Strain Fitness in Escherichia coli BL21 around ECD_02508

Experiment: Bas27

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02505 and ECD_02506 are separated by 61 nucleotidesECD_02506 and ECD_02507 overlap by 11 nucleotidesECD_02507 and ECD_02508 are separated by 131 nucleotidesECD_02508 and ECD_02509 are separated by 743 nucleotides ECD_02505: ECD_02505 - lipoprotein component of BamABCDE OM biogenesis complex, at 2,620,007 to 2,620,348 _02505 ECD_02506: ECD_02506 - UPF0125 family protein, at 2,620,410 to 2,620,700 _02506 ECD_02507: ECD_02507 - toxic UPF0083 family protein inhibitor of 70S ribosome formation, at 2,620,690 to 2,621,166 _02507 ECD_02508: ECD_02508 - tmRNA-binding trans-translation protein, at 2,621,298 to 2,621,780 _02508 ECD_02509: ECD_02509 - Fels-2 prophage protein, at 2,622,524 to 2,623,753 _02509 Position (kb) 2621 2622Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2620.316 kb on - strandat 2620.322 kb on - strandat 2620.342 kb on + strandat 2620.346 kb on + strandat 2620.346 kb on + strandat 2620.346 kb on + strandat 2620.346 kb on + strandat 2620.347 kb on - strandat 2620.347 kb on - strandat 2620.349 kb on + strandat 2620.352 kb on + strandat 2620.415 kb on + strandat 2620.416 kb on - strandat 2620.416 kb on - strandat 2620.478 kb on - strand, within ECD_02506at 2620.478 kb on - strand, within ECD_02506at 2620.516 kb on - strand, within ECD_02506at 2620.535 kb on - strand, within ECD_02506at 2620.535 kb on - strand, within ECD_02506at 2620.535 kb on - strand, within ECD_02506at 2620.553 kb on + strand, within ECD_02506at 2620.554 kb on - strand, within ECD_02506at 2620.554 kb on - strand, within ECD_02506at 2620.670 kb on - strand, within ECD_02506at 2620.670 kb on - strand, within ECD_02506at 2620.670 kb on - strand, within ECD_02506at 2620.670 kb on - strand, within ECD_02506at 2620.692 kb on - strandat 2620.692 kb on - strandat 2620.703 kb on + strandat 2620.703 kb on + strandat 2620.703 kb on + strandat 2620.704 kb on - strandat 2620.704 kb on - strandat 2620.740 kb on + strand, within ECD_02507at 2620.741 kb on - strand, within ECD_02507at 2620.791 kb on + strand, within ECD_02507at 2620.908 kb on + strand, within ECD_02507at 2620.909 kb on - strand, within ECD_02507at 2621.158 kb on + strandat 2621.158 kb on + strandat 2621.158 kb on + strandat 2621.158 kb on + strandat 2621.159 kb on - strandat 2621.159 kb on - strandat 2621.159 kb on - strandat 2621.161 kb on + strandat 2621.168 kb on + strandat 2621.179 kb on - strandat 2621.222 kb on + strandat 2621.222 kb on + strandat 2621.222 kb on + strandat 2621.227 kb on + strandat 2621.227 kb on + strandat 2621.297 kb on + strandat 2621.297 kb on + strandat 2621.318 kb on + strandat 2621.318 kb on + strandat 2621.318 kb on + strandat 2621.368 kb on - strand, within ECD_02508at 2621.460 kb on + strand, within ECD_02508at 2621.460 kb on + strand, within ECD_02508at 2621.460 kb on + strand, within ECD_02508at 2621.461 kb on - strand, within ECD_02508at 2621.623 kb on - strand, within ECD_02508at 2621.623 kb on - strand, within ECD_02508at 2621.756 kb on + strandat 2621.757 kb on - strandat 2621.795 kb on + strandat 2621.795 kb on + strandat 2621.795 kb on + strandat 2621.795 kb on + strandat 2621.796 kb on - strandat 2621.848 kb