Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02708 and ECD_02709 are separated by 47 nucleotides ECD_02709 and ECD_02710 are separated by 102 nucleotides
ECD_02708: ECD_02708 - XdhC-CoxI family protein with NAD(P)-binding Rossman fold, at 2,843,476 to 2,845,101
_02708
ECD_02709: ECD_02709 - putative selenium-dependent hydroxylase accessory protein, at 2,845,149 to 2,845,919
_02709
ECD_02710: ECD_02710 - CTP:molybdopterin cytidylyltransferase, at 2,846,022 to 2,846,600
_02710
Position (kb)
2845
2846 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2844.181 kb on - strand, within ECD_02708 at 2844.181 kb on - strand, within ECD_02708 at 2844.181 kb on - strand, within ECD_02708 at 2844.226 kb on - strand, within ECD_02708 at 2844.239 kb on + strand, within ECD_02708 at 2844.239 kb on + strand, within ECD_02708 at 2844.240 kb on - strand, within ECD_02708 at 2844.240 kb on - strand, within ECD_02708 at 2844.248 kb on - strand, within ECD_02708 at 2844.248 kb on - strand, within ECD_02708 at 2844.248 kb on - strand, within ECD_02708 at 2844.358 kb on + strand, within ECD_02708 at 2844.362 kb on - strand, within ECD_02708 at 2844.409 kb on + strand, within ECD_02708 at 2844.409 kb on + strand, within ECD_02708 at 2844.409 kb on + strand, within ECD_02708 at 2844.409 kb on + strand, within ECD_02708 at 2844.409 kb on + strand, within ECD_02708 at 2844.409 kb on + strand, within ECD_02708 at 2844.409 kb on + strand, within ECD_02708 at 2844.410 kb on - strand, within ECD_02708 at 2844.410 kb on - strand, within ECD_02708 at 2844.410 kb on - strand, within ECD_02708 at 2844.410 kb on - strand, within ECD_02708 at 2844.410 kb on - strand, within ECD_02708 at 2844.410 kb on - strand, within ECD_02708 at 2844.410 kb on - strand, within ECD_02708 at 2844.410 kb on - strand, within ECD_02708 at 2844.410 kb on - strand, within ECD_02708 at 2844.410 kb on - strand, within ECD_02708 at 2844.410 kb on - strand, within ECD_02708 at 2844.410 kb on - strand, within ECD_02708 at 2844.416 kb on + strand, within ECD_02708 at 2844.416 kb on + strand, within ECD_02708 at 2844.417 kb on - strand, within ECD_02708 at 2844.434 kb on - strand, within ECD_02708 at 2844.434 kb on - strand, within ECD_02708 at 2844.434 kb on - strand, within ECD_02708 at 2844.434 kb on - strand, within ECD_02708 at 2844.434 kb on - strand, within ECD_02708 at 2844.434 kb on - strand, within ECD_02708 at 2844.434 kb on - strand, within ECD_02708 at 2844.444 kb on + strand, within ECD_02708 at 2844.444 kb on + strand, within ECD_02708 at 2844.444 kb on + strand, within ECD_02708 at 2844.445 kb on - strand, within ECD_02708 at 2844.445 kb on - strand, within ECD_02708 at 2844.445 kb on - strand, within ECD_02708 at 2844.598 kb on - strand, within ECD_02708 at 2844.699 kb on - strand, within ECD_02708 at 2844.703 kb on - strand, within ECD_02708 at 2844.703 kb on - strand, within ECD_02708 at 2844.727 kb on + strand, within ECD_02708 at 2844.813 kb on + strand, within ECD_02708 at 2844.814 kb on - strand, within ECD_02708 at 2844.814 kb on - strand, within ECD_02708 at 2844.818 kb on - strand, within ECD_02708 at 2844.818 kb on - strand, within ECD_02708 at 2844.873 kb on + strand, within ECD_02708 at 2844.874 kb on - strand, within ECD_02708 at 2844.874 kb on - strand, within ECD_02708 at 2844.874 kb on - strand, within ECD_02708 at 2844.874 kb on - strand, within ECD_02708 at 2844.898 kb on - strand, within ECD_02708 at 2844.898 kb on - strand, within ECD_02708 at 2844.898 kb on - strand, within ECD_02708 at 2844.898 kb on - strand, within ECD_02708 at 2844.963 kb on + strand at 2844.964 kb on - strand at 2844.972 kb on + strand at 2844.972 kb on + strand at 2844.973 kb on - strand at 2844.973 kb on - strand at 2845.047 kb on + strand at 2845.095 kb on + strand at 2845.101 kb on + strand at 2845.188 kb on + strand at 2845.188 kb on + strand at 2845.188 kb on + strand at 2845.188 kb on + strand at 2845.188 kb on + strand at 2845.189 kb on - strand at 2845.189 kb on - strand at 2845.189 kb on - strand at 2845.190 kb on + strand at 2845.191 kb on - strand at 2845.212 kb on + strand at 2845.212 kb on + strand at 2845.212 kb on + strand at 2845.213 kb on - strand at 2845.400 kb on + strand, within ECD_02709 at 2845.401 kb on - strand, within ECD_02709 at 2845.401 kb on - strand, within ECD_02709 at 2845.401 kb on - strand, within ECD_02709 at 2845.401 kb on - strand, within ECD_02709 at 2845.457 kb on + strand, within ECD_02709 at 2845.457 kb on + strand, within ECD_02709 at 2845.457 kb on + strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.458 kb on - strand, within ECD_02709 at 2845.570 kb on - strand, within ECD_02709 at 2845.570 kb on - strand, within ECD_02709 at 2845.570 kb on - strand, within ECD_02709 at 2845.570 kb on - strand, within ECD_02709 at 2845.617 kb on - strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.679 kb on + strand, within ECD_02709 at 2845.680 kb on - strand, within ECD_02709 at 2845.680 kb on - strand, within ECD_02709 at 2845.745 kb on + strand, within ECD_02709 at 2845.751 kb on + strand, within ECD_02709 at 2845.751 kb on + strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.752 kb on - strand, within ECD_02709 at 2845.770 kb on + strand, within ECD_02709 at 2845.909 kb on - strand at 2845.959 kb on + strand at 2846.004 kb on - strand at 2846.006 kb on - strand at 2846.006 kb on - strand at 2846.039 kb on + strand at 2846.040 kb on - strand at 2846.040 kb on - strand at 2846.041 kb on + strand at 2846.226 kb on - strand, within ECD_02710 at 2846.257 kb on + strand, within ECD_02710 at 2846.509 kb on - strand, within ECD_02710 at 2846.630 kb on - strand at 2846.896 kb on - strand at 2846.901 kb on + strand at 2846.901 kb on + strand at 2846.901 kb on + strand at 2846.902 kb on - strand at 2846.902 kb on - strand at 2846.902 kb on - strand at 2846.903 kb on + strand at 2846.903 kb on + strand at 2846.903 kb on + strand at 2846.903 kb on + strand at 2846.903 kb on + strand at 2846.904 kb on - strand at 2846.908 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 2,844,181 - ECD_02708 0.43 -1.5 2,844,181 - ECD_02708 0.43 -0.0 2,844,181 - ECD_02708 0.43 +0.5 2,844,226 - ECD_02708 0.46 -1.1 2,844,239 + ECD_02708 0.47 +0.0 2,844,239 + ECD_02708 0.47 +0.2 2,844,240 - ECD_02708 0.47 +0.6 2,844,240 - ECD_02708 0.47 +0.9 2,844,248 - ECD_02708 0.47 -1.7 2,844,248 - ECD_02708 0.47 -1.3 2,844,248 - ECD_02708 0.47 -0.6 2,844,358 + ECD_02708 0.54 +0.1 2,844,362 - ECD_02708 0.54 +0.9 2,844,409 + ECD_02708 0.57 -0.7 2,844,409 + ECD_02708 0.57 +1.0 2,844,409 + ECD_02708 0.57 -0.2 2,844,409 + ECD_02708 0.57 +0.5 2,844,409 + ECD_02708 0.57 +0.6 2,844,409 + ECD_02708 0.57 -0.7 2,844,409 + ECD_02708 0.57 +0.3 2,844,410 - ECD_02708 0.57 +1.7 2,844,410 - ECD_02708 0.57 -0.2 2,844,410 - ECD_02708 0.57 +0.3 2,844,410 - ECD_02708 0.57 -0.3 2,844,410 - ECD_02708 0.57 -0.9 2,844,410 - ECD_02708 0.57 +0.2 2,844,410 - ECD_02708 0.57 +0.8 2,844,410 - ECD_02708 0.57 +0.3 2,844,410 - ECD_02708 0.57 +0.3 2,844,410 - ECD_02708 0.57 +0.3 2,844,410 - ECD_02708 0.57 +0.1 2,844,410 - ECD_02708 0.57 -0.6 