Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02723 and ECD_02724 are separated by 90 nucleotides ECD_02724 and ECD_02725 are separated by 5 nucleotides ECD_02725 and ECD_02726 are separated by 24 nucleotides
ECD_02723: ECD_02723 - peptide chain release factor RF-2, at 2,866,044 to 2,867,142
_02723
ECD_02724: ECD_02724 - ssDNA exonuclease, 5, at 2,867,233 to 2,868,966
_02724
ECD_02725: ECD_02725 - protein disulfide isomerase II, at 2,868,972 to 2,869,682
_02725
ECD_02726: ECD_02726 - site-specific tyrosine recombinase, at 2,869,707 to 2,870,603
_02726
Position (kb)
2867
2868
2869 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2867.183 kb on - strand at 2867.183 kb on - strand at 2867.183 kb on - strand at 2867.183 kb on - strand at 2867.247 kb on + strand at 2867.248 kb on - strand at 2867.304 kb on + strand at 2867.304 kb on + strand at 2867.304 kb on + strand at 2867.306 kb on + strand at 2867.306 kb on + strand at 2867.307 kb on - strand at 2867.361 kb on + strand at 2867.608 kb on - strand, within ECD_02724 at 2867.699 kb on - strand, within ECD_02724 at 2867.711 kb on + strand, within ECD_02724 at 2867.711 kb on + strand, within ECD_02724 at 2867.711 kb on + strand, within ECD_02724 at 2867.711 kb on + strand, within ECD_02724 at 2867.712 kb on - strand, within ECD_02724 at 2867.712 kb on - strand, within ECD_02724 at 2867.712 kb on - strand, within ECD_02724 at 2867.745 kb on + strand, within ECD_02724 at 2867.746 kb on - strand, within ECD_02724 at 2867.746 kb on - strand, within ECD_02724 at 2867.746 kb on - strand, within ECD_02724 at 2867.746 kb on - strand, within ECD_02724 at 2867.746 kb on - strand, within ECD_02724 at 2867.746 kb on - strand, within ECD_02724 at 2867.885 kb on + strand, within ECD_02724 at 2867.885 kb on + strand, within ECD_02724 at 2867.885 kb on + strand, within ECD_02724 at 2867.885 kb on + strand, within ECD_02724 at 2867.885 kb on + strand, within ECD_02724 at 2867.885 kb on + strand, within ECD_02724 at 2867.885 kb on + strand, within ECD_02724 at 2867.886 kb on - strand, within ECD_02724 at 2867.886 kb on - strand, within ECD_02724 at 2867.886 kb on - strand, within ECD_02724 at 2867.886 kb on - strand, within ECD_02724 at 2867.886 kb on - strand, within ECD_02724 at 2867.886 kb on - strand, within ECD_02724 at 2868.070 kb on - strand, within ECD_02724 at 2868.070 kb on - strand, within ECD_02724 at 2868.070 kb on - strand, within ECD_02724 at 2868.070 kb on - strand, within ECD_02724 at 2868.119 kb on - strand, within ECD_02724 at 2868.175 kb on - strand, within ECD_02724 at 2868.237 kb on + strand, within ECD_02724 at 2868.237 kb on + strand, within ECD_02724 at 2868.237 kb on + strand, within ECD_02724 at 2868.240 kb on + strand, within ECD_02724 at 2868.241 kb on - strand, within ECD_02724 at 2868.420 kb on + strand, within ECD_02724 at 2868.436 kb on - strand, within ECD_02724 at 2868.549 kb on + strand, within ECD_02724 at 2868.549 kb on + strand, within ECD_02724 at 2868.550 kb on - strand, within ECD_02724 at 2868.550 kb on - strand, within ECD_02724 at 2868.571 kb on + strand, within ECD_02724 at 2868.572 kb on - strand, within ECD_02724 at 2868.572 kb on - strand, within ECD_02724 at 2868.617 kb on - strand, within ECD_02724 at 2868.653 kb on + strand, within ECD_02724 at 2868.653 kb on + strand, within ECD_02724 at 2868.653 kb on + strand, within ECD_02724 at 2868.653 kb on + strand, within ECD_02724 at 2868.654 kb on - strand, within ECD_02724 at 2868.654 kb on - strand, within ECD_02724 at 2868.773 kb on + strand, within ECD_02724 at 2868.773 kb on + strand, within ECD_02724 at 2868.774 kb on - strand, within ECD_02724 at 2868.774 kb on - strand, within ECD_02724 at 2868.774 kb on - strand, within ECD_02724 at 2868.774 kb on - strand, within ECD_02724 at 2868.825 kb on + strand at 2868.825 kb on + strand at 2868.825 kb on + strand at 2868.825 kb on + strand at 2868.825 kb on + strand at 2868.826 kb on - strand at 2868.826 kb on - strand at 2868.826 kb on - strand at 2868.826 kb on - strand at 2868.832 kb on - strand at 2868.879 kb on - strand at 2868.879 kb on - strand at 2868.881 kb on - strand at 2868.881 kb on - strand at 2868.953 kb on - strand at 2868.953 kb on - strand at 2868.953 kb on - strand at 2868.953 kb on - strand at 2868.953 kb on - strand at 2868.953 kb on - strand at 2868.973 kb on + strand at 2868.974 kb on - strand at 2868.974 kb on - strand at 2868.977 kb on + strand at 2869.108 kb on - strand, within ECD_02725 at 2869.108 kb on - strand, within ECD_02725 at 2869.111 kb on + strand, within ECD_02725 at 2869.111 kb on + strand, within ECD_02725 at 2869.158 kb on - strand, within ECD_02725 at 2869.158 kb on - strand, within ECD_02725 at 2869.208 kb on + strand, within ECD_02725 at 2869.208 kb on + strand, within ECD_02725 at 2869.208 kb on + strand, within ECD_02725 at 2869.209 kb on - strand, within ECD_02725 at 2869.209 kb on - strand, within ECD_02725 at 2869.290 kb on - strand, within ECD_02725 at 2869.291 kb on + strand, within ECD_02725 at 2869.291 kb on + strand, within ECD_02725 at 2869.292 kb on - strand, within ECD_02725 at 2869.292 kb on - strand, within ECD_02725 at 2869.292 kb on - strand, within ECD_02725 at 2869.292 kb on - strand, within ECD_02725 at 2869.334 kb on + strand, within ECD_02725 at 2869.335 kb on - strand, within ECD_02725 at 2869.335 kb on - strand, within ECD_02725 at 2869.335 kb on - strand, within ECD_02725 at 2869.335 kb on - strand, within ECD_02725 at 2869.335 kb on - strand, within ECD_02725 at 2869.335 kb on - strand, within ECD_02725 at 2869.338 kb on - strand, within ECD_02725 at 2869.344 kb on - strand, within ECD_02725 at 2869.379 kb on + strand, within ECD_02725 at 2869.420 kb on - strand, within ECD_02725 at 2869.420 kb on - strand, within ECD_02725 at 2869.461 kb on - strand, within ECD_02725 at 2869.468 kb on + strand, within ECD_02725 at 2869.468 kb on + strand, within ECD_02725 at 2869.468 kb on + strand, within ECD_02725 at 2869.469 kb on - strand, within ECD_02725 at 2869.469 kb on - strand, within ECD_02725 at 2869.469 kb on - strand, within ECD_02725 at 2869.469 kb on - strand, within ECD_02725 at 2869.469 kb on - strand, within ECD_02725 at 2869.469 kb on - strand, within ECD_02725 at 2869.469 kb on - strand, within