Strain Fitness in Escherichia coli BL21 around ECD_04027

Experiment: Bas27

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_04026 and ECD_04027 are separated by 324 nucleotidesECD_04027 and ECD_04028 are separated by 218 nucleotides ECD_04026: ECD_04026 - anaerobic fumarate reductase catalytic and NAD/flavoprotein subunit, at 4,287,586 to 4,289,394 _04026 ECD_04027: ECD_04027 - Elongation Factor P Lys34 lysyltransferase, at 4,289,719 to 4,290,696 _04027 ECD_04028: ECD_04028 - putative transporter, at 4,290,915 to 4,292,417 _04028 Position (kb) 4289 4290 4291Strain fitness (log2 ratio) -2 -1 0 1 2at 4288.749 kb on + strand, within ECD_04026at 4288.790 kb on + strand, within ECD_04026at 4288.989 kb on + strand, within ECD_04026at 4288.989 kb on + strand, within ECD_04026at 4288.989 kb on + strand, within ECD_04026at 4288.990 kb on - strand, within ECD_04026at 4289.005 kb on - strand, within ECD_04026at 4289.022 kb on + strand, within ECD_04026at 4289.265 kb on + strandat 4289.265 kb on + strandat 4289.290 kb on + strandat 4289.291 kb on - strandat 4289.341 kb on + strandat 4289.363 kb on - strandat 4289.442 kb on - strandat 4289.442 kb on - strandat 4289.473 kb on - strandat 4289.489 kb on - strandat 4289.490 kb on + strandat 4289.491 kb on - strandat 4289.494 kb on + strandat 4289.494 kb on + strandat 4289.495 kb on - strandat 4289.502 kb on + strandat 4289.502 kb on + strandat 4289.503 kb on - strandat 4289.504 kb on + strandat 4289.505 kb on - strandat 4289.505 kb on - strandat 4289.569 kb on - strandat 4289.569 kb on - strandat 4289.589 kb on + strandat 4289.597 kb on - strandat 4289.682 kb on - strandat 4290.828 kb on + strandat 4290.888 kb on - strandat 4290.956 kb on - strandat 4291.197 kb on + strand, within ECD_04028at 4291.197 kb on + strand, within ECD_04028at 4291.199 kb on + strand, within ECD_04028at 4291.217 kb on + strand, within ECD_04028at 4291.218 kb on - strand, within ECD_04028at 4291.257 kb on + strand, within ECD_04028at 4291.304 kb on + strand, within ECD_04028

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas27
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4,288,749 + ECD_04026 0.64 +0.5
4,288,790 + ECD_04026 0.67 +0.1
4,288,989 + ECD_04026 0.78 -1.4
4,288,989 + ECD_04026 0.78 -0.9
4,288,989 + ECD_04026 0.78 +0.1
4,288,990 - ECD_04026 0.78 -0.2
4,289,005 - ECD_04026 0.78 -0.6
4,289,022 + ECD_04026 0.79 -0.3
4,289,265 + -0.4
4,289,265 + +0.6
4,289,290 + -2.1
4,289,291 - -0.3
4,289,341 + +0.0
4,289,363 - -0.4
4,289,442 - +0.0
4,289,442 - +0.7
4,289,473 - -0.3
4,289,489 - -1.2
4,289,490 + +0.7
4,289,491 - -0.0
4,289,494 + +0.9
4,289,494 + +0.2
4,289,495 - +0.5
4,289,502 + -0.7
4,289,502 + +0.3
4,289,503 - +0.5
4,289,504 + +1.2
4,289,505 - -0.1
4,289,505 - +0.6
4,289,569 - -0.2
4,289,569 - -2.0
4,289,589 + -0.2
4,289,597 - -0.1
4,289,682 - -0.3
4,290,828 + +0.1
4,290,888 - +0.5
4,290,956 - +1.8
4,291,197 + ECD_04028 0.19 +0.5
4,291,197 + ECD_04028 0.19 -0.3
4,291,199 + ECD_04028 0.19 -0.4
4,291,217 + ECD_04028 0.20 +0.6
4,291,218 - ECD_04028 0.20 +0.6
4,291,257 + ECD_04028 0.23 -0.1
4,291,304 + ECD_04028 0.26 -0.1

Or see this region's nucleotide sequence