2,844,416 + ECD_02708 0.58 -0.1 2,844,416 + ECD_02708 0.58 -0.2 2,844,417 - ECD_02708 0.58 +0.4 2,844,434 - ECD_02708 0.59 +1.2 2,844,434 - ECD_02708 0.59 +0.4 2,844,434 - ECD_02708 0.59 -0.8 2,844,434 - ECD_02708 0.59 -0.3 2,844,434 - ECD_02708 0.59 +1.5 2,844,434 - ECD_02708 0.59 +0.6 2,844,434 - ECD_02708 0.59 -0.6 2,844,444 + ECD_02708 0.60 +0.5 2,844,444 + ECD_02708 0.60 -0.5 2,844,444 + ECD_02708 0.60 +0.4 2,844,445 - ECD_02708 0.60 +0.4 2,844,445 - ECD_02708 0.60 -0.5 2,844,445 - ECD_02708 0.60 -0.0 2,844,598 - ECD_02708 0.69 -0.1 2,844,699 - ECD_02708 0.75 +1.1 2,844,703 - ECD_02708 0.75 +0.1 2,844,703 - ECD_02708 0.75 -0.8 2,844,727 + ECD_02708 0.77 +0.0 2,844,813 + ECD_02708 0.82 +0.3 2,844,814 - ECD_02708 0.82 -0.4 2,844,814 - ECD_02708 0.82 -0.1 2,844,818 - ECD_02708 0.83 -0.8 2,844,818 - ECD_02708 0.83 +0.6 2,844,873 + ECD_02708 0.86 -1.9 2,844,874 - ECD_02708 0.86 -0.4 2,844,874 - ECD_02708 0.86 +0.1 2,844,874 - ECD_02708 0.86 +1.1 2,844,874 - ECD_02708 0.86 +1.5 2,844,898 - ECD_02708 0.87 +0.6 2,844,898 - ECD_02708 0.87 +1.5 2,844,898 - ECD_02708 0.87 +0.2 2,844,898 - ECD_02708 0.87 -1.2 2,844,963 + +0.0 2,844,964 - +0.1 2,844,972 + +0.1 2,844,972 + +1.2 2,844,973 - +0.9 2,844,973 - -0.2 2,845,047 + -0.3 2,845,095 + +0.7 2,845,101 + +1.0 2,845,188 + +1.1 2,845,188 + -1.0 2,845,188 + -0.2 2,845,188 + -0.6 2,845,188 + -0.3 2,845,189 - +0.6 2,845,189 - -0.6 2,845,189 - -0.9 2,845,190 + +1.4 2,845,191 - -0.6 2,845,212 + -0.2 2,845,212 + +0.1 2,845,212 + +1.8 2,845,213 - -1.0 2,845,400 + ECD_02709 0.33 +0.7 2,845,401 - ECD_02709 0.33 -0.2 2,845,401 - ECD_02709 0.33 +1.3 2,845,401 - ECD_02709 0.33 +0.4 2,845,401 - ECD_02709 0.33 +0.8 2,845,457 + ECD_02709 0.40 +1.0 2,845,457 + ECD_02709 0.40 -1.2 2,845,457 + ECD_02709 0.40 +1.1 2,845,458 - ECD_02709 0.40 +1.0 2,845,458 - ECD_02709 0.40 +0.0 2,845,458 - ECD_02709 0.40 +0.7 2,845,458 - ECD_02709 0.40 +0.9 2,845,458 - ECD_02709 0.40 +0.1 2,845,570 - ECD_02709 0.55 +0.1 2,845,570 - ECD_02709 0.55 +0.6 2,845,570 - ECD_02709 0.55 +0.6 2,845,570 - ECD_02709 0.55 +1.2 2,845,617 - ECD_02709 0.61 +0.2 2,845,679 + ECD_02709 0.69 -0.7 2,845,679 + ECD_02709 0.69 +0.3 2,845,679 + ECD_02709 0.69 +0.0 2,845,679 + ECD_02709 0.69 +0.1 2,845,679 + ECD_02709 0.69 -0.6 2,845,679 + ECD_02709 0.69 +1.1 2,845,679 + ECD_02709 0.69 -0.6 2,845,680 - ECD_02709 0.69 +0.6 2,845,680 - ECD_02709 0.69 +0.6 2,845,745 + ECD_02709 0.77 -0.0 2,845,751 + ECD_02709 0.78 -1.8 2,845,751 + ECD_02709 0.78 -1.4 2,845,752 - ECD_02709 0.78 +0.4 2,845,752 - ECD_02709 0.78 +0.2 2,845,752 - ECD_02709 0.78 +0.8 2,845,752 - ECD_02709 0.78 +0.3 2,845,752 - ECD_02709 0.78 -2.7 2,845,752 - ECD_02709 0.78 +0.3 2,845,752 - ECD_02709 0.78 +0.1 2,845,752 - ECD_02709 0.78 -0.4 2,845,752 - ECD_02709 0.78 +0.6 2,845,752 - ECD_02709 0.78 -0.2 2,845,752 - ECD_02709 0.78 +0.2 2,845,752 - ECD_02709 0.78 +0.2 2,845,752 - ECD_02709 0.78 -0.6 2,845,752 - ECD_02709 0.78 +0.2 2,845,752 - ECD_02709 0.78 +0.4 2,845,752 - ECD_02709 0.78 +0.1 2,845,770 + ECD_02709 0.81 +0.9 2,845,909 - -0.7 2,845,959 + +1.3 2,846,004 - -0.5 2,846,006 - +0.2 2,846,006 - -0.0 2,846,039 + +1.0 2,846,040 - +0.1 2,846,040 - -0.3 2,846,041 + +0.2 2,846,226 - ECD_02710 0.35 +0.0 2,846,257 + ECD_02710 0.41 -0.6 2,846,509 - ECD_02710 0.84 +0.4 2,846,630 - +0.6 2,846,896 - +1.0 2,846,901 + +0.4 2,846,901 + -1.5 2,846,901 + -0.2 2,846,902 - +1.1 2,846,902 - +0.5 2,846,902 - -0.9 2,846,903 + +1.2 2,846,903 + +0.0 2,846,903 + +0.2 2,846,903 + -0.2 2,846,903 + -0.2 2,846,904 - -1.2 2,846,908 + +0.1
Or see this region's nucleotide sequence