ECD_02725 at 2869.487 kb on + strand, within ECD_02725 at 2869.487 kb on + strand, within ECD_02725 at 2869.487 kb on + strand, within ECD_02725 at 2869.488 kb on - strand, within ECD_02725 at 2869.488 kb on - strand, within ECD_02725 at 2869.488 kb on - strand, within ECD_02725 at 2869.488 kb on - strand, within ECD_02725 at 2869.488 kb on - strand, within ECD_02725 at 2869.488 kb on - strand, within ECD_02725 at 2869.488 kb on - strand, within ECD_02725 at 2869.488 kb on - strand, within ECD_02725 at 2869.493 kb on + strand, within ECD_02725 at 2869.493 kb on + strand, within ECD_02725 at 2869.510 kb on + strand, within ECD_02725 at 2869.510 kb on + strand, within ECD_02725 at 2869.510 kb on + strand, within ECD_02725 at 2869.511 kb on - strand, within ECD_02725 at 2869.511 kb on - strand, within ECD_02725 at 2869.511 kb on - strand, within ECD_02725 at 2869.511 kb on - strand, within ECD_02725 at 2869.552 kb on - strand, within ECD_02725 at 2869.667 kb on + strand at 2869.667 kb on + strand at 2869.668 kb on - strand at 2869.682 kb on + strand at 2869.766 kb on + strand at 2869.767 kb on - strand at 2869.767 kb on - strand at 2869.822 kb on - strand, within ECD_02726 at 2869.839 kb on + strand, within ECD_02726 at 2869.842 kb on + strand, within ECD_02726 at 2869.916 kb on - strand, within ECD_02726
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 2,867,183 - +0.5 2,867,183 - +0.1 2,867,183 - +0.2 2,867,183 - +0.9 2,867,247 + -1.5 2,867,248 - -0.2 2,867,304 + -1.0 2,867,304 + -1.5 2,867,304 + +1.6 2,867,306 + -0.5 2,867,306 + -1.0 2,867,307 - -2.4 2,867,361 + +0.4 2,867,608 - ECD_02724 0.22 -0.8 2,867,699 - ECD_02724 0.27 +0.1 2,867,711 + ECD_02724 0.28 -1.3 2,867,711 + ECD_02724 0.28 +1.1 2,867,711 + ECD_02724 0.28 -0.0 2,867,711 + ECD_02724 0.28 -2.2 2,867,712 - ECD_02724 0.28 -0.3 2,867,712 - ECD_02724 0.28 +0.9 2,867,712 - ECD_02724 0.28 -1.3 2,867,745 + ECD_02724 0.30 +1.4 2,867,746 - ECD_02724 0.30 -0.0 2,867,746 - ECD_02724 0.30 +0.7 2,867,746 - ECD_02724 0.30 +0.3 2,867,746 - ECD_02724 0.30 -0.1 2,867,746 - ECD_02724 0.30 -0.5 2,867,746 - ECD_02724 0.30 -0.3 2,867,885 + ECD_02724 0.38 +0.0 2,867,885 + ECD_02724 0.38 -0.7 2,867,885 + ECD_02724 0.38 -0.2 2,867,885 + ECD_02724 0.38 -1.9 2,867,885 + ECD_02724 0.38 -0.6 2,867,885 + ECD_02724 0.38 -0.2 2,867,885 + ECD_02724 0.38 -1.6 2,867,886 - ECD_02724 0.38 -1.4 2,867,886 - ECD_02724 0.38 +0.4 2,867,886 - ECD_02724 0.38 -0.2 2,867,886 - ECD_02724 0.38 -1.6 2,867,886 - ECD_02724 0.38 +0.0 2,867,886 - ECD_02724 0.38 -0.8 2,868,070 - ECD_02724 0.48 -1.2 2,868,070 - ECD_02724 0.48 -1.1 2,868,070 - ECD_02724 0.48 -1.5 2,868,070 - ECD_02724 0.48 -2.3 2,868,119 - ECD_02724 0.51 -0.0 2,868,175 - ECD_02724 0.54 -1.8 2,868,237 + ECD_02724 0.58 -0.0 2,868,237 + ECD_02724 0.58 +0.0 2,868,237 + ECD_02724 0.58 -0.4 2,868,240 + ECD_02724 0.58 -1.3 2,868,241 - ECD_02724 0.58 -0.6 2,868,420 + ECD_02724 0.68 -1.6 2,868,436 - ECD_02724 0.69 -0.6 2,868,549 + ECD_02724 0.76 -1.0 2,868,549 + ECD_02724 0.76 -0.2 2,868,550 - ECD_02724 0.76 -1.1 2,868,550 - ECD_02724 0.76 -0.4 2,868,571 + ECD_02724 0.77 -1.3 2,868,572 - ECD_02724 0.77 -2.5 2,868,572 - ECD_02724 0.77 -0.0 2,868,617 - ECD_02724 0.80 +1.1 2,868,653 + ECD_02724 0.82 +0.6 2,868,653 + ECD_02724 0.82 -1.1 2,868,653 + ECD_02724 0.82 +0.0 2,868,653 + ECD_02724 0.82 -0.1 2,868,654 - ECD_02724 0.82 +0.3 2,868,654 - ECD_02724 0.82 +0.0 2,868,773 + ECD_02724 0.89 -1.8 2,868,773 + ECD_02724 0.89 -0.6 2,868,774 - ECD_02724 0.89 -0.5 2,868,774 - ECD_02724 0.89 -0.3 2,868,774 - ECD_02724 0.89 -0.8 2,868,774 - ECD_02724 0.89 -0.3 2,868,825 + -1.2 2,868,825 + -1.4 2,868,825 + -0.5 2,868,825 + +1.6 2,868,825 + -0.9 2,868,826 - -1.3 2,868,826 - -0.5 2,868,826 - -1.5 2,868,826 - -2.4 2,868,832 - -1.1 2,868,879 - -2.6 2,868,879 - +0.8 2,868,881 - -1.6 2,868,881 - +0.6 2,868,953 - -0.2 2,868,953 - -0.4 2,868,953 - -0.0 2,868,953 - -0.7 2,868,953 - -1.5 2,868,953 - +0.6 2,868,973 + -1.1 2,868,974 - +0.5 2,868,974 - -0.9 2,868,977 + +0.1 2,869,108 - ECD_02725 0.19 +0.5 2,869,108 - ECD_02725 0.19 +0.6 2,869,111 + ECD_02725 0.20 +0.6 2,869,111 + ECD_02725 0.20 +0.2 2,869,158 - ECD_02725 0.26 -1.1 2,869,158 - ECD_02725 0.26 +0.4 2,869,208 + ECD_02725 0.33 -1.1 2,869,208 + ECD_02725 0.33 -0.2 2,869,208 + ECD_02725 0.33 -0.1 2,869,209 - ECD_02725 0.33 +0.4 2,869,209 - ECD_02725 0.33 +0.5 2,869,290 - ECD_02725 0.45 -0.1 2,869,291 + ECD_02725 0.45 -0.0 2,869,291 + ECD_02725 0.45 +0.8 2,869,292 - ECD_02725 0.45 -0.2 2,869,292 - ECD_02725 0.45 +0.3 2,869,292 - ECD_02725 0.45 -1.8 2,869,292 - ECD_02725 0.45 -0.4 2,869,334 + ECD_02725 0.51 -0.5 2,869,335 - ECD_02725 0.51 +0.8 2,869,335 - ECD_02725 0.51 -0.5 2,869,335 - ECD_02725 0.51 +0.1 2,869,335 - ECD_02725 0.51 -0.6 2,869,335 - ECD_02725 0.51 -1.0 2,869,335 - ECD_02725 0.51 +0.4 2,869,338 - ECD_02725 0.51 +0.5 2,869,344 - ECD_02725 0.52 +0.6 2,869,379 + ECD_02725 0.57 -0.5 2,869,420 - ECD_02725 0.63 +0.6 2,869,420 - ECD_02725 0.63 -1.1 2,869,461 - ECD_02725 0.69 -0.7 2,869,468 + ECD_02725 0.70 +0.2 2,869,468 + ECD_02725 0.70 +0.1 2,869,468 + ECD_02725 0.70 -0.3 2,869,469 - ECD_02725 0.70 +0.2 2,869,469 - ECD_02725 0.70 -0.1 2,869,469 - ECD_02725 0.70 -0.0 2,869,469 - ECD_02725 0.70 -0.5 2,869,469 - ECD_02725 0.70 +0.1 2,869,469 - ECD_02725 0.70 -0.7 2,869,469 - ECD_02725 0.70 +0.2 2,869,487 + ECD_02725 0.72 +2.6 2,869,487 + ECD_02725 0.72 -0.1 2,869,487 + ECD_02725 0.72 +1.1 2,869,488 - ECD_02725 0.73 +0.1 2,869,488 - ECD_02725 0.73 -1.6 2,869,488 - ECD_02725 0.73 -0.2 2,869,488 - ECD_02725 0.73 +0.5 2,869,488 - ECD_02725 0.73 -2.1 2,869,488 - ECD_02725 0.73 +0.1 2,869,488 - ECD_02725 0.73 +0.8 2,869,488 - ECD_02725 0.73 +0.4 2,869,493 + ECD_02725 0.73 -1.2 2,869,493 + ECD_02725 0.73 -1.3 2,869,510 + ECD_02725 0.76 -1.5 2,869,510 + ECD_02725 0.76 +0.8 2,869,510 + ECD_02725 0.76 -0.2 2,869,511 - ECD_02725 0.76 +0.5 2,869,511 - ECD_02725 0.76 -0.3 2,869,511 - ECD_02725 0.76 +0.8 2,869,511 - ECD_02725 0.76 +0.5 2,869,552 - ECD_02725 0.82 +1.1 2,869,667 + -0.1 2,869,667 + +0.2 2,869,668 - +0.8 2,869,682 + +0.2 2,869,766 + -1.4 2,869,767 - +0.6 2,869,767 - -1.2 2,869,822 - ECD_02726 0.13 -1.1 2,869,839 + ECD_02726 0.15 -0.4 2,869,842 + ECD_02726 0.15 -0.4 2,869,916 - ECD_02726 0.23 +0.6
Or see this region's nucleotide sequence