Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02763 and ECD_02764 are separated by 54 nucleotides ECD_02764 and ECD_02765 are separated by 313 nucleotides ECD_02765 and ECD_02766 are separated by 277 nucleotides
ECD_02763: ECD_02763 - putative mannitol-specific PTS IIB and IIC components, at 2,908,329 to 2,909,717
_02763
ECD_02764: ECD_02764 - putative mannitol-specific enzyme IIA component of PTS, at 2,909,772 to 2,910,188
_02764
ECD_02765: ECD_02765 - transketolase 1, thiamine triphosphate-binding, at 2,910,502 to 2,912,493
_02765
ECD_02766: ECD_02766 - Phe-Phe periplasmic metalloprotease, OM lipoprotein; low salt-inducible; Era-binding heat shock protein, at 2,912,771 to 2,913,529
_02766
Position (kb)
2910
2911
2912
2913 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2909.539 kb on - strand, within ECD_02763 at 2909.542 kb on + strand, within ECD_02763 at 2909.547 kb on - strand, within ECD_02763 at 2910.499 kb on + strand at 2910.630 kb on - strand at 2910.707 kb on + strand, within ECD_02765 at 2910.873 kb on - strand, within ECD_02765 at 2910.981 kb on - strand, within ECD_02765 at 2910.981 kb on - strand, within ECD_02765 at 2911.026 kb on + strand, within ECD_02765 at 2911.027 kb on - strand, within ECD_02765 at 2911.027 kb on - strand, within ECD_02765 at 2911.027 kb on - strand, within ECD_02765 at 2911.156 kb on - strand, within ECD_02765 at 2911.160 kb on - strand, within ECD_02765 at 2911.168 kb on - strand, within ECD_02765 at 2911.206 kb on - strand, within ECD_02765 at 2911.275 kb on - strand, within ECD_02765 at 2911.283 kb on + strand, within ECD_02765 at 2911.284 kb on - strand, within ECD_02765 at 2911.284 kb on - strand, within ECD_02765 at 2911.284 kb on - strand, within ECD_02765 at 2911.284 kb on - strand, within ECD_02765 at 2911.314 kb on + strand, within ECD_02765 at 2911.623 kb on - strand, within ECD_02765 at 2911.825 kb on - strand, within ECD_02765 at 2911.936 kb on - strand, within ECD_02765 at 2911.950 kb on - strand, within ECD_02765 at 2912.481 kb on + strand at 2912.482 kb on - strand at 2912.604 kb on + strand at 2912.604 kb on + strand at 2912.604 kb on + strand at 2912.604 kb on + strand at 2912.604 kb on + strand at 2912.604 kb on + strand at 2912.605 kb on - strand at 2912.666 kb on + strand at 2912.667 kb on - strand at 2912.693 kb on + strand at 2912.695 kb on + strand at 2912.743 kb on - strand at 2912.787 kb on + strand at 2912.787 kb on + strand at 2912.833 kb on + strand at 2912.975 kb on + strand, within ECD_02766 at 2912.995 kb on + strand, within ECD_02766 at 2912.995 kb on + strand, within ECD_02766 at 2912.995 kb on + strand, within ECD_02766 at 2912.995 kb on + strand, within ECD_02766 at 2912.996 kb on - strand, within ECD_02766 at 2913.009 kb on + strand, within ECD_02766 at 2913.020 kb on - strand, within ECD_02766 at 2913.020 kb on - strand, within ECD_02766 at 2913.042 kb on - strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.050 kb on + strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.051 kb on - strand, within ECD_02766 at 2913.121 kb on + strand, within ECD_02766 at 2913.122 kb on - strand, within ECD_02766 at 2913.217 kb on + strand, within ECD_02766 at 2913.217 kb on + strand, within ECD_02766 at 2913.218 kb on - strand, within ECD_02766 at 2913.234 kb on + strand, within ECD_02766 at 2913.271 kb on - strand, within ECD_02766 at 2913.359 kb on + strand, within ECD_02766
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 2,909,539 - ECD_02763 0.87 -0.3 2,909,542 + ECD_02763 0.87 +0.4 2,909,547 - ECD_02763 0.88 -0.7 2,910,499 + -0.3 2,910,630 - -1.0 2,910,707 + ECD_02765 0.10 -0.0 2,910,873 - ECD_02765 0.19 -2.2 2,910,981 - ECD_02765 0.24 +0.3 2,910,981 - ECD_02765 0.24 -1.9 2,911,026 + ECD_02765 0.26 -0.5 2,911,027 - ECD_02765 0.26 +0.3 2,911,027 - ECD_02765 0.26 +0.3 2,911,027 - ECD_02765 0.26 +0.0 2,911,156 - ECD_02765 0.33 -0.1 2,911,160 - ECD_02765 0.33 -0.5 2,911,168 - ECD_02765 0.33 -0.3 2,911,206 - ECD_02765 0.35 -0.5 2,911,275 - ECD_02765 0.39 -0.2 2,911,283 + ECD_02765 0.39 -1.4 2,911,284 - ECD_02765 0.39 -1.0 2,911,284 - ECD_02765 0.39 +0.8 2,911,284 - ECD_02765 0.39 -1.6 2,911,284 - ECD_02765 0.39 +0.7 2,911,314 + ECD_02765 0.41 -0.1 2,911,623 - ECD_02765 0.56 +0.8 2,911,825 - ECD_02765 0.66 -1.9 2,911,936 - ECD_02765 0.72 +0.1 2,911,950 - ECD_02765 0.73 +0.3 2,912,481 + -0.1 2,912,482 - +2.4 2,912,604 + -0.5 2,912,604 + +0.1 2,912,604 + -1.5 2,912,604 + -1.8 2,912,604 + -0.5 2,912,604 + -0.1 2,912,605 - +0.8 2,912,666 + +1.0 2,912,667 - -0.8 2,912,693 + -0.2 2,912,695 + +0.7 2,912,743 - -0.8 2,912,787 + -0.0 2,912,787 + -0.3 2,912,833 + -0.3 2,912,975 + ECD_02766 0.27 +1.3 2,912,995 + ECD_02766 0.30 +0.9 2,912,995 + ECD_02766 0.30 +0.7 2,912,995 + ECD_02766 0.30 -0.4 2,912,995 + ECD_02766 0.30 -1.3 2,912,996 - ECD_02766 0.30 +0.6 2,913,009 + ECD_02766 0.31 +2.3 2,913,020 - ECD_02766 0.33 +0.3 2,913,020 - ECD_02766 0.33 -0.1 2,913,042 - ECD_02766 0.36 +0.0 2,913,050 + ECD_02766 0.37 +1.3 2,913,050 + ECD_02766 0.37 -0.7 2,913,050 + ECD_02766 0.37 +0.1 2,913,050 + ECD_02766 0.37 +0.7 2,913,050 + ECD_02766 0.37 -0.0 2,913,050 + ECD_02766 0.37 +0.7 2,913,050 + ECD_02766 0.37 +0.0 2,913,050 + ECD_02766 0.37 +0.3 2,913,050 + ECD_02766 0.37 +0.4 2,913,050 + ECD_02766 0.37 -0.9 2,913,051 - ECD_02766 0.37 -0.8 2,913,051 - ECD_02766 0.37 -0.7 2,913,051 - ECD_02766 0.37 -0.3 2,913,051 - ECD_02766 0.37 -0.1 2,913,051 - ECD_02766 0.37 +0.4 2,913,051 - ECD_02766 0.37 +0.5 2,913,051 - ECD_02766 0.37 +0.0 2,913,121 + ECD_02766 0.46 +1.3 2,913,122 - ECD_02766 0.46 +0.9 2,913,217 + ECD_02766 0.59 +0.7 2,913,217 + ECD_02766 0.59 +0.7 2,913,218 - ECD_02766 0.59 +0.7 2,913,234 + ECD_02766 0.61 +0.3 2,913,271 - ECD_02766 0.66 -0.9 2,913,359 + ECD_02766 0.77 -0.3
Or see this region's nucleotide sequence