kb on - strand, within ECD_02642 at 2762.601 kb on - strand, within ECD_02642 at 2762.893 kb on + strand, within ECD_02642 at 2762.918 kb on + strand, within ECD_02642 at 2762.918 kb on + strand, within ECD_02642 at 2762.919 kb on - strand, within ECD_02642 at 2763.042 kb on - strand, within ECD_02642 at 2763.060 kb on + strand, within ECD_02642 at 2763.060 kb on + strand, within ECD_02642 at 2763.061 kb on - strand, within ECD_02642 at 2763.063 kb on + strand, within ECD_02642 at 2763.109 kb on - strand, within ECD_02642 at 2763.141 kb on + strand, within ECD_02642 at 2763.141 kb on + strand, within ECD_02642 at 2763.142 kb on - strand, within ECD_02642 at 2763.143 kb on + strand, within ECD_02642 at 2763.144 kb on - strand, within ECD_02642 at 2763.235 kb on + strand, within ECD_02642 at 2763.235 kb on + strand, within ECD_02642 at 2763.238 kb on + strand, within ECD_02642 at 2763.328 kb on + strand, within ECD_02642 at 2763.367 kb on + strand, within ECD_02642 at 2763.389 kb on + strand, within ECD_02642 at 2763.389 kb on + strand, within ECD_02642 at 2763.450 kb on + strand at 2763.450 kb on + strand at 2763.450 kb on + strand at 2763.451 kb on - strand at 2763.451 kb on - strand at 2763.451 kb on - strand at 2763.461 kb on + strand at 2763.461 kb on + strand at 2763.462 kb on - strand at 2763.467 kb on + strand at 2763.467 kb on + strand at 2763.467 kb on + strand at 2763.467 kb on + strand at 2763.467 kb on + strand at 2763.467 kb on + strand at 2763.468 kb on - strand at 2763.468 kb on - strand at 2763.662 kb on + strand, within ECD_02643 at 2763.684 kb on - strand, within ECD_02643 at 2763.756 kb on - strand, within ECD_02643 at 2763.810 kb on - strand, within ECD_02643 at 2763.841 kb on - strand, within ECD_02643 at 2763.896 kb on - strand, within ECD_02643 at 2764.025 kb on + strand, within ECD_02643 at 2764.025 kb on + strand, within ECD_02643 at 2764.026 kb on - strand, within ECD_02643 at 2764.026 kb on - strand, within ECD_02643 at 2764.026 kb on - strand, within ECD_02643 at 2764.032 kb on + strand, within ECD_02643 at 2764.032 kb on + strand, within ECD_02643 at 2764.057 kb on + strand, within ECD_02643 at 2764.057 kb on + strand, within ECD_02643 at 2764.057 kb on + strand, within ECD_02643 at 2764.057 kb on + strand, within ECD_02643 at 2764.057 kb on + strand, within ECD_02643 at 2764.057 kb on + strand, within ECD_02643 at 2764.057 kb on + strand, within ECD_02643 at 2764.058 kb on - strand, within ECD_02643 at 2764.058 kb on - strand, within ECD_02643 at 2764.058 kb on - strand, within ECD_02643 at 2764.058 kb on - strand, within ECD_02643 at 2764.058 kb on - strand, within ECD_02643 at 2764.058 kb on - strand, within