Strain Fitness in Escherichia coli BL21 around ECD_02738

Experiment: Bas27

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02737 and ECD_02738 are separated by 446 nucleotidesECD_02738 and ECD_02739 are separated by 22 nucleotides ECD_02737: ECD_02737 - aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex, at 2,880,432 to 2,881,526 _02737 ECD_02738: ECD_02738 - 2-octaprenylphenol hydroxylase, FAD-dependent, at 2,881,973 to 2,883,175 _02738 ECD_02739: ECD_02739 - 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding, at 2,883,198 to 2,884,376 _02739 Position (kb) 2881 2882 2883 2884Strain fitness (log2 ratio) -2 -1 0 1 2at 2881.046 kb on + strand, within ECD_02737at 2881.047 kb on - strand, within ECD_02737at 2881.047 kb on - strand, within ECD_02737at 2881.047 kb on - strand, within ECD_02737at 2881.188 kb on - strand, within ECD_02737at 2881.223 kb on - strand, within ECD_02737at 2881.239 kb on + strand, within ECD_02737at 2881.373 kb on + strand, within ECD_02737at 2881.373 kb on + strand, within ECD_02737at 2881.373 kb on + strand, within ECD_02737at 2881.373 kb on + strand, within ECD_02737at 2881.374 kb on - strand, within ECD_02737at 2881.374 kb on - strand, within ECD_02737at 2881.374 kb on - strand, within ECD_02737at 2881.403 kb on + strand, within ECD_02737at 2881.403 kb on + strand, within ECD_02737at 2881.404 kb on - strand, within ECD_02737at 2881.404 kb on - strand, within ECD_02737at 2881.408 kb on - strand, within ECD_02737at 2881.438 kb on + strandat 2881.504 kb on + strandat 2881.504 kb on + strandat 2881.505 kb on - strandat 2881.505 kb on - strandat 2881.543 kb on - strandat 2881.543 kb on - strandat 2881.669 kb on - strandat 2881.674 kb on - strandat 2882.128 kb on + strand, within ECD_02738at 2882.184 kb on + strand, within ECD_02738at 2882.184 kb on + strand, within ECD_02738at 2882.185 kb on - strand, within ECD_02738at 2882.257 kb on + strand, within ECD_02738at 2882.629 kb on - strand, within ECD_02738at 2883.111 kb on - strandat 2883.159 kb on - strandat 2883.159 kb on - strandat 2883.180 kb on + strandat 2883.181 kb on - strandat 2883.256 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas27
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2,881,046 + ECD_02737 0.56 +0.0
2,881,047 - ECD_02737 0.56 +0.3
2,881,047 - ECD_02737 0.56 -1.4
2,881,047 - ECD_02737 0.56 +0.5
2,881,188 - ECD_02737 0.69 -0.4
2,881,223 - ECD_02737 0.72 +2.3
2,881,239 + ECD_02737 0.74 +0.4
2,881,373 + ECD_02737 0.86 -0.6
2,881,373 + ECD_02737 0.86 +0.6
2,881,373 + ECD_02737 0.86 -1.1
2,881,373 + ECD_02737 0.86 -0.3
2,881,374 - ECD_02737 0.86 +0.3
2,881,374 - ECD_02737 0.86 -0.2
2,881,374 - ECD_02737 0.86 -0.2
2,881,403 + ECD_02737 0.89 -1.3
2,881,403 + ECD_02737 0.89 -0.1
2,881,404 - ECD_02737 0.89 -0.1
2,881,404 - ECD_02737 0.89 -0.5
2,881,408 - ECD_02737 0.89 -1.5
2,881,438 + +0.9
2,881,504 + +0.9
2,881,504 + +0.7
2,881,505 - -0.6
2,881,505 - -0.4
2,881,543 - +0.5
2,881,543 - +0.5
2,881,669 - +1.2
2,881,674 - +0.5
2,882,128 + ECD_02738 0.13 +0.6
2,882,184 + ECD_02738 0.18 +0.6
2,882,184 + ECD_02738 0.18 +0.2
2,882,185 - ECD_02738 0.18 -0.6
2,882,257 + ECD_02738 0.24 +0.1
2,882,629 - ECD_02738 0.55 -2.0
2,883,111 - -1.2
2,883,159 - +1.1
2,883,159 - -1.2
2,883,180 + -0.8
2,883,181 - +0.1
2,883,256 - -1.0

Or see this region's nucleotide sequence