Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02363 and ECD_02364 are separated by 27 nucleotides ECD_02364 and ECD_02365 are separated by 109 nucleotides ECD_02365 and ECD_02366 are separated by 73 nucleotides
ECD_02363: ECD_02363 - N-succinyl-diaminopimelate deacylase, at 2,456,096 to 2,457,223
_02363
ECD_02364: ECD_02364 - putative membrane protein, UPF0370 family, at 2,457,251 to 2,457,451
_02364
ECD_02365: ECD_02365 - palmitoyl-CoA esterase activity, uncertain physiological substrate, at 2,457,561 to 2,458,259
_02365
ECD_02366: ECD_02366 - elongator methionine tRNA (ac4C34) acetyltransferase, at 2,458,333 to 2,460,348
_02366
Position (kb)
2457
2458
2459 Strain fitness (log2 ratio)
-1
0
1 at 2457.246 kb on + strand at 2457.246 kb on + strand at 2457.247 kb on - strand at 2457.346 kb on + strand, within ECD_02364 at 2457.449 kb on + strand at 2457.538 kb on + strand at 2457.551 kb on - strand at 2457.597 kb on - strand at 2457.607 kb on - strand at 2457.638 kb on + strand, within ECD_02365 at 2457.640 kb on + strand, within ECD_02365 at 2457.858 kb on - strand, within ECD_02365 at 2457.897 kb on - strand, within ECD_02365 at 2458.343 kb on - strand at 2458.392 kb on + strand at 2458.392 kb on + strand at 2458.471 kb on - strand at 2458.471 kb on - strand at 2458.474 kb on + strand at 2458.475 kb on - strand at 2458.565 kb on - strand, within ECD_02366 at 2458.775 kb on + strand, within ECD_02366 at 2458.776 kb on - strand, within ECD_02366 at 2458.899 kb on + strand, within ECD_02366 at 2458.921 kb on - strand, within ECD_02366 at 2459.248 kb on + strand, within ECD_02366
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 2,457,246 + -0.2 2,457,246 + +0.2 2,457,247 - -1.7 2,457,346 + ECD_02364 0.47 -0.2 2,457,449 + -0.0 2,457,538 + -0.1 2,457,551 - -0.4 2,457,597 - -0.2 2,457,607 - -0.8 2,457,638 + ECD_02365 0.11 -0.2 2,457,640 + ECD_02365 0.11 -0.1 2,457,858 - ECD_02365 0.42 -0.6 2,457,897 - ECD_02365 0.48 -0.0 2,458,343 - +0.0 2,458,392 + +1.2 2,458,392 + +0.0 2,458,471 - -0.8 2,458,471 - +0.5 2,458,474 + -0.8 2,458,475 - +0.4 2,458,565 - ECD_02366 0.12 +0.2 2,458,775 + ECD_02366 0.22 +0.2 2,458,776 - ECD_02366 0.22 +0.1 2,458,899 + ECD_02366 0.28 +0.5 2,458,921 - ECD_02366 0.29 +0.6 2,459,248 + ECD_02366 0.45 -1.1
Or see this region's nucleotide sequence