Strain Fitness in Escherichia coli BL21 around ECD_02740

Experiment: Bas27

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02739 and ECD_02740 overlap by 4 nucleotidesECD_02740 and ECD_02741 are separated by 25 nucleotidesECD_02741 and ECD_02742 are separated by 167 nucleotides ECD_02739: ECD_02739 - 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding, at 2,883,198 to 2,884,376 _02739 ECD_02740: ECD_02740 - proline aminopeptidase P II, at 2,884,373 to 2,885,698 _02740 ECD_02741: ECD_02741 - UPF0149 family protein, at 2,885,724 to 2,886,302 _02741 ECD_02742: ECD_02742 - FtsZ stabilizer, at 2,886,470 to 2,886,799 _02742 Position (kb) 2884 2885 2886Strain fitness (log2 ratio) -2 -1 0 1at 2884.369 kb on - strandat 2884.484 kb on - strandat 2884.484 kb on - strandat 2884.484 kb on - strandat 2884.537 kb on - strand, within ECD_02740at 2884.537 kb on - strand, within ECD_02740at 2884.537 kb on - strand, within ECD_02740at 2884.640 kb on - strand, within ECD_02740at 2884.652 kb on - strand, within ECD_02740at 2884.652 kb on - strand, within ECD_02740at 2884.652 kb on - strand, within ECD_02740at 2884.786 kb on - strand, within ECD_02740at 2884.828 kb on - strand, within ECD_02740at 2884.894 kb on - strand, within ECD_02740at 2884.903 kb on - strand, within ECD_02740at 2885.009 kb on - strand, within ECD_02740at 2885.011 kb on - strand, within ECD_02740at 2885.011 kb on - strand, within ECD_02740at 2885.011 kb on - strand, within ECD_02740at 2885.071 kb on - strand, within ECD_02740at 2885.290 kb on - strand, within ECD_02740at 2885.290 kb on - strand, within ECD_02740at 2885.290 kb on - strand, within ECD_02740at 2885.290 kb on - strand, within ECD_02740at 2885.290 kb on - strand, within ECD_02740at 2885.290 kb on - strand, within ECD_02740at 2885.314 kb on - strand, within ECD_02740at 2885.418 kb on - strand, within ECD_02740at 2885.699 kb on - strandat 2885.730 kb on + strandat 2885.730 kb on + strandat 2885.731 kb on - strandat 2885.731 kb on - strandat 2885.731 kb on - strandat 2885.731 kb on - strandat 2885.746 kb on - strandat 2885.774 kb on + strandat 2885.775 kb on - strandat 2885.813 kb on - strand, within ECD_02741at 2885.813 kb on - strand, within ECD_02741at 2885.870 kb on - strand, within ECD_02741at 2885.889 kb on - strand, within ECD_02741at 2885.904 kb on - strand, within ECD_02741at 2886.038 kb on - strand, within ECD_02741at 2886.038 kb on - strand, within ECD_02741at 2886.038 kb on - strand, within ECD_02741at 2886.156 kb on + strand, within ECD_02741at 2886.156 kb on + strand, within ECD_02741at 2886.157 kb on - strand, within ECD_02741at 2886.192 kb on + strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.193 kb on - strand, within ECD_02741at 2886.194 kb on - strand, within ECD_02741at 2886.208 kb on - strand, within ECD_02741at 2886.208 kb on - strand, within ECD_02741at 2886.208 kb on - strand, within ECD_02741at 2886.208 kb on - strand, within ECD_02741at 2886.275 kb on - strandat 2886.295 kb on - strandat 2886.295 kb on - strandat 2886.295 kb on - strandat 2886.296 kb on + strandat 2886.297 kb on - strandat 2886.297 kb on - strandat 2886.297 kb on - strandat 2886.297 kb on - strandat 2886.297 kb on - strandat 2886.297 kb on - strandat 2886.297 kb on - strandat 2886.302 kb on + strandat 2886.302 kb on + strandat 2886.302 kb on + strandat 2886.302 kb on + strandat 2886.302 kb on + strandat 2886.302 kb on + strandat 2886.302 kb on + strandat 2886.303 kb on - strandat 2886.303 kb on - strandat 2886.303 kb on - strandat 2886.303 kb on - strandat 2886.303 kb on - strandat 2886.303 kb on - strandat 2886.303 kb on - strandat 2886.329 kb on - strandat 2886.329 kb on - strandat 2886.329 kb on - strandat 2886.329 kb on - strandat 2886.329 kb on - strandat 2886.337 kb on + strandat 2886.338 kb on - strandat 2886.338 kb on - strandat 2886.338 kb on - strandat 2886.342 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.399 kb on + strandat 2886.400 kb on - strandat 2886.604 kb on + strand, within ECD_02742at 2886.604 kb on + strand, within ECD_02742at 2886.616 kb on + strand, within ECD_02742at 2886.656 kb on + strand, within ECD_02742at 2886.657 kb on - strand, within ECD_02742

