Strain Fitness in Escherichia coli BL21 around ECD_02204

Experiment: Bas27

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02203 and ECD_02204 overlap by 4 nucleotidesECD_02204 and ECD_02205 overlap by 4 nucleotidesECD_02205 and ECD_02206 are separated by 11 nucleotides ECD_02203: ECD_02203 - NADH:ubiquinone oxidoreductase, membrane subunit L, at 2,280,457 to 2,282,298 _02203 ECD_02204: ECD_02204 - NADH:ubiquinone oxidoreductase, membrane subunit K, at 2,282,295 to 2,282,597 _02204 ECD_02205: ECD_02205 - NADH:ubiquinone oxidoreductase, membrane subunit J, at 2,282,594 to 2,283,148 _02205 ECD_02206: ECD_02206 - NADH:ubiquinone oxidoreductase, chain I, at 2,283,160 to 2,283,702 _02206 Position (kb) 2282 2283Strain fitness (log2 ratio) -2 -1 0 1at 2281.346 kb on + strand, within ECD_02203at 2281.366 kb on - strand, within ECD_02203at 2281.734 kb on - strand, within ECD_02203at 2281.827 kb on - strand, within ECD_02203at 2281.829 kb on + strand, within ECD_02203at 2281.881 kb on - strand, within ECD_02203at 2281.881 kb on - strand, within ECD_02203at 2281.980 kb on + strand, within ECD_02203at 2281.982 kb on + strand, within ECD_02203at 2281.982 kb on + strand, within ECD_02203at 2281.983 kb on - strand, within ECD_02203at 2281.983 kb on - strand, within ECD_02203at 2281.983 kb on - strand, within ECD_02203at 2281.995 kb on - strand, within ECD_02203at 2282.067 kb on + strand, within ECD_02203at 2282.121 kb on - strandat 2282.121 kb on - strandat 2282.414 kb on - strand, within ECD_02204at 2282.414 kb on - strand, within ECD_02204at 2282.713 kb on + strand, within ECD_02205at 2282.713 kb on + strand, within ECD_02205at 2282.713 kb on + strand, within ECD_02205at 2282.714 kb on - strand, within ECD_02205at 2282.714 kb on - strand, within ECD_02205at 2282.755 kb on + strand, within ECD_02205at 2282.759 kb on - strand, within ECD_02205at 2282.771 kb on - strand, within ECD_02205at 2283.004 kb on - strand, within ECD_02205at 2283.050 kb on - strand, within ECD_02205at 2283.110 kb on + strandat 2283.131 kb on - strandat 2283.258 kb on + strand, within ECD_02206at 2283.261 kb on - strand, within ECD_02206at 2283.309 kb on - strand, within ECD_02206at 2283.330 kb on - strand, within ECD_02206at 2283.561 kb on + strand, within ECD_02206

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas27
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2,281,346 + ECD_02203 0.48 -0.8
2,281,366 - ECD_02203 0.49 -0.8
2,281,734 - ECD_02203 0.69 -0.9
2,281,827 - ECD_02203 0.74 -1.6
2,281,829 + ECD_02203 0.74 -0.5
2,281,881 - ECD_02203 0.77 -0.5
2,281,881 - ECD_02203 0.77 +0.5
2,281,980 + ECD_02203 0.83 -1.0
2,281,982 + ECD_02203 0.83 -1.3
2,281,982 + ECD_02203 0.83 -1.1
2,281,983 - ECD_02203 0.83 -0.7
2,281,983 - ECD_02203 0.83 -1.1
2,281,983 - ECD_02203 0.83 -1.4
2,281,995 - ECD_02203 0.83 -0.1
2,282,067 + ECD_02203 0.87 +0.6
2,282,121 - +0.3
2,282,121 - -0.3
2,282,414 - ECD_02204 0.39 -0.3
2,282,414 - ECD_02204 0.39 -1.9
2,282,713 + ECD_02205 0.21 -0.8
2,282,713 + ECD_02205 0.21 -1.4
2,282,713 + ECD_02205 0.21 -0.8
2,282,714 - ECD_02205 0.22 -0.9
2,282,714 - ECD_02205 0.22 -1.6
2,282,755 + ECD_02205 0.29 -0.3
2,282,759 - ECD_02205 0.30 -1.8
2,282,771 - ECD_02205 0.32 -1.7
2,283,004 - ECD_02205 0.74 -0.4
2,283,050 - ECD_02205 0.82 -2.7
2,283,110 + -0.7
2,283,131 - -1.0
2,283,258 + ECD_02206 0.18 -1.0
2,283,261 - ECD_02206 0.19 -1.0
2,283,309 - ECD_02206 0.27 -1.5
2,283,330 - ECD_02206 0.31 -2.2
2,283,561 + ECD_02206 0.74 -0.9

Or see this region's nucleotide sequence