Strain Fitness in Escherichia coli BL21 around ECD_02320

Experiment: Bas27

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02318 and ECD_02319 are separated by 104 nucleotidesECD_02319 and ECD_02320 are separated by 32 nucleotidesECD_02320 and ECD_02321 are separated by 204 nucleotides ECD_02318: ECD_02318 - pyridoxal-pyridoxamine kinase/hydroxymethylpyrimidine kinase, at 2,408,773 to 2,409,624 _02318 ECD_02319: ECD_02319 - uncharacterized protein, at 2,409,729 to 2,410,103 _02319 ECD_02320: ECD_02320 - WGR domain protein, at 2,410,136 to 2,410,870 _02320 ECD_02321: ECD_02321 - cysteine synthase B (O-acetylserine sulfhydrolase B), at 2,411,075 to 2,411,986 _02321 Position (kb) 2410 2411Strain fitness (log2 ratio) -1 0 1at 2409.148 kb on - strand, within ECD_02318at 2409.339 kb on - strand, within ECD_02318at 2409.592 kb on - strandat 2409.723 kb on - strandat 2409.764 kb on - strandat 2409.882 kb on - strand, within ECD_02319at 2410.002 kb on + strand, within ECD_02319at 2410.002 kb on + strand, within ECD_02319at 2410.002 kb on + strand, within ECD_02319at 2410.002 kb on + strand, within ECD_02319at 2410.002 kb on + strand, within ECD_02319at 2410.004 kb on + strand, within ECD_02319at 2410.004 kb on + strand, within ECD_02319at 2410.004 kb on + strand, within ECD_02319at 2410.052 kb on - strand, within ECD_02319at 2410.060 kb on + strand, within ECD_02319at 2410.132 kb on + strandat 2410.204 kb on + strandat 2410.445 kb on + strand, within ECD_02320at 2410.446 kb on - strand, within ECD_02320at 2410.595 kb on + strand, within ECD_02320at 2410.644 kb on + strand, within ECD_02320at 2411.067 kb on - strandat 2411.131 kb on - strandat 2411.131 kb on - strandat 2411.159 kb on + strandat 2411.180 kb on - strand, within ECD_02321at 2411.237 kb on + strand, within ECD_02321at 2411.528 kb on - strand, within ECD_02321at 2411.536 kb on - strand, within ECD_02321

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas27
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2,409,148 - ECD_02318 0.44 +0.8
2,409,339 - ECD_02318 0.66 -0.1
2,409,592 - +0.1
2,409,723 - +0.2
2,409,764 - +0.1
2,409,882 - ECD_02319 0.41 +1.1
2,410,002 + ECD_02319 0.73 +0.3
2,410,002 + ECD_02319 0.73 +0.4
2,410,002 + ECD_02319 0.73 -0.1
2,410,002 + ECD_02319 0.73 -0.6
2,410,002 + ECD_02319 0.73 -0.0
2,410,004 + ECD_02319 0.73 -1.5
2,410,004 + ECD_02319 0.73 -0.1
2,410,004 + ECD_02319 0.73 -1.0
2,410,052 - ECD_02319 0.86 +1.6
2,410,060 + ECD_02319 0.88 +0.5
2,410,132 + +0.5
2,410,204 + +1.0
2,410,445 + ECD_02320 0.42 -0.8
2,410,446 - ECD_02320 0.42 -0.4
2,410,595 + ECD_02320 0.62 -1.5
2,410,644 + ECD_02320 0.69 -0.7
2,411,067 - -0.4
2,411,131 - -0.1
2,411,131 - +0.1
2,411,159 + -0.3
2,411,180 - ECD_02321 0.12 -0.2
2,411,237 + ECD_02321 0.18 +0.7
2,411,528 - ECD_02321 0.50 -0.3
2,411,536 - ECD_02321 0.51 -0.4

Or see this region's nucleotide sequence