on + strandat 2621.848 kb on + strandat 2621.849 kb on - strandat 2621.911 kb on + strandat 2621.922 kb on + strandat 2621.977 kb on + strandat 2621.977 kb on + strandat 2621.977 kb on + strandat 2621.977 kb on + strandat 2621.977 kb on + strandat 2621.977 kb on + strandat 2621.977 kb on + strandat 2621.977 kb on + strandat 2621.977 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.981 kb on + strandat 2621.987 kb on + strandat 2621.987 kb on + strandat 2621.987 kb on + strandat 2621.987 kb on + strandat 2621.987 kb on + strandat 2621.987 kb on + strandat 2622.099 kb on + strandat 2622.106 kb on + strandat 2622.106 kb on + strandat 2622.106 kb on + strandat 2622.106 kb on + strandat 2622.106 kb on + strandat 2622.114 kb on + strandat 2622.114 kb on + strandat 2622.114 kb on + strandat 2622.114 kb on + strandat 2622.114 kb on + strandat 2622.115 kb on + strandat 2622.117 kb on + strandat 2622.117 kb on + strandat 2622.126 kb on + strandat 2622.126 kb on + strandat 2622.126 kb on + strandat 2622.224 kb on + strandat 2622.231 kb on + strandat 2622.231 kb on + strandat 2622.231 kb on + strandat 2622.231 kb on + strandat 2622.231 kb on + strandat 2622.240 kb on + strandat 2622.240 kb on + strandat 2622.240 kb on + strandat 2622.240 kb on + strandat 2622.240 kb on + strandat 2622.240 kb on + strandat 2622.281 kb on + strandat 2622.294 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.302 kb on + strandat 2622.391 kb on + strandat 2622.432 kb on - strandat 2622.436 kb on + strandat 2622.437 kb on - strandat 2622.671 kb on + strand, within ECD_02509at 2622.671 kb on + strand, within ECD_02509at 2622.700 kb on + strand, within ECD_02509at 2622.701 kb on - strand, within ECD_02509at 2622.701 kb on - strand, within ECD_02509at 2622.730 kb on + strand, within ECD_02509at 2622.731 kb on - strand, within ECD_02509at 2622.731 kb on - strand, within ECD_02509at 2622.754 kb on - strand, within ECD_02509at 2622.764 kb on + strand, within ECD_02509at 2622.765 kb on - strand, within ECD_02509at 2622.765 kb on - strand, within ECD_02509at 2622.765 kb on - strand, within ECD_02509at 2622.765 kb on - strand, within ECD_02509at 2622.765 kb on - strand, within ECD_02509at 2622.778 kb on + strand, within ECD_02509at 2622.779 kb on - strand, within ECD_02509

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas27
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2,620,316 - +2.0
2,620,322 - +1.1
2,620,342 + +0.6
2,620,346 + +0.8
2,620,346 + +0.3
2,620,346 + +0.5
2,620,346 + -0.6
2,620,347 - -1.0
2,620,347 - -1.2
2,620,349 + -1.1
2,620,352 + +0.2
2,620,415 + +0.1
2,620,416 - -0.8
2,620,416 - -0.8
2,620,478 - ECD_02506 0.23 -1.0
2,620,478 - ECD_02506 0.23 -1.1
2,620,516 - ECD_02506 0.36 +0.8
2,620,535 - ECD_02506 0.43 -1.2
2,620,535 - ECD_02506 0.43 +0.1
2,620,535 - ECD_02506 0.43 +0.1
2,620,553 + ECD_02506 0.49 +0.9
2,620,554 - ECD_02506 0.49 +0.5
2,620,554 - ECD_02506 0.49 -0.7
2,620,670 - ECD_02506 0.89 +1.6
2,620,670 - ECD_02506 0.89 -0.8
2,620,670 - ECD_02506 0.89 -1.7
2,620,670 - ECD_02506 0.89 -1.5
2,620,692 - +1.8
2,620,692 - -0.2
2,620,703 + -2.2
2,620,703 + +0.7
2,620,703 + -0.1
2,620,704 - -1.7
2,620,704 - -0.7
2,620,740 + ECD_02507 0.10 -0.8
2,620,741 - ECD_02507 0.11 +1.6
2,620,791 + ECD_02507 0.21 -0.0