ECD_02643 at 2764.061 kb on + strand, within ECD_02643 at 2764.062 kb on - strand, within ECD_02643 at 2764.062 kb on - strand, within ECD_02643 at 2764.062 kb on - strand, within ECD_02643 at 2764.071 kb on + strand, within ECD_02643 at 2764.071 kb on + strand, within ECD_02643 at 2764.072 kb on - strand, within ECD_02643 at 2764.104 kb on - strand, within ECD_02643 at 2764.104 kb on - strand, within ECD_02643 at 2764.252 kb on + strand, within ECD_02643 at 2764.254 kb on + strand, within ECD_02643 at 2764.254 kb on + strand, within ECD_02643 at 2764.254 kb on + strand, within ECD_02643 at 2764.254 kb on + strand, within ECD_02643 at 2764.255 kb on - strand, within ECD_02643 at 2764.255 kb on - strand, within ECD_02643 at 2764.255 kb on - strand, within ECD_02643 at 2764.255 kb on - strand, within ECD_02643 at 2764.307 kb on + strand, within ECD_02643 at 2764.345 kb on + strand at 2764.467 kb on - strand at 2764.472 kb on - strand at 2764.479 kb on + strand at 2764.480 kb on - strand at 2764.480 kb on - strand at 2764.485 kb on - strand at 2764.573 kb on - strand, within ECD_02644 at 2764.647 kb on - strand, within ECD_02644 at 2764.647 kb on - strand, within ECD_02644 at 2764.667 kb on + strand, within ECD_02644 at 2764.667 kb on + strand, within ECD_02644 at 2764.667 kb on + strand, within ECD_02644 at 2764.668 kb on - strand, within ECD_02644 at 2764.668 kb on - strand, within ECD_02644 at 2764.668 kb on - strand, within ECD_02644 at 2764.668 kb on - strand, within ECD_02644 at 2764.668 kb on - strand, within ECD_02644 at 2764.668 kb on - strand, within ECD_02644 at 2764.709 kb on - strand, within ECD_02644 at 2764.734 kb on - strand, within ECD_02644 at 2764.734 kb on - strand, within ECD_02644 at 2764.736 kb on - strand, within ECD_02644 at 2764.736 kb on - strand, within ECD_02644 at 2764.736 kb on - strand, within ECD_02644 at 2764.736 kb on - strand, within ECD_02644 at 2764.788 kb on - strand, within ECD_02644 at 2764.788 kb on - strand, within ECD_02644 at 2764.788 kb on - strand, within ECD_02644 at 2764.789 kb on + strand, within ECD_02644 at 2764.790 kb on - strand, within ECD_02644 at 2764.815 kb on - strand, within ECD_02644 at 2764.864 kb on + strand, within ECD_02644 at 2764.864 kb on + strand, within ECD_02644 at 2764.865 kb on - strand, within ECD_02644 at 2764.865 kb on - strand, within ECD_02644 at 2764.898 kb on + strand, within ECD_02644 at 2764.949 kb on + strand, within ECD_02644 at 2764.950 kb on - strand, within ECD_02644 at 2764.989 kb on - strand, within ECD_02644 at 2764.991 kb on + strand, within ECD_02644 at 2764.991 kb on + strand, within ECD_02644 at 2764.991 kb on + strand, within ECD_02644 at 2764.992 kb on - strand, within ECD_02644 at 2764.992 kb on - strand, within ECD_02644 at 2764.992 kb on - strand, within ECD_02644 at 2764.992 kb on - strand, within ECD_02644 at 2764.992 kb on - strand, within ECD_02644 at 2764.992 kb on - strand, within ECD_02644 at 2764.992 kb on - strand, within ECD_02644 at 2764.992 kb on - strand, within ECD_02644 at 2764.992 kb on - strand, within ECD_02644 at 2764.993 kb on + strand, within ECD_02644 at 2764.994 kb on - strand, within ECD_02644 at 2764.994 kb on - strand, within ECD_02644 at 2764.994 kb on - strand, within ECD_02644 at 2764.994 kb on - strand, within ECD_02644 at 2764.994 kb on - strand, within ECD_02644 at 2764.994 kb on - strand, within ECD_02644 at 2765.004 kb on - strand, within ECD_02644 at 2765.004 kb on - strand, within ECD_02644 at 2765.054 kb on + strand, within ECD_02644 at 2765.079 kb on - strand, within ECD_02644 at 2765.152 kb on + strand, within ECD_02644 at 2765.152 kb on + strand, within ECD_02644 at 2765.153 kb on - strand, within ECD_02644 at 2765.153 kb on - strand, within ECD_02644 at 2765.153 kb on - strand, within ECD_02644 at 2765.157 kb on - strand, within ECD_02644 at 2765.208 kb on + strand, within ECD_02644 at 2765.294 kb on + strand, within ECD_02644 at 2765.295 kb on - strand, within ECD_02644 at 2765.295 kb on - strand, within ECD_02644 at 2765.301 kb on - strand, within ECD_02644 at 2765.301 kb on - strand, within ECD_02644 at 2765.359 kb on - strand, within ECD_02644 at 2765.384 kb on + strand, within ECD_02644 at 2765.384 kb on + strand, within ECD_02644 at 2765.384 kb on + strand, within ECD_02644 at 2765.384 kb on + strand, within ECD_02644 at 2765.385 kb on - strand, within ECD_02644 at 2765.385 kb on - strand, within ECD_02644 at 2765.385 kb on - strand, within ECD_02644 at 2765.385 kb on - strand, within ECD_02644 at 2765.385 kb on - strand, within ECD_02644 at 2765.385 kb on - strand, within ECD_02644
Per-strain Table
Position Strand Gene LocusTag Fraction Bas52 remove 2,762,580 + ECD_02642 0.30 -1.6 2,762,592 + ECD_02642 0.31 -1.1 2,762,592 + ECD_02642 0.31 -2.2 2,762,592 + ECD_02642 0.31 -1.8 2,762,592 + ECD_02642 0.31 -1.4 2,762,592 + ECD_02642 0.31 -0.6 2,762,592 + ECD_02642 0.31 -0.6 2,762,592 + ECD_02642 0.31 -1.1 2,762,592 + ECD_02642 0.31 -0.7 2,762,592 + ECD_02642 0.31 +3.4 2,762,592 + ECD_02642 0.31 -2.3 2,762,592 + ECD_02642 0.31 -0.7 2,762,592 + ECD_02642 0.31 -1.4 2,762,592 + ECD_02642 0.31 -1.0 2,762,592 + ECD_02642 0.31 -0.3 2,762,593 - ECD_02642 0.31 +0.4 2,762,593 - ECD_02642 0.31 -1.5 2,762,593 - ECD_02642 0.31 -0.0 2,762,593 - ECD_02642 0.31 -0.8 2,762,595 + ECD_02642 0.31 +1.1 2,762,595 + ECD_02642 0.31 +0.3 2,762,596 - ECD_02642 0.31 -0.7 