Strain Fitness in Escherichia coli BL21 around ECD_04323

Experiment: Bas27

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01763 and ECD_04323 are separated by 32 nucleotidesECD_04323 and ECD_01764 are separated by 135 nucleotidesECD_01764 and ECD_01765 are separated by 147 nucleotidesECD_01765 and ECD_01766 are separated by 3 nucleotides ECD_01763: ECD_01763 - diguanylate cyclase, at 1,822,092 to 1,823,117 _01763 ECD_04323: ECD_04323 - inner membrane-associated protein, at 1,823,150 to 1,823,248 _04323 ECD_01764: ECD_01764 - UPF0410 family protein, at 1,823,384 to 1,823,632 _01764 ECD_01765: ECD_01765 - uncharacterized protein, at 1,823,780 to 1,823,962 _01765 ECD_01766: ECD_01766 - DUF1971 family protein, nitrate-inducible, at 1,823,966 to 1,824,190 _01766 Position (kb) 1823 1824Strain fitness (log2 ratio) -1 0 1at 1822.247 kb on + strand, within ECD_01763at 1822.248 kb on - strand, within ECD_01763at 1823.474 kb on - strand, within ECD_01764at 1823.947 kb on - strandat 1823.947 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas27
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1,822,247 + ECD_01763 0.15 +1.3
1,822,248 - ECD_01763 0.15 -0.5
1,823,474 - ECD_01764 0.36 +0.5
1,823,947 - -0.1
1,823,947 - -0.2

Or see this region's nucleotide sequence