Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02737 and ECD_02738 are separated by 446 nucleotides ECD_02738 and ECD_02739 are separated by 22 nucleotides
ECD_02737: ECD_02737 - aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex, at 2,880,432 to 2,881,526
_02737
ECD_02738: ECD_02738 - 2-octaprenylphenol hydroxylase, FAD-dependent, at 2,881,973 to 2,883,175
_02738
ECD_02739: ECD_02739 - 2-octaprenyl-6-methoxyphenol hydroxylase, FAD/NAD(P)-binding, at 2,883,198 to 2,884,376
_02739
Position (kb)
2881
2882
2883
2884 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2881.046 kb on + strand, within ECD_02737 at 2881.047 kb on - strand, within ECD_02737 at 2881.047 kb on - strand, within ECD_02737 at 2881.047 kb on - strand, within ECD_02737 at 2881.188 kb on - strand, within ECD_02737 at 2881.223 kb on - strand, within ECD_02737 at 2881.239 kb on + strand, within ECD_02737 at 2881.373 kb on + strand, within ECD_02737 at 2881.373 kb on + strand, within ECD_02737 at 2881.373 kb on + strand, within ECD_02737 at 2881.373 kb on + strand, within ECD_02737 at 2881.374 kb on - strand, within ECD_02737 at 2881.374 kb on - strand, within ECD_02737 at 2881.374 kb on - strand, within ECD_02737 at 2881.403 kb on + strand, within ECD_02737 at 2881.403 kb on + strand, within ECD_02737 at 2881.404 kb on - strand, within ECD_02737 at 2881.404 kb on - strand, within ECD_02737 at 2881.408 kb on - strand, within ECD_02737 at 2881.438 kb on + strand at 2881.504 kb on + strand at 2881.504 kb on + strand at 2881.505 kb on - strand at 2881.505 kb on - strand at 2881.543 kb on - strand at 2881.543 kb on - strand at 2881.669 kb on - strand at 2881.674 kb on - strand at 2882.128 kb on + strand, within ECD_02738 at 2882.184 kb on + strand, within ECD_02738 at 2882.184 kb on + strand, within ECD_02738 at 2882.185 kb on - strand, within ECD_02738 at 2882.257 kb on + strand, within ECD_02738 at 2882.629 kb on - strand, within ECD_02738 at 2883.111 kb on - strand at 2883.159 kb on - strand at 2883.159 kb on - strand at 2883.180 kb on + strand at 2883.181 kb on - strand at 2883.256 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 2,881,046 + ECD_02737 0.56 +0.0 2,881,047 - ECD_02737 0.56 +0.3 2,881,047 - ECD_02737 0.56 -1.4 2,881,047 - ECD_02737 0.56 +0.5 2,881,188 - ECD_02737 0.69 -0.4 2,881,223 - ECD_02737 0.72 +2.3 2,881,239 + ECD_02737 0.74 +0.4 2,881,373 + ECD_02737 0.86 -0.6 2,881,373 + ECD_02737 0.86 +0.6 2,881,373 + ECD_02737 0.86 -1.1 2,881,373 + ECD_02737 0.86 -0.3 2,881,374 - ECD_02737 0.86 +0.3 2,881,374 - ECD_02737 0.86 -0.2 2,881,374 - ECD_02737 0.86 -0.2 2,881,403 + ECD_02737 0.89 -1.3 2,881,403 + ECD_02737 0.89 -0.1 2,881,404 - ECD_02737 0.89 -0.1 2,881,404 - ECD_02737 0.89 -0.5 2,881,408 - ECD_02737 0.89 -1.5 2,881,438 + +0.9 2,881,504 + +0.9 2,881,504 + +0.7 2,881,505 - -0.6 2,881,505 - -0.4 2,881,543 - +0.5 2,881,543 - +0.5 2,881,669 - +1.2 2,881,674 - +0.5 2,882,128 + ECD_02738 0.13 +0.6 2,882,184 + ECD_02738 0.18 +0.6 2,882,184 + ECD_02738 0.18 +0.2 2,882,185 - ECD_02738 0.18 -0.6 2,882,257 + ECD_02738 0.24 +0.1 2,882,629 - ECD_02738 0.55 -2.0 2,883,111 - -1.2 2,883,159 - +1.1 2,883,159 - -1.2 2,883,180 + -0.8 2,883,181 - +0.1 2,883,256 - -1.0
Or see this region's nucleotide sequence