2,762,596 - ECD_02642 0.31 -0.2 2,762,596 - ECD_02642 0.31 -0.0 2,762,596 - ECD_02642 0.31 +2.5 2,762,600 + ECD_02642 0.32 -0.8 2,762,600 + ECD_02642 0.32 -0.3 2,762,600 + ECD_02642 0.32 -0.4 2,762,601 - ECD_02642 0.32 -1.0 2,762,601 - ECD_02642 0.32 -2.8 2,762,893 + ECD_02642 0.53 +3.5 2,762,918 + ECD_02642 0.55 -0.3 2,762,918 + ECD_02642 0.55 -0.8 2,762,919 - ECD_02642 0.55 +1.4 2,763,042 - ECD_02642 0.64 -1.4 2,763,060 + ECD_02642 0.65 -1.6 2,763,060 + ECD_02642 0.65 -0.7 2,763,061 - ECD_02642 0.65 +3.9 2,763,063 + ECD_02642 0.66 -2.2 2,763,109 - ECD_02642 0.69 -0.3 2,763,141 + ECD_02642 0.71 -0.7 2,763,141 + ECD_02642 0.71 -0.3 2,763,142 - ECD_02642 0.71 -2.6 2,763,143 + ECD_02642 0.71 -0.0 2,763,144 - ECD_02642 0.71 -1.4 2,763,235 + ECD_02642 0.78 -1.4 2,763,235 + ECD_02642 0.78 -1.4 2,763,238 + ECD_02642 0.78 -0.2 2,763,328 + ECD_02642 0.85 +3.1 2,763,367 + ECD_02642 0.88 -1.6 2,763,389 + ECD_02642 0.89 +0.3 2,763,389 + ECD_02642 0.89 -1.6 2,763,450 + -0.8 2,763,450 + -0.0 2,763,450 + -0.0 2,763,451 - -0.0 2,763,451 - -0.5 2,763,451 - +3.3 2,763,461 + -0.9 2,763,461 + +0.4 2,763,462 - +2.9 2,763,467 + -0.7 2,763,467 + -0.8 2,763,467 + -0.5 2,763,467 + -0.8 2,763,467 + +0.2 2,763,467 + -0.6 2,763,468 - +2.0 2,763,468 - -2.4 2,763,662 + ECD_02643 0.13 +0.3 2,763,684 - ECD_02643 0.15 -0.8 2,763,756 - ECD_02643 0.24 -1.0 2,763,810 - ECD_02643 0.30 +0.3 2,763,841 - ECD_02643 0.34 +1.3 2,763,896 - ECD_02643 0.40 -0.4 2,764,025 + ECD_02643 0.56 -0.4 2,764,025 + ECD_02643 0.56 -0.8 2,764,026 - ECD_02643 0.56 -1.3 2,764,026 - ECD_02643 0.56 -1.3 2,764,026 - ECD_02643 0.56 +0.2 2,764,032 + ECD_02643 0.56 -1.0 2,764,032 + ECD_02643 0.56 -1.6 2,764,057 + ECD_02643 0.59 -1.5 2,764,057 + ECD_02643 0.59 -0.3 2,764,057 + ECD_02643 0.59 +3.5 2,764,057 + ECD_02643 0.59 -0.3 2,764,057 + ECD_02643 0.59 -1.6 2,764,057 + ECD_02643 0.59 -0.9 2,764,057 + ECD_02643 0.59 -1.5 2,764,058 - ECD_02643 0.59 -0.4 2,764,058 - ECD_02643 0.59 -1.0 2,764,058 - ECD_02643 0.59 +0.7 2,764,058 - ECD_02643 0.59 -0.8 2,764,058 - ECD_02643 0.59 -1.3 2,764,058 - ECD_02643 0.59 -1.8 2,764,061 + ECD_02643 0.60 +2.9 2,764,062 - ECD_02643 0.60 -1.1 2,764,062 - ECD_02643 0.60 -2.8 2,764,062 - ECD_02643 0.60 -1.0 2,764,071 + ECD_02643 0.61 +0.5 2,764,071 + ECD_02643 0.61 -2.2 2,764,072 - ECD_02643 0.61 +0.4 2,764,104 - ECD_02643 0.65 -2.6 2,764,104 - ECD_02643 0.65 -0.7 2,764,252 + ECD_02643 0.82 -0.2 2,764,254 + ECD_02643 0.83 +3.9 2,764,254 + ECD_02643 0.83 -0.7 2,764,254 + ECD_02643 0.83 -0.7 2,764,254 + ECD_02643 0.83 -2.4 2,764,255 - ECD_02643 0.83 -1.3 2,764,255 - ECD_02643 0.83 +2.9 2,764,255 - ECD_02643 0.83 -1.0 2,764,255 - ECD_02643 0.83 -0.7 2,764,307 + ECD_02643 0.89 +0.1 