Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02318 and ECD_02319 are separated by 104 nucleotides ECD_02319 and ECD_02320 are separated by 32 nucleotides ECD_02320 and ECD_02321 are separated by 204 nucleotides
ECD_02318: ECD_02318 - pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase, at 2,408,773 to 2,409,624
_02318
ECD_02319: ECD_02319 - uncharacterized protein, at 2,409,729 to 2,410,103
_02319
ECD_02320: ECD_02320 - WGR domain protein, at 2,410,136 to 2,410,870
_02320
ECD_02321: ECD_02321 - cysteine synthase B (O-acetylserine sulfhydrolase B), at 2,411,075 to 2,411,986
_02321
Position (kb)
2410
2411 Strain fitness (log2 ratio)
-1
0
1 at 2409.148 kb on - strand, within ECD_02318 at 2409.339 kb on - strand, within ECD_02318 at 2409.592 kb on - strand at 2409.723 kb on - strand at 2409.764 kb on - strand at 2409.882 kb on - strand, within ECD_02319 at 2410.002 kb on + strand, within ECD_02319 at 2410.002 kb on + strand, within ECD_02319 at 2410.002 kb on + strand, within ECD_02319 at 2410.002 kb on + strand, within ECD_02319 at 2410.002 kb on + strand, within ECD_02319 at 2410.004 kb on + strand, within ECD_02319 at 2410.004 kb on + strand, within ECD_02319 at 2410.004 kb on + strand, within ECD_02319 at 2410.052 kb on - strand, within ECD_02319 at 2410.060 kb on + strand, within ECD_02319 at 2410.132 kb on + strand at 2410.204 kb on + strand at 2410.445 kb on + strand, within ECD_02320 at 2410.446 kb on - strand, within ECD_02320 at 2410.595 kb on + strand, within ECD_02320 at 2410.644 kb on + strand, within ECD_02320 at 2411.067 kb on - strand at 2411.131 kb on - strand at 2411.131 kb on - strand at 2411.159 kb on + strand at 2411.180 kb on - strand, within ECD_02321 at 2411.237 kb on + strand, within ECD_02321 at 2411.528 kb on - strand, within ECD_02321 at 2411.536 kb on - strand, within ECD_02321
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 2,409,148 - ECD_02318 0.44 +0.8 2,409,339 - ECD_02318 0.66 -0.1 2,409,592 - +0.1 2,409,723 - +0.2 2,409,764 - +0.1 2,409,882 - ECD_02319 0.41 +1.1 2,410,002 + ECD_02319 0.73 +0.3 2,410,002 + ECD_02319 0.73 +0.4 2,410,002 + ECD_02319 0.73 -0.1 2,410,002 + ECD_02319 0.73 -0.6 2,410,002 + ECD_02319 0.73 -0.0 2,410,004 + ECD_02319 0.73 -1.5 2,410,004 + ECD_02319 0.73 -0.1 2,410,004 + ECD_02319 0.73 -1.0 2,410,052 - ECD_02319 0.86 +1.6 2,410,060 + ECD_02319 0.88 +0.5 2,410,132 + +0.5 2,410,204 + +1.0 2,410,445 + ECD_02320 0.42 -0.8 2,410,446 - ECD_02320 0.42 -0.4 2,410,595 + ECD_02320 0.62 -1.5 2,410,644 + ECD_02320 0.69 -0.7 2,411,067 - -0.4 2,411,131 - -0.1 2,411,131 - +0.1 2,411,159 + -0.3 2,411,180 - ECD_02321 0.12 -0.2 2,411,237 + ECD_02321 0.18 +0.7 2,411,528 - ECD_02321 0.50 -0.3 2,411,536 - ECD_02321 0.51 -0.4
Or see this region's nucleotide sequence