Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02945 and ECD_02946 overlap by 4 nucleotides ECD_02946 and ECD_02947 are separated by 62 nucleotides
ECD_02945: ECD_02945 - evolved beta-D-galactosidase, alpha subunit, at 3,088,715 to 3,091,807
_02945
ECD_02946: ECD_02946 - evolved beta-D-galactosidase, beta subunit; cupin superfamily, at 3,091,804 to 3,092,253
_02946
ECD_02947: ECD_02947 - putative transporter, at 3,092,316 to 3,093,749
_02947
Position (kb)
3091
3092
3093 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3090.850 kb on + strand, within ECD_02945 at 3090.850 kb on + strand, within ECD_02945 at 3091.101 kb on + strand, within ECD_02945 at 3091.184 kb on + strand, within ECD_02945 at 3091.184 kb on + strand, within ECD_02945 at 3091.184 kb on + strand, within ECD_02945 at 3091.185 kb on - strand, within ECD_02945 at 3091.185 kb on - strand, within ECD_02945 at 3091.185 kb on - strand, within ECD_02945 at 3091.320 kb on - strand, within ECD_02945 at 3091.320 kb on - strand, within ECD_02945 at 3091.343 kb on + strand, within ECD_02945 at 3091.375 kb on + strand, within ECD_02945 at 3091.412 kb on + strand, within ECD_02945 at 3091.413 kb on - strand, within ECD_02945 at 3091.435 kb on + strand, within ECD_02945 at 3091.513 kb on + strand at 3091.532 kb on + strand at 3091.532 kb on + strand at 3091.532 kb on + strand at 3091.533 kb on - strand at 3091.533 kb on - strand at 3091.533 kb on - strand at 3091.534 kb on + strand at 3091.568 kb on - strand at 3091.692 kb on - strand at 3091.692 kb on - strand at 3091.699 kb on + strand at 3091.700 kb on - strand at 3091.751 kb on + strand at 3091.752 kb on - strand at 3091.823 kb on + strand at 3091.823 kb on + strand at 3091.824 kb on - strand at 3091.824 kb on - strand at 3091.824 kb on - strand at 3091.843 kb on + strand at 3091.943 kb on - strand, within ECD_02946 at 3092.011 kb on + strand, within ECD_02946 at 3092.337 kb on - strand at 3092.337 kb on - strand at 3092.468 kb on + strand, within ECD_02947 at 3092.573 kb on + strand, within ECD_02947 at 3092.577 kb on - strand, within ECD_02947 at 3092.585 kb on + strand, within ECD_02947 at 3092.589 kb on + strand, within ECD_02947 at 3092.673 kb on + strand, within ECD_02947 at 3092.673 kb on + strand, within ECD_02947 at 3092.674 kb on - strand, within ECD_02947 at 3092.675 kb on + strand, within ECD_02947 at 3092.675 kb on + strand, within ECD_02947 at 3092.708 kb on + strand, within ECD_02947 at 3092.815 kb on - strand, within ECD_02947 at 3092.831 kb on + strand, within ECD_02947 at 3092.851 kb on + strand, within ECD_02947 at 3092.967 kb on + strand, within ECD_02947 at 3092.968 kb on - strand, within ECD_02947 at 3093.006 kb on - strand, within ECD_02947 at 3093.045 kb on + strand, within ECD_02947 at 3093.045 kb on + strand, within ECD_02947
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 3,090,850 + ECD_02945 0.69 +0.8 3,090,850 + ECD_02945 0.69 +0.9 3,091,101 + ECD_02945 0.77 +0.5 3,091,184 + ECD_02945 0.80 +0.6 3,091,184 + ECD_02945 0.80 +3.2 3,091,184 + ECD_02945 0.80 +0.5 3,091,185 - ECD_02945 0.80 +1.6 3,091,185 - ECD_02945 0.80 +1.1 3,091,185 - ECD_02945 0.80 -0.7 3,091,320 - ECD_02945 0.84 -0.8 3,091,320 - ECD_02945 0.84 +0.0 3,091,343 + ECD_02945 0.85 -0.8 3,091,375 + ECD_02945 0.86 -0.3 3,091,412 + ECD_02945 0.87 -1.4 3,091,413 - ECD_02945 0.87 +0.4 3,091,435 + ECD_02945 0.88 +0.4 3,091,513 + -0.4 3,091,532 + +1.2 3,091,532 + +0.6 3,091,532 + -0.9 3,091,533 - +0.1 3,091,533 - -0.6 3,091,533 - +0.8 3,091,534 + +0.6 3,091,568 - +1.0 3,091,692 - -1.6 3,091,692 - +0.1 3,091,699 + +1.0 3,091,700 - +0.7 3,091,751 + -1.1 3,091,752 - -1.8 3,091,823 + +0.4 3,091,823 + +0.6 3,091,824 - +0.1 3,091,824 - +0.4 3,091,824 - +0.1 3,091,843 + -0.2 3,091,943 - ECD_02946 0.31 -0.6 3,092,011 + ECD_02946 0.46 -1.0 3,092,337 - -0.4 3,092,337 - -0.0 3,092,468 + ECD_02947 0.11 -1.3 3,092,573 + ECD_02947 0.18 +0.5 3,092,577 - ECD_02947 0.18 +0.2 3,092,585 + ECD_02947 0.19 +0.4 3,092,589 + ECD_02947 0.19 +0.9 3,092,673 + ECD_02947 0.25 +0.1 3,092,673 + ECD_02947 0.25 -0.8 3,092,674 - ECD_02947 0.25 -0.3 3,092,675 + ECD_02947 0.25 +0.6 3,092,675 + ECD_02947 0.25 -0.3 3,092,708 + ECD_02947 0.27 -0.2 3,092,815 - ECD_02947 0.35 +1.1 3,092,831 + ECD_02947 0.36 -0.1 3,092,851 + ECD_02947 0.37 +0.5 3,092,967 + ECD_02947 0.45 -0.2 3,092,968 - ECD_02947 0.45 -1.0 3,093,006 - ECD_02947 0.48 +0.6 3,093,045 + ECD_02947 0.51 +1.9 3,093,045 + ECD_02947 0.51 -0.9
Or see this region's nucleotide sequence