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas27
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2,884,369 - -1.8
2,884,484 - -2.1
2,884,484 - -1.7
2,884,484 - -1.0
2,884,537 - ECD_02740 0.12 +0.2
2,884,537 - ECD_02740 0.12 -0.4
2,884,537 - ECD_02740 0.12 -0.6
2,884,640 - ECD_02740 0.20 -1.2
2,884,652 - ECD_02740 0.21 +0.4
2,884,652 - ECD_02740 0.21 -2.5
2,884,652 - ECD_02740 0.21 -0.9
2,884,786 - ECD_02740 0.31 -0.9
2,884,828 - ECD_02740 0.34 +0.2
2,884,894 - ECD_02740 0.39 +0.3
2,884,903 - ECD_02740 0.40 -1.0
2,885,009 - ECD_02740 0.48 -0.4
2,885,011 - ECD_02740 0.48 -1.4
2,885,011 - ECD_02740 0.48 -1.7
2,885,011 - ECD_02740 0.48 -0.7
2,885,071 - ECD_02740 0.53 -0.9
2,885,290 - ECD_02740 0.69 -0.5
2,885,290 - ECD_02740 0.69 -2.2
2,885,290 - ECD_02740 0.69 -0.3
2,885,290 - ECD_02740 0.69 -0.2
2,885,290 - ECD_02740 0.69 -0.7
2,885,290 - ECD_02740 0.69 -1.1
2,885,314 - ECD_02740 0.71 -0.7
2,885,418 - ECD_02740 0.79 -0.9
2,885,699 - -0.7
2,885,730 + -1.0
2,885,730 + -1.1
2,885,731 - -0.3
2,885,731 - +0.2
2,885,731 - +0.5
2,885,731 - +0.4
2,885,746 - -0.3
2,885,774 + +1.1
2,885,775 - -0.2
2,885,813 - ECD_02741 0.15 -0.2
2,885,813 - ECD_02741 0.15 +0.0
2,885,870 - ECD_02741 0.25 +0.6
2,885,889 - ECD_02741 0.28 -0.3
2,885,904 - ECD_02741 0.31 +0.4
2,886,038 - ECD_02741 0.54 +0.2
2,886,038 - ECD_02741 0.54 -0.2
2,886,038 - ECD_02741 0.54 -1.1
2,886,156 + ECD_02741 0.75 +0.6
2,886,156 + ECD_02741 0.75 -2.2
2,886,157 - ECD_02741 0.75 -0.4
2,886,192 + ECD_02741 0.81 -1.2
2,886,193 - ECD_02741 0.81 -0.0
2,886,193 - ECD_02741 0.81 +1.3
2,886,193 - ECD_02741 0.81 -0.0
2,886,193 - ECD_02741 0.81 -0.3
2,886,193 - ECD_02741 0.81 +0.1
2,886,193 - ECD_02741 0.81 -0.4
2,886,193 - ECD_02741 0.81 +1.5
2,886,193 - ECD_02741 0.81 +0.0
2,886,193 - ECD_02741 0.81 +0.5
2,886,194 - ECD_02741 0.81 +0.1
2,886,208 - ECD_02741 0.84 +0.3
2,886,208 - ECD_02741 0.84 +1.0
2,886,208 - ECD_02741 0.84 +0.2
2,886,208 - ECD_02741 0.84 +0.5
2,886,275 - -0.5
2,886,295 - -0.0
2,886,295 - -0.4
2,886,295 - -1.8
2,886,296 + -0.6
2,886,297 - +0.5
2,886,297 - +0.1
2,886,297 - +0.6
2,886,297 - -0.5
2,886,297 - +0.6
2,886,297 - +0.2
2,886,297 - +0.5
2,886,302 + -0.5
2,886,302 + -0.3
2,886,302 + -0.7
2,886,302 + -0.4
2,886,302 + +0.2
2,886,302 + +0.0
2,886,302 + -0.8
2,886,303 - +0.6
2,886,303 - -1.0
2,886,303 - -0.7
2,886,303 - -0.0
2,886,303 - +1.0
2,886,303 - +0.7
2,886,303 - -0.9
2,886,329 - -0.1
2,886,329 - -0.1
2,886,329 - +1.3
2,886,329 - -0.2
2,886,329 - -0.4
2,886,337 + -0.5
2,886,338 - -1.5
2,886,338 - -0.2
2,886,338 - -0.5
2,886,342 + -0.3
2,886,399 + -0.1
2,886,399 + -1.6
2,886,399 + -0.9
2,886,399 + -0.9
2,886,399 + -0.7
2,886,399 + -0.9
2,886,399 + +0.3
2,886,399 + -2.1
2,886,400 - +1.1
2,886,604 + ECD_02742 0.41 -0.2
2,886,604 + ECD_02742 0.41 -1.0
2,886,616 + ECD_02742 0.44 +0.8
2,886,656 + ECD_02742 0.56 -0.5
2,886,657 - ECD_02742 0.57 -0.7

Or see this region's nucleotide sequence