2,620,908 + ECD_02507 0.46 -0.6
2,620,909 - ECD_02507 0.46 -1.2
2,621,158 + -0.9
2,621,158 + -2.0
2,621,158 + -0.2
2,621,158 + -0.7
2,621,159 - -1.0
2,621,159 - +0.2
2,621,159 - +0.9
2,621,161 + -0.4
2,621,168 + +0.6
2,621,179 - +1.7
2,621,222 + +0.4
2,621,222 + -0.1
2,621,222 + -0.6
2,621,227 + -0.4
2,621,227 + -0.5
2,621,297 + +0.8
2,621,297 + +0.1
2,621,318 + -1.1
2,621,318 + +0.8
2,621,318 + -0.7
2,621,368 - ECD_02508 0.14 -0.7
2,621,460 + ECD_02508 0.34 -1.8
2,621,460 + ECD_02508 0.34 -0.9
2,621,460 + ECD_02508 0.34 -0.4
2,621,461 - ECD_02508 0.34 +1.6
2,621,623 - ECD_02508 0.67 +1.4
2,621,623 - ECD_02508 0.67 -0.4
2,621,756 + +1.0
2,621,757 - +1.2
2,621,795 + -0.4
2,621,795 + +1.8
2,621,795 + -0.4
2,621,795 + +0.6
2,621,796 - +0.2
2,621,848 + +1.7
2,621,848 + -0.0
2,621,849 - +0.6
2,621,911 + -0.8
2,621,922 + -0.1
2,621,977 + -1.2
2,621,977 + +0.3
2,621,977 + -1.7
2,621,977 + +0.7
2,621,977 + -0.3
2,621,977 + -0.4
2,621,977 + -0.1
2,621,977 + -0.4
2,621,977 + +0.3
2,621,981 + +0.2
2,621,981 + -0.6
2,621,981 + -0.6
2,621,981 + -0.5
2,621,981 + -1.3
2,621,981 + +0.2
2,621,981 + -1.3
2,621,981 + -1.0
2,621,981 + +0.0
2,621,981 + -0.2
2,621,981 + -0.4
2,621,981 + -1.7
2,621,981 + +0.3
2,621,981 + -0.1
2,621,981 + -1.4
2,621,981 + -0.2
2,621,981 + -1.7
2,621,981 + +0.2
2,621,987 + -1.5
2,621,987 + -0.2
2,621,987 + +0.2
2,621,987 + -1.3
2,621,987 + +0.9
2,621,987 + -0.3
2,622,099 + -0.0
2,622,106 + +0.8
2,622,106 + -0.5
2,622,106 + -0.3
2,622,106 + -0.6
2,622,106 + -1.3
2,622,114 + +0.3
2,622,114 + -0.9
2,622,114 + -0.5
2,622,114 + -2.1
2,622,114 + -1.8
2,622,115 + -0.9
2,622,117 + -1.1
2,622,117 + -0.3
2,622,126 + -0.1
2,622,126 + -2.2
2,622,126 + -1.2
2,622,224 + +0.7
2,622,231 + -0.7
2,622,231 + -2.3
2,622,231 + -0.7
2,622,231 + -0.2
2,622,231 + -1.0
2,622,240 + -0.6
2,622,240 + -0.5
2,622,240 + -0.3
2,622,240 + +0.3
2,622,240 + -0.3
2,622,240 + -0.6
2,622,281 + -1.3
2,622,294 + +0.7
2,622,302 + -2.0
2,622,302 + -0.5
2,622,302 + -2.5
2,622,302 + +0.2
2,622,302 + -2.8
2,622,302 + -0.4
2,622,302 + -0.2
2,622,302 + -0.8
2,622,302 + -1.6
2,622,302 + -1.7
2,622,302 + -1.1
2,622,302 + +0.0
2,622,302 + +0.1
2,622,302 + -0.5
2,622,302 + +0.6
2,622,302 + -1.6
2,622,302 + -1.0
2,622,302 + +0.1
2,622,302 + -0.5
2,622,302 + -3.0
2,622,302 + -0.8
2,622,302 + -0.2
2,622,302 + -0.6
2,622,302 + -0.1
2,622,302 + +1.0
2,622,302 + +0.6
2,622,302 + +0.6
2,622,302 + -0.4
2,622,302 + -1.7
2,622,302 + -0.0
2,622,302 + +0.1
2,622,302 + -0.9
2,622,302 + -0.1
2,622,302 + +0.0
2,622,302 + -0.5
2,622,302 + -1.6
2,622,302 + -1.1
2,622,302 + -0.6
2,622,302 + -0.5
2,622,302 + -0.7
2,622,302 + -0.5
2,622,302 + -1.3
2,622,391 + +0.2
2,622,432 - -0.2
2,622,436 + +0.1
2,622,437 - -0.5
2,622,671 + ECD_02509 0.12 -1.4
2,622,671 + ECD_02509 0.12 +0.0
2,622,700 + ECD_02509 0.14 -0.3
2,622,701 - ECD_02509 0.14 +0.4
2,622,701 - ECD_02509 0.14 +0.2
2,622,730 + ECD_02509 0.17 -0.9
2,622,731 - ECD_02509 0.17 -0.0
2,622,731 - ECD_02509 0.17 -1.5
2,622,754 - ECD_02509 0.19 -1.4
2,622,764 + ECD_02509 0.20 +0.8
2,622,765 - ECD_02509 0.20 +0.5
2,622,765 - ECD_02509 0.20 -2.0
2,622,765 - ECD_02509 0.20 -0.2
2,622,765 - ECD_02509 0.20 +0.9
2,622,765 - ECD_02509 0.20 +0.5
2,622,778 + ECD_02509 0.21 -0.4
2,622,779 - ECD_02509 0.21 -0.2

Or see this region's nucleotide sequence