Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02727 and ECD_02728 are separated by 39 nucleotides ECD_02728 and ECD_02729 overlap by 20 nucleotides ECD_02729 and ECD_02730 are separated by 242 nucleotides
ECD_02727: ECD_02727 - flavodoxin 2, at 2,870,715 to 2,871,236
_02727
ECD_02728: ECD_02728 - toxin of CptAB toxin-antitoxin pair, at 2,871,276 to 2,871,683
_02728
ECD_02729: ECD_02729 - flavinator of succinate dehydrogenase; antitoxin of CptAB toxin-antitoxin pair, at 2,871,664 to 2,871,930
_02729
ECD_02730: ECD_02730 - iron-sulfur cluster repair protein, plumbagin resistance, at 2,872,173 to 2,873,153
_02730
Position (kb)
2871
2872 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2870.671 kb on + strand at 2870.671 kb on + strand at 2870.671 kb on + strand at 2870.676 kb on + strand at 2870.676 kb on + strand at 2870.677 kb on - strand at 2870.677 kb on - strand at 2870.677 kb on - strand at 2870.677 kb on - strand at 2870.709 kb on + strand at 2870.709 kb on + strand at 2870.709 kb on + strand at 2870.709 kb on + strand at 2870.709 kb on + strand at 2870.710 kb on - strand at 2870.710 kb on - strand at 2870.710 kb on - strand at 2870.710 kb on - strand at 2870.710 kb on - strand at 2870.710 kb on - strand at 2870.710 kb on - strand at 2870.710 kb on - strand at 2870.710 kb on - strand at 2870.710 kb on - strand at 2870.710 kb on - strand at 2870.714 kb on + strand at 2870.733 kb on + strand at 2870.751 kb on + strand at 2870.751 kb on + strand at 2870.809 kb on + strand, within ECD_02727 at 2870.809 kb on + strand, within ECD_02727 at 2870.809 kb on + strand, within ECD_02727 at 2870.809 kb on + strand, within ECD_02727 at 2870.809 kb on + strand, within ECD_02727 at 2870.809 kb on + strand, within ECD_02727 at 2870.809 kb on + strand, within ECD_02727 at 2870.809 kb on + strand, within ECD_02727 at 2870.809 kb on + strand, within ECD_02727 at 2870.809 kb on + strand, within ECD_02727 at 2870.809 kb on + strand, within ECD_02727 at 2870.809 kb on + strand, within ECD_02727 at 2870.809 kb on + strand, within ECD_02727 at 2870.810 kb on - strand, within ECD_02727 at 2870.810 kb on - strand, within ECD_02727 at 2870.810 kb on - strand, within ECD_02727 at 2870.810 kb on - strand, within ECD_02727 at 2870.810 kb on - strand, within ECD_02727 at 2870.839 kb on + strand, within ECD_02727 at 2870.850 kb on + strand, within ECD_02727 at 2870.851 kb on - strand, within ECD_02727 at 2870.967 kb on + strand, within ECD_02727 at 2870.968 kb on - strand, within ECD_02727 at 2871.092 kb on + strand, within ECD_02727 at 2871.155 kb on + strand, within ECD_02727 at 2871.155 kb on + strand, within ECD_02727 at 2871.162 kb on + strand, within ECD_02727 at 2871.162 kb on + strand, within ECD_02727 at 2871.183 kb on - strand, within ECD_02727 at 2871.183 kb on - strand, within ECD_02727 at 2871.183 kb on - strand, within ECD_02727 at 2871.228 kb on + strand at 2871.228 kb on + strand