Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03734 and ECD_03735 are separated by 45 nucleotides ECD_03735 and ECD_03736 are separated by 282 nucleotides
ECD_03734: ECD_03734 - 3-octaprenyl-4-hydroxybenzoate decarboxylase, at 3,931,899 to 3,933,392
_03734
ECD_03735: ECD_03735 - NAD(P)H-flavin reductase, at 3,933,438 to 3,934,139
_03735
ECD_03736: ECD_03736 - 3-ketoacyl-CoA thiolase (thiolase I), at 3,934,422 to 3,935,585
_03736
Position (kb)
3933
3934
3935 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3933.371 kb on + strand at 3933.371 kb on + strand at 3933.380 kb on + strand at 3933.381 kb on - strand at 3933.381 kb on - strand at 3933.412 kb on - strand at 3933.416 kb on - strand at 3933.448 kb on + strand at 3933.449 kb on - strand at 3933.449 kb on - strand at 3933.449 kb on - strand at 3933.490 kb on + strand at 3933.490 kb on + strand at 3933.491 kb on - strand at 3933.491 kb on - strand at 3933.493 kb on - strand at 3933.543 kb on + strand, within ECD_03735 at 3933.629 kb on + strand, within ECD_03735 at 3933.630 kb on - strand, within ECD_03735 at 3933.836 kb on + strand, within ECD_03735 at 3933.876 kb on + strand, within ECD_03735 at 3933.877 kb on - strand, within ECD_03735 at 3933.877 kb on - strand, within ECD_03735 at 3934.028 kb on + strand, within ECD_03735 at 3934.028 kb on + strand, within ECD_03735 at 3934.028 kb on + strand, within ECD_03735 at 3934.028 kb on + strand, within ECD_03735 at 3934.028 kb on + strand, within ECD_03735 at 3934.029 kb on - strand, within ECD_03735 at 3934.029 kb on - strand, within ECD_03735 at 3934.032 kb on + strand, within ECD_03735 at 3934.032 kb on + strand, within ECD_03735 at 3934.032 kb on + strand, within ECD_03735 at 3934.033 kb on - strand, within ECD_03735 at 3934.033 kb on - strand, within ECD_03735 at 3934.033 kb on - strand, within ECD_03735 at 3934.033 kb on - strand, within ECD_03735 at 3934.035 kb on - strand, within ECD_03735 at 3934.133 kb on + strand at 3934.144 kb on + strand at 3934.144 kb on + strand at 3934.191 kb on + strand at 3934.205 kb on + strand at 3934.211 kb on + strand at 3934.212 kb on - strand at 3934.212 kb on - strand at 3934.218 kb on + strand at 3934.219 kb on - strand at 3934.219 kb on - strand at 3934.257 kb on + strand at 3934.266 kb on + strand at 3934.267 kb on - strand at 3934.272 kb on + strand at 3934.272 kb on + strand at 3934.273 kb on - strand at 3934.356 kb on - strand at 3934.466 kb on + strand at 3934.467 kb on - strand at 3934.628 kb on + strand, within ECD_03736 at 3934.631 kb on + strand, within ECD_03736 at 3934.810 kb on - strand, within ECD_03736 at 3934.810 kb on - strand, within ECD_03736 at 3934.877 kb on + strand, within ECD_03736 at 3934.878 kb on - strand, within ECD_03736 at 3934.892 kb on + strand, within ECD_03736 at 3935.118 kb on - strand, within ECD_03736 at 3935.118 kb on - strand, within ECD_03736 at 3935.118 kb on - strand, within ECD_03736
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 3,933,371 + -0.6 3,933,371 + +0.9 3,933,380 + -0.1 3,933,381 - -0.7 3,933,381 - -2.0 3,933,412 - +0.2 3,933,416 - +0.4 3,933,448 + +0.1 3,933,449 - +0.1 3,933,449 - -0.8 3,933,449 - -2.8 3,933,490 + -0.6 3,933,490 + +0.1 3,933,491 - -0.3 3,933,491 - -0.9 3,933,493 - +0.7 3,933,543 + ECD_03735 0.15 -0.8 3,933,629 + ECD_03735 0.27 -2.8 3,933,630 - ECD_03735 0.27 -0.6 3,933,836 + ECD_03735 0.57 +0.7 3,933,876 + ECD_03735 0.62 -1.0 3,933,877 - ECD_03735 0.63 +0.7 3,933,877 - ECD_03735 0.63 +0.6 3,934,028 + ECD_03735 0.84 -1.1 3,934,028 + ECD_03735 0.84 -1.5 3,934,028 + ECD_03735 0.84 -1.2 3,934,028 + ECD_03735 0.84 -1.8 3,934,028 + ECD_03735 0.84 -0.4 3,934,029 - ECD_03735 0.84 -1.1 3,934,029 - ECD_03735 0.84 -0.6 3,934,032 + ECD_03735 0.85 -0.5 3,934,032 + ECD_03735 0.85 -0.8 3,934,032 + ECD_03735 0.85 -2.0 3,934,033 - ECD_03735 0.85 -1.8 3,934,033 - ECD_03735 0.85 -0.8 3,934,033 - ECD_03735 0.85 +0.1 3,934,033 - ECD_03735 0.85 -0.1 3,934,035 - ECD_03735 0.85 -2.2 3,934,133 + -1.6 3,934,144 + +0.2 3,934,144 + -0.2 3,934,191 + +0.2 3,934,205 + -0.3 3,934,211 + +0.7 3,934,212 - -0.2 3,934,212 - +0.2 3,934,218 + +0.7 3,934,219 - +0.1 3,934,219 - -0.7 3,934,257 + -0.5 3,934,266 + +0.6 3,934,267 - +0.0 3,934,272 + +0.1 3,934,272 + +0.3 3,934,273 - +0.7 3,934,356 - +0.3 3,934,466 + -0.1 3,934,467 - -1.1 3,934,628 + ECD_03736 0.18 +0.0 3,934,631 + ECD_03736 0.18 -0.6 3,934,810 - ECD_03736 0.33 -1.4 3,934,810 - ECD_03736 0.33 +0.4 3,934,877 + ECD_03736 0.39 +1.0 3,934,878 - ECD_03736 0.39 -0.3 3,934,892 + ECD_03736 0.40 +0.1 3,935,118 - ECD_03736 0.60 -1.0 3,935,118 - ECD_03736 0.60 -1.0 3,935,118 - ECD_03736 0.60 +0.6
Or see this region's nucleotide sequence