Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02422 and ECD_02423 are separated by 111 nucleotides ECD_02423 and ECD_02424 are separated by 451 nucleotides
ECD_02422: ECD_02422 - cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent, at 2,526,122 to 2,527,336
_02422
ECD_02423: ECD_02423 - isc operon transcriptional repressor; suf operon transcriptional activator; oxidative stress- and iron starvation-inducible; autorepressor, at 2,527,448 to 2,527,936
_02423
ECD_02424: ECD_02424 - tRNA mC32,mU32 2'-O-methyltransferase, SAM-dependent, at 2,528,388 to 2,529,128
_02424
Position (kb)
2527
2528 Strain fitness (log2 ratio)
-1
0
1 at 2527.463 kb on - strand at 2527.508 kb on - strand, within ECD_02423 at 2527.565 kb on - strand, within ECD_02423 at 2527.565 kb on - strand, within ECD_02423 at 2527.565 kb on - strand, within ECD_02423 at 2527.565 kb on - strand, within ECD_02423 at 2527.565 kb on - strand, within ECD_02423 at 2527.701 kb on - strand, within ECD_02423 at 2527.764 kb on - strand, within ECD_02423 at 2527.816 kb on - strand, within ECD_02423 at 2527.912 kb on - strand at 2527.942 kb on - strand at 2527.942 kb on - strand at 2527.942 kb on - strand at 2528.002 kb on - strand at 2528.068 kb on - strand at 2528.068 kb on - strand at 2528.071 kb on + strand at 2528.156 kb on - strand at 2528.156 kb on - strand at 2528.162 kb on + strand at 2528.163 kb on - strand at 2528.402 kb on + strand at 2528.409 kb on - strand at 2528.424 kb on - strand at 2528.424 kb on - strand at 2528.570 kb on - strand, within ECD_02424 at 2528.668 kb on + strand, within ECD_02424 at 2528.811 kb on - strand, within ECD_02424 at 2528.936 kb on + strand, within ECD_02424
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 2,527,463 - +0.1 2,527,508 - ECD_02423 0.12 +1.1 2,527,565 - ECD_02423 0.24 -0.2 2,527,565 - ECD_02423 0.24 -0.4 2,527,565 - ECD_02423 0.24 -1.3 2,527,565 - ECD_02423 0.24 -0.9 2,527,565 - ECD_02423 0.24 -0.0 2,527,701 - ECD_02423 0.52 +1.4 2,527,764 - ECD_02423 0.65 -1.2 2,527,816 - ECD_02423 0.75 -1.1 2,527,912 - -0.6 2,527,942 - +1.4 2,527,942 - -0.7 2,527,942 - -0.1 2,528,002 - -1.3 2,528,068 - +0.6 2,528,068 - -0.0 2,528,071 + -0.7 2,528,156 - +0.6 2,528,156 - +0.2 2,528,162 + +0.3 2,528,163 - -1.7 2,528,402 + +1.3 2,528,409 - -0.1 2,528,424 - +0.2 2,528,424 - +0.0 2,528,570 - ECD_02424 0.25 +0.4 2,528,668 + ECD_02424 0.38 -0.3 2,528,811 - ECD_02424 0.57 +0.4 2,528,936 + ECD_02424 0.74 +0.7
Or see this region's nucleotide sequence