at 2871.228 kb on + strand at 2871.229 kb on - strand at 2871.229 kb on - strand at 2871.229 kb on - strand at 2871.251 kb on + strand at 2871.258 kb on + strand at 2871.258 kb on + strand at 2871.258 kb on + strand at 2871.258 kb on + strand at 2871.259 kb on - strand at 2871.259 kb on - strand at 2871.259 kb on - strand at 2871.312 kb on + strand at 2871.357 kb on + strand, within ECD_02728 at 2871.388 kb on - strand, within ECD_02728 at 2871.388 kb on - strand, within ECD_02728 at 2871.410 kb on + strand, within ECD_02728 at 2871.411 kb on - strand, within ECD_02728 at 2871.411 kb on - strand, within ECD_02728 at 2871.411 kb on - strand, within ECD_02728 at 2871.483 kb on - strand, within ECD_02728 at 2871.503 kb on + strand, within ECD_02728 at 2871.503 kb on + strand, within ECD_02728 at 2871.504 kb on - strand, within ECD_02728 at 2871.504 kb on - strand, within ECD_02728 at 2871.504 kb on - strand, within ECD_02728 at 2871.504 kb on - strand, within ECD_02728 at 2871.506 kb on + strand, within ECD_02728 at 2871.507 kb on - strand, within ECD_02728 at 2871.549 kb on + strand, within ECD_02728 at 2871.549 kb on + strand, within ECD_02728 at 2871.550 kb on - strand, within ECD_02728 at 2871.571 kb on + strand, within ECD_02728 at 2871.572 kb on - strand, within ECD_02728 at 2871.572 kb on - strand, within ECD_02728 at 2871.572 kb on - strand, within ECD_02728 at 2871.572 kb on - strand, within ECD_02728 at 2871.572 kb on - strand, within ECD_02728 at 2871.599 kb on + strand, within ECD_02728 at 2871.744 kb on + strand, within ECD_02729 at 2871.765 kb on + strand, within ECD_02729 at 2871.836 kb on + strand, within ECD_02729 at 2871.837 kb on - strand, within ECD_02729 at 2871.837 kb on - strand, within ECD_02729 at 2871.882 kb on + strand, within ECD_02729 at 2871.966 kb on - strand at 2871.966 kb on - strand at 2871.970 kb on + strand at 2871.970 kb on + strand at 2871.970 kb on + strand at 2871.971 kb on - strand at 2871.971 kb on - strand at 2871.971 kb on - strand at 2871.971 kb on - strand at 2872.001 kb on - strand at 2872.119 kb on + strand at 2872.119 kb on + strand at 2872.119 kb on + strand at 2872.119 kb on + strand at 2872.119 kb on + strand at 2872.128 kb on + strand at 2872.141 kb on + strand at 2872.144 kb on + strand at 2872.144 kb on + strand at 2872.144 kb on + strand at 2872.144 kb on + strand at 2872.144 kb on + strand at 2872.169 kb on + strand at 2872.169 kb on + strand at 2872.169 kb on + strand at 2872.169 kb on + strand at 2872.169 kb on + strand at 2872.169 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 2,870,671 + +1.1 2,870,671 + -2.2 2,870,671 + +0.4 2,870,676 + +0.5 2,870,676 + -1.6 2,870,677 - +1.1 2,870,677 - +0.4 2,870,677 - -0.2 2,870,677 - -0.1 2,870,709 + -1.4 2,870,709 + -1.4 2,870,709 + +0.4 2,870,709 + +0.5 2,870,709 + -0.5 2,870,710 - +0.1 2,870,710 - +0.2 2,870,710 - -1.5 2,870,710 - +0.1 2,870,710 - +0.7 2,870,710 - +0.6 2,870,710 - -0.8 2,870,710 - -0.1 2,870,710 - +0.6 2,870,710 - -0.3 2,870,710 - -0.6 2,870,714 + -1.1 2,870,733 + -1.7 2,870,751 + -1.2 2,870,751 + -0.8 2,870,809 + ECD_02727 0.18 +0.1 2,870,809 + ECD_02727 0.18 -0.4 2,870,809 + ECD_02727 0.18 -1.5 2,870,809 + ECD_02727 0.18 +0.2 2,870,809 + ECD_02727 0.18 +0.1 2,870,809 + ECD_02727 0.18 -0.7 2,870,809 + ECD_02727 0.18 +2.0 2,870,809 + ECD_02727 0.18 +0.4 2,870,809 + ECD_02727 0.18 -0.3 2,870,809 + ECD_02727 0.18 -0.5 2,870,809 + ECD_02727 0.18 -1.3 2,870,809 + ECD_02727 0.18 -0.3 2,870,809 + ECD_02727 0.18 -2.6 2,870,810 - ECD_02727 0.18 -0.3 2,870,810 - ECD_02727 0.18 +0.7 2,870,810 - ECD_02727 0.18 -0.9 2,870,810 - ECD_02727 0.18 -0.2 2,870,810 - ECD_02727 0.18 +1.3 2,870,839 + ECD_02727 0.24 -0.7 2,870,850 + ECD_02727 0.26 +0.6 2,870,851 - ECD_02727 0.26 -0.1 2,870,967 + ECD_02727 0.48 +1.1 2,870,968 - ECD_02727 0.48 -0.5 2,871,092 + ECD_02727 0.72 +0.4 2,871,155 + ECD_02727 0.84 -1.9 2,871,155 + ECD_02727 0.84 +0.4 2,871,162 + ECD_02727 0.86 -0.2 2,871,162 + ECD_02727 0.86 -0.1 2,871,183 - ECD_02727 0.90 +0.8 2,871,183 - ECD_02727 0.90 -0.6 2,871,183 - ECD_02727 0.90 +0.2 2,871,228 + -1.1 2,871,228 + -0.6 2,871,228 + +0.2 2,871,229 - +0.5 2,871,229 - -1.4 2,871,229 - +0.3 2,871,251 + -0.5 2,871,258 + +0.6 2,871,258 + -0.0 2,871,258 + -0.5 2,871,258 + -0.3 2,871,259 - -0.6 2,871,259 - +0.2 2,871,259 - -0.0 2,871,312 + +0.3 2,871,357 + ECD_02728 0.20 -0.4 2,871,388 - ECD_02728 0.27 -1.4 2,871,388 - ECD_02728 0.27 +0.9 2,871,410 + ECD_02728 0.33 -1.0 2,871,411 - ECD_02728 0.33 +1.1 2,871,411 - ECD_02728 0.33 +0.2 2,871,411 - ECD_02728 0.33 -0.4 2,871,483 - ECD_02728 0.51 +0.0 2,871,503 + ECD_02728 0.56 -0.7 2,871,503 + ECD_02728 0.56 +0.3 2,871,504 - ECD_02728 0.56 -1.2 2,871,504 - ECD_02728 0.56 +0.0 2,871,504 - ECD_02728 0.56 +0.6 2,871,504 - ECD_02728 0.56 -0.4 2,871,506 + ECD_02728 0.56 -1.7 2,871,507 - ECD_02728 0.57 +0.0 2,871,549 + ECD_02728 0.67 -0.3 2,871,549 + ECD_02728 0.67 -1.2 2,871,550 - ECD_02728 0.67 -2.5 2,871,571 + ECD_02728 0.72 -0.3 2,871,572 - ECD_02728 0.73 +1.6 2,871,572 - ECD_02728 0.73 +0.1 2,871,572 - ECD_02728 0.73 +0.8 2,871,572 - ECD_02728 0.73 +0.6 2,871,572 - ECD_02728 0.73 -0.4 2,871,599 + ECD_02728 0.79 -0.9 2,871,744 + ECD_02729 0.30 +0.2 2,871,765 + ECD_02729 0.38 -0.1 2,871,836 + ECD_02729 0.64 -0.9 2,871,837 - ECD_02729 0.65 -2.2 2,871,837 - ECD_02729 0.65 -0.7 2,871,882 + ECD_02729 0.82 +0.5 2,871,966 - +0.2 2,871,966 - -0.6 2,871,970 + +0.2 2,871,970 + -0.4 2,871,970 + -0.3 2,871,971 - +0.1 2,871,971 - -0.9 2,871,971 - -0.8 2,871,971 - +1.1 2,872,001 - -0.4 2,872,119 + +0.5 2,872,119 + +1.2 2,872,119 + -0.4 2,872,119 + +0.1 2,872,119 + +1.1 2,872,128 + -0.1 2,872,141 + +0.0 2,872,144 + -0.7 2,872,144 + -0.1 2,872,144 + -0.2 2,872,144 + -0.8 2,872,144 + +0.2 2,872,169 + -0.4 2,872,169 + -0.0 2,872,169 + -0.4 2,872,169 + -0.2 2,872,169 + -1.3 2,872,169 + -1.1
Or see this region's nucleotide sequence