2,764,345 + -1.0 2,764,467 - -0.2 2,764,472 - +0.5 2,764,479 + +1.5 2,764,480 - -0.8 2,764,480 - -0.8 2,764,485 - -0.2 2,764,573 - ECD_02644 0.10 -1.2 2,764,647 - ECD_02644 0.17 -0.1 2,764,647 - ECD_02644 0.17 -1.4 2,764,667 + ECD_02644 0.18 -1.0 2,764,667 + ECD_02644 0.18 -1.0 2,764,667 + ECD_02644 0.18 +4.2 2,764,668 - ECD_02644 0.18 -0.0 2,764,668 - ECD_02644 0.18 -0.0 2,764,668 - ECD_02644 0.18 -1.0 2,764,668 - ECD_02644 0.18 -0.5 2,764,668 - ECD_02644 0.18 -1.1 2,764,668 - ECD_02644 0.18 +2.3 2,764,709 - ECD_02644 0.22 +0.3 2,764,734 - ECD_02644 0.24 -0.0 2,764,734 - ECD_02644 0.24 -1.0 2,764,736 - ECD_02644 0.24 +2.8 2,764,736 - ECD_02644 0.24 -1.2 2,764,736 - ECD_02644 0.24 +0.0 2,764,736 - ECD_02644 0.24 -0.5 2,764,788 - ECD_02644 0.29 +0.7 2,764,788 - ECD_02644 0.29 -1.4 2,764,788 - ECD_02644 0.29 -0.2 2,764,789 + ECD_02644 0.29 -0.2 2,764,790 - ECD_02644 0.29 +2.3 2,764,815 - ECD_02644 0.31 -1.7 2,764,864 + ECD_02644 0.36 -0.5 2,764,864 + ECD_02644 0.36 -0.0 2,764,865 - ECD_02644 0.36 -0.9 2,764,865 - ECD_02644 0.36 -1.9 2,764,898 + ECD_02644 0.38 -1.0 2,764,949 + ECD_02644 0.43 -1.6 2,764,950 - ECD_02644 0.43 +2.3 2,764,989 - ECD_02644 0.46 +0.4 2,764,991 + ECD_02644 0.47 -1.6 2,764,991 + ECD_02644 0.47 +0.1 2,764,991 + ECD_02644 0.47 +0.3 2,764,992 - ECD_02644 0.47 -0.7 2,764,992 - ECD_02644 0.47 -0.0 2,764,992 - ECD_02644 0.47 +3.7 2,764,992 - ECD_02644 0.47 -0.2 2,764,992 - ECD_02644 0.47 +2.4 2,764,992 - ECD_02644 0.47 +0.1 2,764,992 - ECD_02644 0.47 -0.9 2,764,992 - ECD_02644 0.47 -0.3 2,764,992 - ECD_02644 0.47 -3.2 2,764,993 + ECD_02644 0.47 +2.7 2,764,994 - ECD_02644 0.47 -0.5 2,764,994 - ECD_02644 0.47 -2.0 2,764,994 - ECD_02644 0.47 -0.8 2,764,994 - ECD_02644 0.47 +2.7 2,764,994 - ECD_02644 0.47 +3.2 2,764,994 - ECD_02644 0.47 -0.6 2,765,004 - ECD_02644 0.48 -2.9 2,765,004 - ECD_02644 0.48 -1.7 2,765,054 + ECD_02644 0.52 +3.3 2,765,079 - ECD_02644 0.54 -0.5 2,765,152 + ECD_02644 0.61 -0.4 2,765,152 + ECD_02644 0.61 +0.1 2,765,153 - ECD_02644 0.61 -0.2 2,765,153 - ECD_02644 0.61 +0.5 2,765,153 - ECD_02644 0.61 -1.9 2,765,157 - ECD_02644 0.61 +0.1 2,765,208 + ECD_02644 0.65 -0.4 2,765,294 + ECD_02644 0.73 +2.3 2,765,295 - ECD_02644 0.73 +3.6 2,765,295 - ECD_02644 0.73 +0.7 2,765,301 - ECD_02644 0.73 -0.0 2,765,301 - ECD_02644 0.73 -0.5 2,765,359 - ECD_02644 0.78 -1.4 2,765,384 + ECD_02644 0.81 +4.1 2,765,384 + ECD_02644 0.81 -0.8 2,765,384 + ECD_02644 0.81 -1.6 2,765,384 + ECD_02644 0.81 +0.0 2,765,385 - ECD_02644 0.81 -1.0 2,765,385 - ECD_02644 0.81 -0.0 2,765,385 - ECD_02644 0.81 -0.7 2,765,385 - ECD_02644 0.81 -2.0 2,765,385 - ECD_02644 0.81 -1.0 2,765,385 - ECD_02644 0.81 +0.3
Or see this region's nucleotide sequence