Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02476 and ECD_02477 are separated by 68 nucleotides ECD_02477 and ECD_02478 are separated by 31 nucleotides ECD_02478 and ECD_02479 are separated by 113 nucleotides
ECD_02476: ECD_02476 - thioredoxin 2, at 2,585,335 to 2,585,754
_02476
ECD_02477: ECD_02477 - DTW domain protein, at 2,585,823 to 2,586,521
_02477
ECD_02478: ECD_02478 - protein lysine acetyltransferase, at 2,586,553 to 2,589,213
_02478
ECD_02479: ECD_02479 - phosphatidylserine synthase; CDP-diacylglycerol-serine O-phosphatidyltransferase, at 2,589,327 to 2,590,682
_02479
Position (kb)
2586
2587
2588
2589
2590 Strain fitness (log2 ratio)
-1
0
1 at 2585.649 kb on + strand, within ECD_02476 at 2585.649 kb on + strand, within ECD_02476 at 2585.653 kb on - strand, within ECD_02476 at 2585.752 kb on + strand at 2585.822 kb on + strand at 2585.960 kb on + strand, within ECD_02477 at 2586.162 kb on + strand, within ECD_02477 at 2586.221 kb on + strand, within ECD_02477 at 2586.459 kb on + strand at 2586.508 kb on + strand at 2586.776 kb on + strand at 2586.776 kb on + strand at 2586.780 kb on + strand at 2586.780 kb on + strand at 2586.780 kb on + strand at 2586.780 kb on + strand at 2586.807 kb on + strand at 2586.904 kb on - strand, within ECD_02478 at 2587.185 kb on - strand, within ECD_02478 at 2587.185 kb on - strand, within ECD_02478 at 2587.264 kb on - strand, within ECD_02478 at 2587.564 kb on - strand, within ECD_02478 at 2587.603 kb on + strand, within ECD_02478 at 2587.604 kb on - strand, within ECD_02478 at 2587.745 kb on - strand, within ECD_02478 at 2587.745 kb on - strand, within ECD_02478 at 2587.802 kb on + strand, within ECD_02478 at 2587.828 kb on + strand, within ECD_02478 at 2587.866 kb on + strand, within ECD_02478 at 2588.082 kb on - strand, within ECD_02478 at 2588.086 kb on - strand, within ECD_02478 at 2588.086 kb on - strand, within ECD_02478 at 2588.086 kb on - strand, within ECD_02478 at 2588.086 kb on - strand, within ECD_02478 at 2588.136 kb on + strand, within ECD_02478 at 2588.174 kb on - strand, within ECD_02478 at 2588.809 kb on + strand, within ECD_02478 at 2588.838 kb on + strand, within ECD_02478 at 2588.910 kb on + strand, within ECD_02478 at 2588.910 kb on + strand, within ECD_02478 at 2589.020 kb on + strand at 2589.020 kb on + strand at 2589.052 kb on + strand at 2589.072 kb on - strand at 2589.090 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 2,585,649 + ECD_02476 0.75 +0.8 2,585,649 + ECD_02476 0.75 +1.2 2,585,653 - ECD_02476 0.76 +0.6 2,585,752 + +0.4 2,585,822 + -0.4 2,585,960 + ECD_02477 0.20 +0.6 2,586,162 + ECD_02477 0.48 -0.1 2,586,221 + ECD_02477 0.57 -0.4 2,586,459 + -0.3 2,586,508 + +0.3 2,586,776 + -0.6 2,586,776 + -0.4 2,586,780 + +1.4 2,586,780 + +0.6 2,586,780 + -0.7 2,586,780 + -0.2 2,586,807 + +0.1 2,586,904 - ECD_02478 0.13 +0.1 2,587,185 - ECD_02478 0.24 -0.2 2,587,185 - ECD_02478 0.24 +0.7 2,587,264 - ECD_02478 0.27 +0.1 2,587,564 - ECD_02478 0.38 -0.2 2,587,603 + ECD_02478 0.39 -1.6 2,587,604 - ECD_02478 0.39 -0.9 2,587,745 - ECD_02478 0.45 -0.8 2,587,745 - ECD_02478 0.45 -0.3 2,587,802 + ECD_02478 0.47 +0.1 2,587,828 + ECD_02478 0.48 +0.4 2,587,866 + ECD_02478 0.49 +1.0 2,588,082 - ECD_02478 0.57 -1.2 2,588,086 - ECD_02478 0.58 +0.7 2,588,086 - ECD_02478 0.58 +0.2 2,588,086 - ECD_02478 0.58 -1.1 2,588,086 - ECD_02478 0.58 -0.8 2,588,136 + ECD_02478 0.59 -1.5 2,588,174 - ECD_02478 0.61 +0.5 2,588,809 + ECD_02478 0.85 -0.1 2,588,838 + ECD_02478 0.86 +0.3 2,588,910 + ECD_02478 0.89 -0.5 2,588,910 + ECD_02478 0.89 -1.5 2,589,020 + +0.0 2,589,020 + -0.1 2,589,052 + -1.0 2,589,072 - -0.0 2,589,090 + +0.3
Or see this region's nucleotide sequence